MELO3C006283 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C006283
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRas-like GTP-binding protein RHO
Locationchr6 : 2239947 .. 2242048 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTCGATTTCCTCAACAATTCATCCTCTCTTTGATTCATCTTTCTCTCTGTGGGGTTGCCTTCTGTTTCCCTTTTTCCCTTCTCTCACACCTCAATTTCAACCCCATTTTCACCAATCAATGCTTCTTTTTCTTTCTCATACCCTTTTTCAACCCTTCTTCCCACTTTTTTGTCCATCTTTTCCTCTCAATTCTCTCTATTTCCTCTTCCAAACATGCCATTCTAGGGTTTTAATCCACATTACCTGTTCTTTCTTCAAATTCCGTTCAAAAAACAATCGTTTATGGCCGCCGCTGCTCCTACGGCGGCTACAAAGTTCATCAAGTGCGTCACGGTTGGAGATGGCGCTGTTGGGAAGACTTGTCTTCTCATTTCTTACACTAGCAACACTTTTCCGACTGTATGAAATGAACTCTTCTTGTTTTGATTGTTTTCTTGGAATTTATAGTTTATGTGTTTAGCTTAAGTTATTGGGTCGATGGGCATTGTGTTGATGTTTTGCTTTGGCAGGATTATGTTCCTACCGTCTTTGACAATTTCAGCGCCAATGTTTTGGTTAATGGACAGTCTGTGAATTTGGGTCTCTGGGACACTGCTGGTGATTTCATTTTCCTCTGTTTCTAATAAGCCTGCTTCATTTATCCAGTTTTGTTCTTAAATTGTTGGATTTTCTTTTCTGGATTTCTATATTTTCGTATGTGTAAGCTTAAAGCTGATTGCCTCTACTTGCCACTTCCTGATAAGTGATAACGTATGAAAACCTTAACACCGTGGAAATGGAGTGACGTTTTTTGAGATTGAACCAAATTACAAGACAAAGGAAGCCTCAAATTGAAGCTAAACGCAAACTATAATCACTATCGGAATATAACAGTAGTTCAACCAATGTATTATAATCTATTATCTGACTATCATCGTAGAAAGGAATTTTATGTGTCATCAGGAGCCGCAGGATAGGAATATGTGAATAAGTTTTGTCAAGTATTTAGAGGAAATTTAGATGAACTTTAAAATGGAACCATATTACAAAGTTGTTCTTCTCAAAATTTGTTTTCCAAGACCGTCCAGTTCATAAGCTACTTCGCAAATTGTGTCGTATTCTTTTTCAACTACAACTCTAGTTTAGTTTTTCTTTTTCCTCCTTATATTATTGGTATGATTGGAATTCTAGTGGAAAAATTAAGAACAAGAGTCCTTGTTTCAAAGGCACTTAATCATATAGTATCTTCCAGAAACGTCATTATGAATGTTCCCTCTAATTTCCATTTTAAAGTGTTATATGAATGTTAAAAGGATACCTTTACAGGTCAAGAAGATTATAGCAGGCTAAGACCTTTGAGTTACAGAGGTGCTGATGTTTTCCTTCTTGCCTTTTCGACTATAAGTCGGGCCAGCTTTGAAAATATATCAAAGAAAGTAAGTTCAATTCCTGCACGATATTTGGGATTGTTTAGTATTTTGATTCAGTATTTAGATTCTTCTTGATGTCACTTTCTTTTGGAGCAGTGGATCCCAGAGTTAAGGCATTATGCCCCATCAGTGCCCATTATTCTTGTAGGGACCAAACTAGGTGCCTTTCTTCTTTAACTTTAATTTCATTGCCTGAATTATCAATTCCTTCACTCTCAAGTAAAATTCTCATATTCTTTCTTGATGGTTGTTTTTGTGGGCTAGTCTAAGAACGCACATCCACATATCGAACCATCTTTTTTAACTTTTAAGGGACACCAACAGATAAAAAATGTGTGTTTCAATGTCATGTAATCAGAGATAAACATCTTGATTATTGATCTTCTACATACAAGTACACACATCAAACTAGTATCTCCACATAATATAGATATATTTGAACTATGTAAAATGATCCCTGCTCGTGTCTCTAAATTGTATATTTCTCATTGTTCTGTAATTTATAGGGGAAGATAATTCTTGCAGCTCCTATTCACCCCCCACCCGCCCCTACCCCACAAATCTGTTCTTTGCATTTGTGGTATTGTTCTGATTGAAAGTAGTATGCTGTTACTTGGGATGGCAGATCTGAGAGAAGACGAGCAATTCCTTTTGGATTATCCTGGGGCATGTACAATATCAACAAAACAGG

mRNA sequence

AATTCGATTTCCTCAACAATTCATCCTCTCTTTGATTCATCTTTCTCTCTGTGGGGTTGCCTTCTGTTTCCCTTTTTCCCTTCTCTCACACCTCAATTTCAACCCCATTTTCACCAATCAATGCTTCTTTTTCTTTCTCATACCCTTTTTCAACCCTTCTTCCCACTTTTTTGTCCATCTTTTCCTCTCAATTCTCTCTATTTCCTCTTCCAAACATGCCATTCTAGGGTTTTAATCCACATTACCTGTTCTTTCTTCAAATTCCGTTCAAAAAACAATCGTTTATGGCCGCCGCTGCTCCTACGGCGGCTACAAAGTTCATCAAGTGCGTCACGGTTGGAGATGGCGCTGTTGGGAAGACTTGTCTTCTCATTTCTTACACTAGCAACACTTTTCCGACTGATTATGTTCCTACCGTCTTTGACAATTTCAGCGCCAATGTTTTGGTTAATGGACAGTCTGTGAATTTGGGTCTCTGGGACACTGCTGGTCAAGAAGATTATAGCAGGCTAAGACCTTTGAGTTACAGAGGTGCTGATGTTTTCCTTCTTGCCTTTTCGACTATAAGTCGGGCCAGCTTTGAAAATATATCAAAGAAATGGATCCCAGAGTTAAGGCATTATGCCCCATCAGTGCCCATTATTCTTGTAGGGACCAAACTAGGGGAAGATAATTCTTGCAGCTCCTATTCACCCCCCACCCGCCCCTACCCCACAAATCTGTTCTTTGCATTTGTGGTATTGTTCTGATTGAAAGTAGTATGCTGTTACTTGGGATGGCAGATCTGAGAGAAGACGAGCAATTCCTTTTGGATTATCCTGGGGCATGTACAATATCAACAAAACAGG

Coding sequence (CDS)

ATGGCCGCCGCTGCTCCTACGGCGGCTACAAAGTTCATCAAGTGCGTCACGGTTGGAGATGGCGCTGTTGGGAAGACTTGTCTTCTCATTTCTTACACTAGCAACACTTTTCCGACTGATTATGTTCCTACCGTCTTTGACAATTTCAGCGCCAATGTTTTGGTTAATGGACAGTCTGTGAATTTGGGTCTCTGGGACACTGCTGGTCAAGAAGATTATAGCAGGCTAAGACCTTTGAGTTACAGAGGTGCTGATGTTTTCCTTCTTGCCTTTTCGACTATAAGTCGGGCCAGCTTTGAAAATATATCAAAGAAATGGATCCCAGAGTTAAGGCATTATGCCCCATCAGTGCCCATTATTCTTGTAGGGACCAAACTAGGGGAAGATAATTCTTGCAGCTCCTATTCACCCCCCACCCGCCCCTACCCCACAAATCTGTTCTTTGCATTTGTGGTATTGTTCTGA

Protein sequence

MAAAAPTAATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDTAGQEDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKLGEDNSCSSYSPPTRPYPTNLFFAFVVLF*
Homology
[Close]
BLAST of MELO3C006283 vs. Swiss-Prot
Match: RHO1_PEA (Rac-like GTP-binding protein RHO1 OS=Pisum sativum GN=RHO1 PE=2 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 7.7e-58
Identity = 105/119 (88.24%), Postives = 114/119 (95.80%), Query Frame = 1 

Query: 8   AATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDT 67
           +A++FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+VNG +VNLGLWDT
Sbjct: 2   SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDT 61

Query: 68  AGQEDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 127
           AGQEDY+RLRPLSYRGADVF+LAFS IS+AS+EN+SKKWIPEL+HYAP VPIILVGTKL
Sbjct: 62  AGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120

[Close]
BLAST of MELO3C006283 vs. Swiss-Prot
Match: RAC1_BETVU (Rac-like GTP-binding protein RHO1 OS=Beta vulgaris GN=RHO1 PE=2 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.3e-57
Identity = 104/119 (87.39%), Postives = 114/119 (95.80%), Query Frame = 1 

Query: 8   AATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDT 67
           +A++FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+VNG +VNLGLWDT
Sbjct: 2   SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDT 61

Query: 68  AGQEDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 127
           AGQEDY+RLRPLSYRGADVF+LAFS IS+AS+EN+SKKWIPEL+HYAP VPI+LVGTKL
Sbjct: 62  AGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

[Close]
BLAST of MELO3C006283 vs. Swiss-Prot
Match: RAC11_ARATH (Rac-like GTP-binding protein ARAC11 OS=Arabidopsis thaliana GN=ARAC11 PE=1 SV=2)

HSP 1 Score: 223.8 bits (569), Expect = 1.3e-57
Identity = 103/119 (86.55%), Postives = 114/119 (95.80%), Query Frame = 1 

Query: 8   AATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDT 67
           +A++F+KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+VNG +VNLGLWDT
Sbjct: 2   SASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDT 61

Query: 68  AGQEDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 127
           AGQEDY+RLRPLSYRGADVF+LAFS IS+AS+EN+SKKWIPEL+HYAP VPI+LVGTKL
Sbjct: 62  AGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

[Close]
BLAST of MELO3C006283 vs. Swiss-Prot
Match: RAC3_ARATH (Rac-like GTP-binding protein ARAC3 OS=Arabidopsis thaliana GN=ARAC3 PE=1 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.3e-57
Identity = 103/119 (86.55%), Postives = 114/119 (95.80%), Query Frame = 1 

Query: 8   AATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDT 67
           +A++FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+V+G ++NLGLWDT
Sbjct: 2   SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWDT 61

Query: 68  AGQEDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 127
           AGQEDY+RLRPLSYRGADVFLLAFS +S+AS+EN+SKKW+PELRHYAP VPIILVGTKL
Sbjct: 62  AGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120

[Close]
BLAST of MELO3C006283 vs. Swiss-Prot
Match: RAC5_ORYSJ (Rac-like GTP-binding protein 5 OS=Oryza sativa subsp. japonica GN=RAC5 PE=2 SV=2)

HSP 1 Score: 223.8 bits (569), Expect = 1.3e-57
Identity = 105/119 (88.24%), Postives = 114/119 (95.80%), Query Frame = 1 

Query: 8   AATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDT 67
           +A++FIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+V+G +VNLGLWDT
Sbjct: 2   SASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDT 61

Query: 68  AGQEDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 127
           AGQEDY+RLRPLSYRGADVFLLAFS IS+AS+EN+SKKWIPELRHYAP VPIILVGTKL
Sbjct: 62  AGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELRHYAPGVPIILVGTKL 120

[Close]
BLAST of MELO3C006283 vs. TrEMBL
Match: A0A0A0L9A9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129580 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 8.6e-64
Identity = 124/126 (98.41%), Postives = 124/126 (98.41%), Query Frame = 1 

Query: 1   MAAAAPTAATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSV 60
           MAAA PTAATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSV
Sbjct: 1   MAAATPTAATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSV 60

Query: 61  NLGLWDTAGQEDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPII 120
           NLGLWDTAGQEDYSRLRPLSYRGADVFLLAFS ISRASFENISKKWIPELRHYAPSVPII
Sbjct: 61  NLGLWDTAGQEDYSRLRPLSYRGADVFLLAFSIISRASFENISKKWIPELRHYAPSVPII 120

Query: 121 LVGTKL 127
           LVGTKL
Sbjct: 121 LVGTKL 126

[Close]
BLAST of MELO3C006283 vs. TrEMBL
Match: U5FSN4_POPTR (RAC-like GTP binding protein ARAC9 OS=Populus trichocarpa GN=POPTR_0014s05070g PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.4e-58
Identity = 111/124 (89.52%), Postives = 119/124 (95.97%), Query Frame = 1 

Query: 3   AAAPTAATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNL 62
           AAA T  TKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLV+GQ+VNL
Sbjct: 5   AAASTTTTKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVDGQTVNL 64

Query: 63  GLWDTAGQEDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILV 122
           GLWDTAGQEDY+RLRPLSYRGADVF+LAFS ISR S+EN+SKKW+PELRHYAPSVPI+LV
Sbjct: 65  GLWDTAGQEDYNRLRPLSYRGADVFILAFSLISRPSYENVSKKWVPELRHYAPSVPIVLV 124

Query: 123 GTKL 127
           GTKL
Sbjct: 125 GTKL 128

[Close]
BLAST of MELO3C006283 vs. TrEMBL
Match: M5XDJ3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011353mg PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 5.4e-58
Identity = 112/125 (89.60%), Postives = 119/125 (95.20%), Query Frame = 1 

Query: 2   AAAAPTAATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVN 61
           AAAA  + +KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLV+GQ+VN
Sbjct: 14  AAAAAASTSKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVDGQTVN 73

Query: 62  LGLWDTAGQEDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIIL 121
           LGLWDTAGQEDY+RLRPLSYRGADVFLLAFS ISR S+ENI KKW+PELRHYAPSVPIIL
Sbjct: 74  LGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRPSYENIPKKWVPELRHYAPSVPIIL 133

Query: 122 VGTKL 127
           VGTKL
Sbjct: 134 VGTKL 138

[Close]
BLAST of MELO3C006283 vs. TrEMBL
Match: A0A068UP47_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00028750001 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 7.0e-58
Identity = 109/120 (90.83%), Postives = 118/120 (98.33%), Query Frame = 1 

Query: 7   TAATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWD 66
           TAA+KFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+V+GQ++NLGLWD
Sbjct: 16  TAASKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGQTINLGLWD 75

Query: 67  TAGQEDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 126
           TAGQEDY+RLRPLSYRGADVF+LAFS ISR SFENISKKW+PELRHYAPSVPI+LVGTKL
Sbjct: 76  TAGQEDYNRLRPLSYRGADVFILAFSLISRPSFENISKKWVPELRHYAPSVPIVLVGTKL 135

[Close]
BLAST of MELO3C006283 vs. TrEMBL
Match: A0A0B0PYS5_GOSAR (Rac-like GTP-binding protein ARAC9 OS=Gossypium arboreum GN=F383_14846 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.0e-57
Identity = 109/125 (87.20%), Postives = 117/125 (93.60%), Query Frame = 1 

Query: 2   AAAAPTAATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVN 61
           AAA  T  TKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+V+GQ+VN
Sbjct: 8   AAATATTQTKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVMVDGQTVN 67

Query: 62  LGLWDTAGQEDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIIL 121
           LGLWDTAGQEDY+RLRPLSYRGADVFLLAFS ISR S+EN+SKKW+PELRHYAP  PI+L
Sbjct: 68  LGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRPSYENVSKKWVPELRHYAPRAPIVL 127

Query: 122 VGTKL 127
           VGTKL
Sbjct: 128 VGTKL 132

[Close]
BLAST of MELO3C006283 vs. TAIR10
Match: AT4G35950.1 (AT4G35950.1 RAC-like 6)

HSP 1 Score: 223.8 bits (569), Expect = 7.4e-59
Identity = 104/119 (87.39%), Postives = 114/119 (95.80%), Query Frame = 1 

Query: 8   AATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDT 67
           +A++FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+VNG +VNLGLWDT
Sbjct: 2   SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDT 61

Query: 68  AGQEDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 127
           AGQEDY+RLRPLSYRGADVF+LAFS IS+AS+EN+SKKWIPEL+HYAP VPI+LVGTKL
Sbjct: 62  AGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

[Close]
BLAST of MELO3C006283 vs. TAIR10
Match: AT3G51300.1 (AT3G51300.1 RHO-related protein from plants 1)

HSP 1 Score: 223.8 bits (569), Expect = 7.4e-59
Identity = 103/119 (86.55%), Postives = 114/119 (95.80%), Query Frame = 1 

Query: 8   AATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDT 67
           +A++F+KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+VNG +VNLGLWDT
Sbjct: 2   SASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWDT 61

Query: 68  AGQEDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 127
           AGQEDY+RLRPLSYRGADVF+LAFS IS+AS+EN+SKKWIPEL+HYAP VPI+LVGTKL
Sbjct: 62  AGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

[Close]
BLAST of MELO3C006283 vs. TAIR10
Match: AT2G17800.1 (AT2G17800.1 Arabidopsis RAC-like 1)

HSP 1 Score: 223.8 bits (569), Expect = 7.4e-59
Identity = 104/119 (87.39%), Postives = 114/119 (95.80%), Query Frame = 1 

Query: 8   AATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDT 67
           +A++FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+VNG +VNLGLWDT
Sbjct: 2   SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDT 61

Query: 68  AGQEDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 127
           AGQEDY+RLRPLSYRGADVF+LAFS IS+AS+EN+SKKWIPEL+HYAP VPI+LVGTKL
Sbjct: 62  AGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

[Close]
BLAST of MELO3C006283 vs. TAIR10
Match: AT4G35020.1 (AT4G35020.1 RAC-like 3)

HSP 1 Score: 223.8 bits (569), Expect = 7.4e-59
Identity = 103/119 (86.55%), Postives = 114/119 (95.80%), Query Frame = 1 

Query: 8   AATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDT 67
           +A++FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+V+G ++NLGLWDT
Sbjct: 2   SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWDT 61

Query: 68  AGQEDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKL 127
           AGQEDY+RLRPLSYRGADVFLLAFS +S+AS+EN+SKKW+PELRHYAP VPIILVGTKL
Sbjct: 62  AGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120

[Close]
BLAST of MELO3C006283 vs. TAIR10
Match: AT1G75840.1 (AT1G75840.1 RAC-like GTP binding protein 5)

HSP 1 Score: 222.6 bits (566), Expect = 1.6e-58
Identity = 108/140 (77.14%), Postives = 120/140 (85.71%), Query Frame = 1 

Query: 8   AATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNLGLWDT 67
           +A++FIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANV+V+G +VNLGLWDT
Sbjct: 2   SASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDT 61

Query: 68  AGQEDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILVGTKLG 127
           AGQEDY+RLRPLSYRGADVF+LAFS IS+AS+EN++KKWIPELRHYAP VPIILVGTKL 
Sbjct: 62  AGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLD 121

Query: 128 --EDNSCSSYSPPTRPYPTN 146
             +D       P   P  TN
Sbjct: 122 LRDDKQFFIDHPGAVPITTN 141

[Close]
BLAST of MELO3C006283 vs. NCBI nr
Match: gi|659075746|ref|XP_008438307.1| (PREDICTED: rac-like GTP-binding protein RAC2 [Cucumis melo])

HSP 1 Score: 255.0 bits (650), Expect = 8.5e-65
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 1 

Query: 1   MAAAAPTAATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSV 60
           MAAAAPTAATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSV
Sbjct: 1   MAAAAPTAATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSV 60

Query: 61  NLGLWDTAGQEDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPII 120
           NLGLWDTAGQEDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPII
Sbjct: 61  NLGLWDTAGQEDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPII 120

Query: 121 LVGTKL 127
           LVGTKL
Sbjct: 121 LVGTKL 126

[Close]
BLAST of MELO3C006283 vs. NCBI nr
Match: gi|449432376|ref|XP_004133975.1| (PREDICTED: rac-like GTP-binding protein RAC2 [Cucumis sativus])

HSP 1 Score: 251.1 bits (640), Expect = 1.2e-63
Identity = 124/126 (98.41%), Postives = 124/126 (98.41%), Query Frame = 1 

Query: 1   MAAAAPTAATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSV 60
           MAAA PTAATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSV
Sbjct: 1   MAAATPTAATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSV 60

Query: 61  NLGLWDTAGQEDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPII 120
           NLGLWDTAGQEDYSRLRPLSYRGADVFLLAFS ISRASFENISKKWIPELRHYAPSVPII
Sbjct: 61  NLGLWDTAGQEDYSRLRPLSYRGADVFLLAFSIISRASFENISKKWIPELRHYAPSVPII 120

Query: 121 LVGTKL 127
           LVGTKL
Sbjct: 121 LVGTKL 126

[Close]
BLAST of MELO3C006283 vs. NCBI nr
Match: gi|743788089|ref|XP_011032609.1| (PREDICTED: rac-like GTP-binding protein RAC2 [Populus euphratica])

HSP 1 Score: 237.3 bits (604), Expect = 1.8e-59
Identity = 113/125 (90.40%), Postives = 120/125 (96.00%), Query Frame = 1 

Query: 2   AAAAPTAATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVN 61
           AAAA T  TKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQ+VN
Sbjct: 6   AAAASTTTTKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQTVN 65

Query: 62  LGLWDTAGQEDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIIL 121
           LGLWDTAGQEDY+RLRPLSYRGADVF+LAFS ISR S+EN+SKKW+PELRHYAPSVPI+L
Sbjct: 66  LGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISRPSYENVSKKWVPELRHYAPSVPIVL 125

Query: 122 VGTKL 127
           VGTKL
Sbjct: 126 VGTKL 130

[Close]
BLAST of MELO3C006283 vs. NCBI nr
Match: gi|566202631|ref|XP_006375184.1| (RAC-like GTP binding protein ARAC9 [Populus trichocarpa])

HSP 1 Score: 233.8 bits (595), Expect = 2.0e-58
Identity = 111/124 (89.52%), Postives = 119/124 (95.97%), Query Frame = 1 

Query: 3   AAAPTAATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVNL 62
           AAA T  TKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLV+GQ+VNL
Sbjct: 5   AAASTTTTKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVDGQTVNL 64

Query: 63  GLWDTAGQEDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIILV 122
           GLWDTAGQEDY+RLRPLSYRGADVF+LAFS ISR S+EN+SKKW+PELRHYAPSVPI+LV
Sbjct: 65  GLWDTAGQEDYNRLRPLSYRGADVFILAFSLISRPSYENVSKKWVPELRHYAPSVPIVLV 124

Query: 123 GTKL 127
           GTKL
Sbjct: 125 GTKL 128

[Close]
BLAST of MELO3C006283 vs. NCBI nr
Match: gi|729455591|ref|XP_010524447.1| (PREDICTED: rac-like GTP-binding protein ARAC9 isoform X2 [Tarenaya hassleriana])

HSP 1 Score: 232.6 bits (592), Expect = 4.5e-58
Identity = 111/125 (88.80%), Postives = 120/125 (96.00%), Query Frame = 1 

Query: 2   AAAAPTAATKFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNGQSVN 61
           A+ A TAAT+FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV V+GQ+VN
Sbjct: 7   ASVAATAATRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVSVDGQTVN 66

Query: 62  LGLWDTAGQEDYSRLRPLSYRGADVFLLAFSTISRASFENISKKWIPELRHYAPSVPIIL 121
           LGLWDTAGQEDY+RLRPLSYRGADVF+LAFS ISR SFENI+KKW+PELRHYAPSVPI+L
Sbjct: 67  LGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISRPSFENIAKKWVPELRHYAPSVPIVL 126

Query: 122 VGTKL 127
           VGTKL
Sbjct: 127 VGTKL 131

The following BLAST results are available for this feature:
BLAST of MELO3C006283 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RHO1_PEA7.7e-5888.24Rac-like GTP-binding protein RHO1 OS=Pisum sativum GN=RHO1 PE=2 SV=1[more]
RAC1_BETVU1.3e-5787.39Rac-like GTP-binding protein RHO1 OS=Beta vulgaris GN=RHO1 PE=2 SV=1[more]
RAC11_ARATH1.3e-5786.55Rac-like GTP-binding protein ARAC11 OS=Arabidopsis thaliana GN=ARAC11 PE=1 SV=2[more]
RAC3_ARATH1.3e-5786.55Rac-like GTP-binding protein ARAC3 OS=Arabidopsis thaliana GN=ARAC3 PE=1 SV=1[more]
RAC5_ORYSJ1.3e-5788.24Rac-like GTP-binding protein 5 OS=Oryza sativa subsp. japonica GN=RAC5 PE=2 SV=2[more]
BLAST of MELO3C006283 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9A9_CUCSA8.6e-6498.41Uncharacterized protein OS=Cucumis sativus GN=Csa_3G129580 PE=4 SV=1[more]
U5FSN4_POPTR1.4e-5889.52RAC-like GTP binding protein ARAC9 OS=Populus trichocarpa GN=POPTR_0014s05070g P... [more]
M5XDJ3_PRUPE5.4e-5889.60Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011353mg PE=4 SV=1[more]
A0A068UP47_COFCA7.0e-5890.83Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00028750001 PE=4 SV=1[more]
A0A0B0PYS5_GOSAR2.0e-5787.20Rac-like GTP-binding protein ARAC9 OS=Gossypium arboreum GN=F383_14846 PE=4 SV=1[more]
BLAST of MELO3C006283 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G35950.17.4e-5987.39 RAC-like 6[more]
AT3G51300.17.4e-5986.55 RHO-related protein from plants 1[more]
AT2G17800.17.4e-5987.39 Arabidopsis RAC-like 1[more]
AT4G35020.17.4e-5986.55 RAC-like 3[more]
AT1G75840.11.6e-5877.14 RAC-like GTP binding protein 5[more]
BLAST of MELO3C006283 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075746|ref|XP_008438307.1|8.5e-65100.00PREDICTED: rac-like GTP-binding protein RAC2 [Cucumis melo][more]
gi|449432376|ref|XP_004133975.1|1.2e-6398.41PREDICTED: rac-like GTP-binding protein RAC2 [Cucumis sativus][more]
gi|743788089|ref|XP_011032609.1|1.8e-5990.40PREDICTED: rac-like GTP-binding protein RAC2 [Populus euphratica][more]
gi|566202631|ref|XP_006375184.1|2.0e-5889.52RAC-like GTP binding protein ARAC9 [Populus trichocarpa][more]
gi|729455591|ref|XP_010524447.1|4.5e-5888.80PREDICTED: rac-like GTP-binding protein ARAC9 isoform X2 [Tarenaya hassleriana][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045010 actin nucleation
biological_process GO:0006687 glycosphingolipid metabolic process
biological_process GO:0015031 protein transport
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0010090 trichome morphogenesis
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0008152 metabolic process
biological_process GO:0046907 intracellular transport
cellular_component GO:0005622 intracellular
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0005525 GTP binding
molecular_function GO:0004767 sphingomyelin phosphodiesterase activity
molecular_function GO:0003924 GTPase activity
molecular_function GO:0016740 transferase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU55803melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C006283T1MELO3C006283T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU55803MU55803transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 14..126
score: 3.6
IPR005225Small GTP-binding protein domainTIGRFAMsTIGR00231TIGR00231coord: 11..126
score: 8.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 10..126
score: 2.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 11..130
score: 1.88
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 36..52
score: 4.3E-26coord: 53..75
score: 4.3E-26coord: 115..128
score: 4.3E-26coord: 13..34
score: 4.3
NoneNo IPR availablePANTHERPTHR24072RHO FAMILY GTPASEcoord: 11..126
score: 1.4
NoneNo IPR availablePANTHERPTHR24072:SF160RAC-LIKE GTP-BINDING PROTEIN ARAC9coord: 11..126
score: 1.4
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 10..154
score: 5.6
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 15..143
score: 4.0
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 13..153
score: 6.4
NoneNo IPR availablePROFILEPS51420RHOcoord: 6..154
score: 19

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C006283Cla021391Watermelon (97103) v1mewmB461
MELO3C006283ClCG05G003030Watermelon (Charleston Gray)mewcgB427
MELO3C006283Cla97C05G083660Watermelon (97103) v2mewmbB434
MELO3C006283Bhi01G000133Wax gourdmewgoB531
MELO3C006283CSPI03G10490Wild cucumber (PI 183967)cpimeB230
MELO3C006283Cucsa.256740Cucumber (Gy14) v1cgymeB439
MELO3C006283CmaCh14G019190Cucurbita maxima (Rimu)cmameB242
MELO3C006283CmoCh14G019730Cucurbita moschata (Rifu)cmomeB230
MELO3C006283Cp4.1LG03g17790Cucurbita pepo (Zucchini)cpemeB585
MELO3C006283CsGy3G010590Cucumber (Gy14) v2cgybmeB200
MELO3C006283Carg14905Silver-seed gourdcarmeB0622
MELO3C006283CsaV3_3G010650Cucumber (Chinese Long) v3cucmeB236
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C006283Cucurbita maxima (Rimu)cmameB343
MELO3C006283Cucurbita maxima (Rimu)cmameB763
MELO3C006283Cucurbita moschata (Rifu)cmomeB336
MELO3C006283Cucurbita moschata (Rifu)cmomeB755
MELO3C006283Wild cucumber (PI 183967)cpimeB145
MELO3C006283Wild cucumber (PI 183967)cpimeB238
MELO3C006283Cucumber (Chinese Long) v2cumeB236
MELO3C006283Watermelon (Charleston Gray)mewcgB441
MELO3C006283Watermelon (97103) v1mewmB456
MELO3C006283Cucurbita pepo (Zucchini)cpemeB141
MELO3C006283Cucurbita pepo (Zucchini)cpemeB316
MELO3C006283Cucurbita pepo (Zucchini)cpemeB813
MELO3C006283Bottle gourd (USVL1VR-Ls)lsimeB029
MELO3C006283Bottle gourd (USVL1VR-Ls)lsimeB378
MELO3C006283Bottle gourd (USVL1VR-Ls)lsimeB445
MELO3C006283Cucumber (Gy14) v2cgybmeB208
MELO3C006283Silver-seed gourdcarmeB0236
MELO3C006283Silver-seed gourdcarmeB0941
MELO3C006283Silver-seed gourdcarmeB1050
MELO3C006283Cucumber (Chinese Long) v3cucmeB244
MELO3C006283Watermelon (97103) v2mewmbB428
MELO3C006283Watermelon (97103) v2mewmbB448
MELO3C006283Wax gourdmewgoB513
MELO3C006283Cucumber (Gy14) v1cgymeB533