MU55803 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU55803
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Rho-like GTP-binding protein
Location	chr6 : 2239947 .. 2242039 (+)
Sequence length	838

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

AATTCGATTTCCTCAACAATTCATCCTCTCTTTGATTCATCTTTCTCTCTGTGGGGTTGCCTTCTGTTTCCCTTTTTCCCTTCTCTCACACCTCAATTTCAACCCCATTTTCACCAATCAATGCTTCTTTTTCTTTCTCATACCCTTTTTCAACCCTTCTTCCCACTTTTTTGTCCATCTTTTCCTCTCAATTCTCTCTATTTCCTCTTCCAAACATGCCATTCTAGGGTTTTAATCCACATTACCTGTTCTTTCTTCAAATTCCGTTCAAAAAACAATCGTTTATGGCCGCCGCTGCTCCTACGGCGGCTACAAAGTTCATCAAGTGCGTCACGGTTGGAGATGGCGCTGTTGGGAAGACTTGTCTTCTCATTTCTTACACTAGCAACACTTTTCCGACTGATTATGTTCCTACCGTCTTTGACAATTTCAGCGCCAATGTTTTGGTTAATGGACAGTCTGTGAATTTGGGTCTCTGGGACACTGCTGGTCAAGAAGATTATAGCAGGCTAAGGCCTTTGAGTTACAGAGGTGCTGATGTTTTCCTTCTTGCCTTTTCGACTATAAGTCGGGCCAGCTTTGAAAATATATCAAAGAAATGGATCCCAGAGTTAAGGCATTATGCCCCATCAGTGCCCATTATTCTTGTAGGGACCAAACTAGGGGAAGATAATTCTTGCAGCTCCTATTCACCCCCCACCCGCCCCTACCCCACAAATCTGTTCTTTGCATTTGTGGTATTGTTCTGATTGAAAGTAGTATGCTGTTACTTGGGATGGCAGATCTGAGAGAAGACGAGCAATTCCTTTTGGATTATCCTGGGGCATGTACAATATCA

Library


Library category	ESTs
melon 46d library	1

Homology

[Close]

BLAST of MU55803 vs. Swiss-Prot
Match: RAC2_LOTJA (Rac-like GTP-binding protein RAC2 OS=Lotus japonicus GN=RAC2 PE=2 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 6.9e-57
Identity = 104/116 (89.66%), Postives = 112/116 (96.55%), Query Frame = 3


Query: 315 KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQ 374
           +FIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+V+G +VNLGLWDTAGQ
Sbjct: 5   RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQ 64

Query: 375 EDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 434
           EDY+RLRPLSYRGADVFLLAFS +SRAS+ENISKKWIPELRHYAP+VPI+LVGTKL
Sbjct: 65  EDYNRLRPLSYRGADVFLLAFSLLSRASYENISKKWIPELRHYAPTVPIVLVGTKL 120

Query: 435  494
           
Sbjct: 125  120

Query: 495  554
           
Sbjct: 185  120

Query: 555  614
           
Sbjct: 245  120

Query: 615  663
           
Sbjct: 305  120

HSP 2 Score: 30.8 bits (68), Expect = 2.9e+01
Identity = 12/19 (63.16%), Postives = 14/19 (73.68%), Query Frame = 2


Query: 782 DLREDEQFLLDYPGACTIS 839
           DLRED Q+L+D+PGA  I+
Sbjct: 121 DLREDRQYLIDHPGATPIT 139

[Close]

BLAST of MU55803 vs. Swiss-Prot
Match: RHO1_PEA (Rac-like GTP-binding protein RHO1 OS=Pisum sativum GN=RHO1 PE=2 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 6.9e-57
Identity = 104/116 (89.66%), Postives = 111/116 (95.69%), Query Frame = 3


Query: 315 KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQ 374
           +FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+VNG +VNLGLWDTAGQ
Sbjct: 5   RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQ 64

Query: 375 EDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 434
           EDY+RLRPLSYRGADVF+LAFS IS+AS+EN+SKKWIPEL+HYAP VPIILVGTKL
Sbjct: 65  EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120

Query: 435  494
           
Sbjct: 125  120

Query: 495  554
           
Sbjct: 185  120

Query: 555  614
           
Sbjct: 245  120

Query: 615  663
           
Sbjct: 305  120

[Close]

BLAST of MU55803 vs. Swiss-Prot
Match: RAC6_ARATH (Rac-like GTP-binding protein ARAC6 OS=Arabidopsis thaliana GN=ARAC6 PE=1 SV=2)

HSP 1 Score: 221.5 bits (563), Expect = 1.2e-56
Identity = 103/116 (88.79%), Postives = 111/116 (95.69%), Query Frame = 3


Query: 315 KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQ 374
           +FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+VNG +VNLGLWDTAGQ
Sbjct: 5   RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQ 64

Query: 375 EDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 434
           EDY+RLRPLSYRGADVF+LAFS IS+AS+EN+SKKWIPEL+HYAP VPI+LVGTKL
Sbjct: 65  EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 435  494
           
Sbjct: 125  120

Query: 495  554
           
Sbjct: 185  120

Query: 555  614
           
Sbjct: 245  120

Query: 615  663
           
Sbjct: 305  120

[Close]

BLAST of MU55803 vs. Swiss-Prot
Match: RAC1_ARATH (Rac-like GTP-binding protein ARAC1 OS=Arabidopsis thaliana GN=ARAC1 PE=1 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.2e-56
Identity = 103/116 (88.79%), Postives = 111/116 (95.69%), Query Frame = 3


Query: 315 KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQ 374
           +FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+VNG +VNLGLWDTAGQ
Sbjct: 5   RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQ 64

Query: 375 EDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 434
           EDY+RLRPLSYRGADVF+LAFS IS+AS+EN+SKKWIPEL+HYAP VPI+LVGTKL
Sbjct: 65  EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 435  494
           
Sbjct: 125  120

Query: 495  554
           
Sbjct: 185  120

Query: 555  614
           
Sbjct: 245  120

Query: 615  663
           
Sbjct: 305  120

[Close]

BLAST of MU55803 vs. Swiss-Prot
Match: RAC1_BETVU (Rac-like GTP-binding protein RHO1 OS=Beta vulgaris GN=RHO1 PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 1.2e-56
Identity = 103/116 (88.79%), Postives = 111/116 (95.69%), Query Frame = 3


Query: 315 KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQ 374
           +FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+VNG +VNLGLWDTAGQ
Sbjct: 5   RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQ 64

Query: 375 EDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 434
           EDY+RLRPLSYRGADVF+LAFS IS+AS+EN+SKKWIPEL+HYAP VPI+LVGTKL
Sbjct: 65  EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 435  494
           
Sbjct: 125  120

Query: 495  554
           
Sbjct: 185  120

Query: 555  614
           
Sbjct: 245  120

Query: 615  663
           
Sbjct: 305  120

[Close]

BLAST of MU55803 vs. TrEMBL
Match: A0A0A0L9A9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129580 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.1e-58
Identity = 115/116 (99.14%), Postives = 115/116 (99.14%), Query Frame = 3


Query: 315 KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQ 374
           KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQ
Sbjct: 11  KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQ 70

Query: 375 EDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 434
           EDYSRLRPLSYRGADVFLLAFS ISRASFENISKKWIPELRHYAPSVPIILVGTKL
Sbjct: 71  EDYSRLRPLSYRGADVFLLAFSIISRASFENISKKWIPELRHYAPSVPIILVGTKL 126

Query: 435  494
           
Sbjct: 131  126

Query: 495  554
           
Sbjct: 191  126

Query: 555  614
           
Sbjct: 251  126

Query: 615  663
           
Sbjct: 311  126

[Close]

BLAST of MU55803 vs. TrEMBL
Match: A0A0A0L9A9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129580 PE=4 SV=1)

HSP 1 Score: 43.9 bits (102), Expect = 3.7e-01
Identity = 19/19 (100.00%), Postives = 19/19 (100.00%), Query Frame = 2


Query: 782 DLREDEQFLLDYPGACTIS 839
           DLREDEQFLLDYPGACTIS
Sbjct: 127 DLREDEQFLLDYPGACTIS 145

HSP 2 Score: 226.1 bits (575), Expect = 5.3e-56
Identity = 106/116 (91.38%), Postives = 114/116 (98.28%), Query Frame = 3


Query: 315 KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQ 374
           KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+V+GQ++NLGLWDTAGQ
Sbjct: 20  KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGQTINLGLWDTAGQ 79

Query: 375 EDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 434
           EDY+RLRPLSYRGADVF+LAFS ISR SFENISKKW+PELRHYAPSVPI+LVGTKL
Sbjct: 80  EDYNRLRPLSYRGADVFILAFSLISRPSFENISKKWVPELRHYAPSVPIVLVGTKL 135

Query: 435  494
           
Sbjct: 140  135

Query: 495  554
           
Sbjct: 200  135

Query: 555  614
           
Sbjct: 260  135

Query: 615  663
           
Sbjct: 320  135

[Close]

BLAST of MU55803 vs. TrEMBL
Match: A0A068UP47_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00028750001 PE=4 SV=1)

HSP 1 Score: 38.9 bits (89), Expect = 1.2e+01
Identity = 16/19 (84.21%), Postives = 18/19 (94.74%), Query Frame = 2


Query: 782 DLREDEQFLLDYPGACTIS 839
           DLR+D+QF LDYPGACTIS
Sbjct: 136 DLRDDKQFKLDYPGACTIS 154

HSP 2 Score: 225.7 bits (574), Expect = 6.9e-56
Identity = 107/116 (92.24%), Postives = 114/116 (98.28%), Query Frame = 3


Query: 315 KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQ 374
           KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+V+GQ+VNLGLWDTAGQ
Sbjct: 5   KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGQTVNLGLWDTAGQ 64

Query: 375 EDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 434
           EDY+RLRPLSYRGADVFLLAFS ISR SFENI+KKW+PELRHYAPSVPI+LVGTKL
Sbjct: 65  EDYNRLRPLSYRGADVFLLAFSLISRPSFENIAKKWVPELRHYAPSVPIVLVGTKL 120

Query: 435  494
           
Sbjct: 125  120

Query: 495  554
           
Sbjct: 185  120

Query: 555  614
           
Sbjct: 245  120

Query: 615  663
           
Sbjct: 305  120

[Close]

BLAST of MU55803 vs. TrEMBL
Match: W1NZF2_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00002p00158490 PE=4 SV=1)

HSP 1 Score: 33.9 bits (76), Expect = 3.9e+02
Identity = 14/19 (73.68%), Postives = 17/19 (89.47%), Query Frame = 2


Query: 782 DLREDEQFLLDYPGACTIS 839
           DLR+D+QFL D+PGA TIS
Sbjct: 121 DLRDDKQFLFDHPGATTIS 139

HSP 2 Score: 225.7 bits (574), Expect = 6.9e-56
Identity = 105/120 (87.50%), Postives = 116/120 (96.67%), Query Frame = 3


Query: 315 KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQ 374
           +FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+VNG +VNLGLWDTAGQ
Sbjct: 5   RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQ 64

Query: 375 EDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKLGEDN 434
           EDY+RLRPLSYRGADVF+LAFS IS+AS+EN+SKKWIPEL HYAP VPI+LVGTKLG+D+
Sbjct: 65  EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELTHYAPGVPIVLVGTKLGKDD 124

Query: 435  494
           
Sbjct: 125  124

Query: 495  554
           
Sbjct: 185  124

Query: 555  614
           
Sbjct: 245  124

Query: 615  674
           
Sbjct: 305  124

[Close]

BLAST of MU55803 vs. TrEMBL
Match: U5FSN4_POPTR (RAC-like GTP binding protein ARAC9 OS=Populus trichocarpa GN=POPTR_0014s05070g PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 6.9e-56
Identity = 106/116 (91.38%), Postives = 114/116 (98.28%), Query Frame = 3


Query: 315 KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQ 374
           KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLV+GQ+VNLGLWDTAGQ
Sbjct: 13  KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVDGQTVNLGLWDTAGQ 72

Query: 375 EDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 434
           EDY+RLRPLSYRGADVF+LAFS ISR S+EN+SKKW+PELRHYAPSVPI+LVGTKL
Sbjct: 73  EDYNRLRPLSYRGADVFILAFSLISRPSYENVSKKWVPELRHYAPSVPIVLVGTKL 128

Query: 435  494
           
Sbjct: 133  128

Query: 495  554
           
Sbjct: 193  128

Query: 555  614
           
Sbjct: 253  128

Query: 615  663
           
Sbjct: 313  128

[Close]

BLAST of MU55803 vs. TAIR10
Match: AT2G17800.1 (AT2G17800.1 Arabidopsis RAC-like 1)

HSP 1 Score: 221.5 bits (563), Expect = 6.6e-58
Identity = 103/116 (88.79%), Postives = 111/116 (95.69%), Query Frame = 3


Query: 315 KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQ 374
           +FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+VNG +VNLGLWDTAGQ
Sbjct: 5   RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQ 64

Query: 375 EDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 434
           EDY+RLRPLSYRGADVF+LAFS IS+AS+EN+SKKWIPEL+HYAP VPI+LVGTKL
Sbjct: 65  EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 435  494
           
Sbjct: 125  120

Query: 495  554
           
Sbjct: 185  120

Query: 555  614
           
Sbjct: 245  120

Query: 615  663
           
Sbjct: 305  120

[Close]

BLAST of MU55803 vs. TAIR10
Match: AT3G51300.1 (AT3G51300.1 RHO-related protein from plants 1)

HSP 1 Score: 221.5 bits (563), Expect = 6.6e-58
Identity = 102/116 (87.93%), Postives = 111/116 (95.69%), Query Frame = 3


Query: 315 KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQ 374
           +F+KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+VNG +VNLGLWDTAGQ
Sbjct: 5   RFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDTAGQ 64

Query: 375 EDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 434
           EDY+RLRPLSYRGADVF+LAFS IS+AS+EN+SKKWIPEL+HYAP VPI+LVGTKL
Sbjct: 65  EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 435  494
           
Sbjct: 125  120

Query: 495  554
           
Sbjct: 185  120

Query: 555  614
           
Sbjct: 245  120

Query: 615  663
           
Sbjct: 305  120

[Close]

BLAST of MU55803 vs. TAIR10
Match: AT4G35950.1 (AT4G35950.1 RAC-like 6)

HSP 1 Score: 221.5 bits (563), Expect = 6.6e-58
Identity = 103/116 (88.79%), Postives = 111/116 (95.69%), Query Frame = 3


Query: 315 KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQ 374
           +FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+VNG +VNLGLWDTAGQ
Sbjct: 5   RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQ 64

Query: 375 EDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 434
           EDY+RLRPLSYRGADVF+LAFS IS+AS+EN+SKKWIPEL+HYAP VPI+LVGTKL
Sbjct: 65  EDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 435  494
           
Sbjct: 125  120

Query: 495  554
           
Sbjct: 185  120

Query: 555  614
           
Sbjct: 245  120

Query: 615  663
           
Sbjct: 305  120

[Close]

BLAST of MU55803 vs. TAIR10
Match: AT4G35020.1 (AT4G35020.1 RAC-like 3)

HSP 1 Score: 221.5 bits (563), Expect = 6.6e-58
Identity = 102/116 (87.93%), Postives = 111/116 (95.69%), Query Frame = 3


Query: 315 KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQ 374
           +FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+V+G ++NLGLWDTAGQ
Sbjct: 5   RFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWDTAGQ 64

Query: 375 EDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 434
           EDY+RLRPLSYRGADVFLLAFS +S+AS+EN+SKKW+PELRHYAP VPIILVGTKL
Sbjct: 65  EDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120

Query: 435  494
           
Sbjct: 125  120

Query: 495  554
           
Sbjct: 185  120

Query: 555  614
           
Sbjct: 245  120

Query: 615  663
           
Sbjct: 305  120

[Close]

BLAST of MU55803 vs. TAIR10
Match: AT1G20090.1 (AT1G20090.1 RHO-related protein from plants 2)

HSP 1 Score: 219.9 bits (559), Expect = 1.9e-57
Identity = 103/116 (88.79%), Postives = 111/116 (95.69%), Query Frame = 3


Query: 315 KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQ 374
           +FIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+V+G +VNLGLWDTAGQ
Sbjct: 4   RFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQ 63

Query: 375 EDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 434
           EDY+RLRPLSYRGADVF+LAFS IS+AS+ENI+KKWIPELRHYAP VPIILVGTKL
Sbjct: 64  EDYNRLRPLSYRGADVFILAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKL 119

Query: 435  494
           
Sbjct: 124  119

Query: 495  554
           
Sbjct: 184  119

Query: 555  614
           
Sbjct: 244  119

Query: 615  663
           
Sbjct: 304  119

[Close]

BLAST of MU55803 vs. NCBI nr
Match: gi|659075746|ref|XP_008438307.1| (PREDICTED: rac-like GTP-binding protein RAC2 [Cucumis melo])

HSP 1 Score: 239.6 bits (610), Expect = 6.6e-60
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 3


Query: 315 KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQ 374
           KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQ
Sbjct: 11  KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQ 70

Query: 375 EDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 434
           EDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL
Sbjct: 71  EDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 126

Query: 435  494
           
Sbjct: 131  126

Query: 495  554
           
Sbjct: 191  126

Query: 555  614
           
Sbjct: 251  126

Query: 615  663
           
Sbjct: 311  126

[Close]

BLAST of MU55803 vs. NCBI nr
Match: gi|449432376|ref|XP_004133975.1| (PREDICTED: rac-like GTP-binding protein RAC2 [Cucumis sativus])

HSP 1 Score: 237.3 bits (604), Expect = 3.3e-59
Identity = 115/116 (99.14%), Postives = 115/116 (99.14%), Query Frame = 3


Query: 315 KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQ 374
           KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQ
Sbjct: 11  KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQ 70

Query: 375 EDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 434
           EDYSRLRPLSYRGADVFLLAFS ISRASFENISKKWIPELRHYAPSVPIILVGTKL
Sbjct: 71  EDYSRLRPLSYRGADVFLLAFSIISRASFENISKKWIPELRHYAPSVPIILVGTKL 126

Query: 435  494
           
Sbjct: 131  126

Query: 495  554
           
Sbjct: 191  126

Query: 555  614
           
Sbjct: 251  126

Query: 615  663
           
Sbjct: 311  126

[Close]

BLAST of MU55803 vs. NCBI nr
Match: gi|743788089|ref|XP_011032609.1| (PREDICTED: rac-like GTP-binding protein RAC2 [Populus euphratica])

HSP 1 Score: 229.9 bits (585), Expect = 5.3e-57
Identity = 107/116 (92.24%), Postives = 114/116 (98.28%), Query Frame = 3


Query: 315 KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQ 374
           KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQ+VNLGLWDTAGQ
Sbjct: 15  KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQTVNLGLWDTAGQ 74

Query: 375 EDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 434
           EDY+RLRPLSYRGADVF+LAFS ISR S+EN+SKKW+PELRHYAPSVPI+LVGTKL
Sbjct: 75  EDYNRLRPLSYRGADVFILAFSLISRPSYENVSKKWVPELRHYAPSVPIVLVGTKL 130

Query: 435  494
           
Sbjct: 135  130

Query: 495  554
           
Sbjct: 195  130

Query: 555  614
           
Sbjct: 255  130

Query: 615  663
           
Sbjct: 315  130

[Close]

BLAST of MU55803 vs. NCBI nr
Match: gi|1009170375|ref|XP_015866166.1| (PREDICTED: rac-like GTP-binding protein RAC2 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 229.2 bits (583), Expect = 9.0e-57
Identity = 110/116 (94.83%), Postives = 113/116 (97.41%), Query Frame = 3


Query: 315 KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQ 374
           KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLV+GQSVNLGLWDTAGQ
Sbjct: 18  KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVDGQSVNLGLWDTAGQ 77

Query: 375 EDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 434
           EDY+RLRPLSYRGADVFLLAFS ISR S+ENI KKWIPELRHYAPSVPIILVGTKL
Sbjct: 78  EDYNRLRPLSYRGADVFLLAFSLISRPSYENIPKKWIPELRHYAPSVPIILVGTKL 133

Query: 435  494
           
Sbjct: 138  133

Query: 495  554
           
Sbjct: 198  133

Query: 555  614
           
Sbjct: 258  133

Query: 615  663
           
Sbjct: 318  133

[Close]

BLAST of MU55803 vs. NCBI nr
Match: gi|1009170377|ref|XP_015866167.1| (PREDICTED: rac-like GTP-binding protein RAC2 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 229.2 bits (583), Expect = 9.0e-57
Identity = 110/116 (94.83%), Postives = 113/116 (97.41%), Query Frame = 3


Query: 315 KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQ 374
           KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLV+GQSVNLGLWDTAGQ
Sbjct: 18  KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVDGQSVNLGLWDTAGQ 77

Query: 375 EDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 434
           EDY+RLRPLSYRGADVFLLAFS ISR S+ENI KKWIPELRHYAPSVPIILVGTKL
Sbjct: 78  EDYNRLRPLSYRGADVFLLAFSLISRPSYENIPKKWIPELRHYAPSVPIILVGTKL 133

Query: 435  494
           
Sbjct: 138  133

Query: 495  554
           
Sbjct: 198  133

Query: 555  614
           
Sbjct: 258  133

Query: 615  663
           
Sbjct: 318  133

The following BLAST results are available for this feature:

BLAST of MU55803 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RAC2_LOTJA	6.9e-57	89.66	Rac-like GTP-binding protein RAC2 OS=Lotus japonicus GN=RAC2 PE=2 SV=1	[more]
RHO1_PEA	6.9e-57	89.66	Rac-like GTP-binding protein RHO1 OS=Pisum sativum GN=RHO1 PE=2 SV=1	[more]
RAC6_ARATH	1.2e-56	88.79	Rac-like GTP-binding protein ARAC6 OS=Arabidopsis thaliana GN=ARAC6 PE=1 SV=2	[more]
RAC1_ARATH	1.2e-56	88.79	Rac-like GTP-binding protein ARAC1 OS=Arabidopsis thaliana GN=ARAC1 PE=1 SV=1	[more]
RAC1_BETVU	1.2e-56	88.79	Rac-like GTP-binding protein RHO1 OS=Beta vulgaris GN=RHO1 PE=2 SV=1	[more]

BLAST of MU55803 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9A9_CUCSA	1.1e-58	99.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129580 PE=4 SV=1	[more]
A0A0A0L9A9_CUCSA	3.7e-01	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129580 PE=4 SV=1	[more]
A0A068UP47_COFCA	1.2e+01	84.21	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00028750001 PE=4 SV=1	[more]
W1NZF2_AMBTC	3.9e+02	73.68	Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00002p00158490 PE=4 SV=...	[more]
U5FSN4_POPTR	6.9e-56	91.38	RAC-like GTP binding protein ARAC9 OS=Populus trichocarpa GN=POPTR_0014s05070g P...	[more]

BLAST of MU55803 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G17800.1	6.6e-58	88.79	Arabidopsis RAC-like 1	[more]
AT3G51300.1	6.6e-58	87.93	RHO-related protein from plants 1	[more]
AT4G35950.1	6.6e-58	88.79	RAC-like 6	[more]
AT4G35020.1	6.6e-58	87.93	RAC-like 3	[more]
AT1G20090.1	1.9e-57	88.79	RHO-related protein from plants 2	[more]

BLAST of MU55803 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659075746\|ref\|XP_008438307.1\|	6.6e-60	100.00	PREDICTED: rac-like GTP-binding protein RAC2 [Cucumis melo]	[more]
gi\|449432376\|ref\|XP_004133975.1\|	3.3e-59	99.14	PREDICTED: rac-like GTP-binding protein RAC2 [Cucumis sativus]	[more]
gi\|743788089\|ref\|XP_011032609.1\|	5.3e-57	92.24	PREDICTED: rac-like GTP-binding protein RAC2 [Populus euphratica]	[more]
gi\|1009170375\|ref\|XP_015866166.1\|	9.0e-57	94.83	PREDICTED: rac-like GTP-binding protein RAC2 isoform X1 [Ziziphus jujuba]	[more]
gi\|1009170377\|ref\|XP_015866167.1\|	9.0e-57	94.83	PREDICTED: rac-like GTP-binding protein RAC2 isoform X2 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR001806	Small_GTPase
IPR005225	Small_GTP-bd_dom
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007264	small GTPase mediated signal transduction
molecular_function	GO:0005525	GTP binding

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C006283	MELO3C006283	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
46D18B09	46D18B09	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 14..126 score: 5.4
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 11..130 score: 9.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 10..126 score: 3.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 11..130 score: 3.28
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 13..34 score: 7.2E-26coord: 53..75 score: 7.2E-26coord: 115..128 score: 7.2E-26coord: 36..52 score: 7.2
None	No IPR available	PANTHER	PTHR24072	RHO FAMILY GTPASE	coord: 11..129 score: 3.0E-101coord: 170..185 score: 3.0E
None	No IPR available	PANTHER	PTHR24072:SF160	RAC-LIKE GTP-BINDING PROTEIN ARAC9	coord: 170..185 score: 3.0E-101coord: 11..129 score: 3.0E
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 10..174 score: 8.9
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 15..165 score: 6.2
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 13..169 score: 2.7
None	No IPR available	PROFILE	PS51420	RHO	coord: 6..185 score: 19