MU54433 (transcribed_cluster) Melon (DHL92) v3.5.1

Overview
NameMU54433
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Description60S ribosomal L21-1-like protein
Locationchr4 : 29690253 .. 29691549 (-)
Sequence length766
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

CATTTTGTGAGAGAGTGTGAGAGAGTGTGAGAGAAAGCTTCATCCTGCTCCAATCATGCCGGCCGGCCATGGACTTCGATCTCGTACCAGAGACCTCTTCGCCAGGCCTTTCAGGAAGAAGGGTTATATTGCTTTGACTACCTACTTGAGGACATACAAAATTGGCGATTATGTCGATATCAAGGTGAACGGCGCCGTCCACAAGGGTATGCCTCATAAATTTTACCATGGTCGCACAGGTCGCGTATGGAATGTTACAAAGCGCGCCATCGGTGTCGAGATCAACAAGCAGGTGGGGAACAGAATTATTAAGAAGAGAATTCATGTCCGAGTCGAGCACGTGCAGCCTTCTCGATGCACCGAGGAATTCCGTTTGAGGAAGGTGAAGAATGACGAGCTGAAGGCCGAAGCCAAGGCCAAAGGTGTAGTCATTTGCACCAAGAGGCAACCGGAAGGCCCCAAACCAGGGTTCATGGTTGAAGGTGCTTTAATGGAGACTGTGACTCCCATTCCATACGATGTGGTTAATGATCTCAAGGGCGGCTATTAGAATTTTCTCCTCTTTGAACTTTTGCCTTGTTTCGTCAGTCTTATTTTTGTTTGATCTTTGAACTGCTTGAATAGTACAATTTTCTCATTATGCTTCTAAATTTTGGATACCAAACTTATGGAATTGAATTGTTTCTTAGTTTCTGGTTTTGGCCATTAGCATAAAACAGTGTAGTTTTAGCTTATTCAAAGTAAATTTTGTTGCGTGATGTTCTTG
Homology
[Close]
BLAST of MU54433 vs. Swiss-Prot
Match: RL211_ARATH (60S ribosomal protein L21-1 OS=Arabidopsis thaliana GN=RPL21A PE=2 SV=2)

HSP 1 Score: 302.0 bits (772), Expect = 6.2e-81
Identity = 138/164 (84.15%), Postives = 151/164 (92.07%), Query Frame = 2 

Query: 56  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 115
           MPAGHG+R+RTRDLFARPFRKKGYI L+TYLRT+K+GDYVD+KVNGA+HKGMPHKFYHGR
Sbjct: 1   MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60

Query: 116 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVKNDELKAEAK 175
           TGR+WNVTKRA+GVE+NKQ+GNRII+KRIHVRVEHVQ SRC EEF+LRK KNDELKA AK
Sbjct: 61  TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAK 120

Query: 176 AKGVVICTKRQPEGPKPGFMVEGALMETVTPIPYDVVNDLKGGY 235
           A G  I TKRQP+GPKPGFMVEG  +ETVTPIPYDVVNDLKGGY
Sbjct: 121 ANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164

Query: 236  295
           
Sbjct: 181  164

Query: 296  355
           
Sbjct: 241  164

Query: 356  415
           
Sbjct: 301  164

Query: 416  475
           
Sbjct: 361  164

Query: 476  535
           
Sbjct: 421  164

Query: 536  548
           
Sbjct: 481  164

[Close]
BLAST of MU54433 vs. Swiss-Prot
Match: RL212_ARATH (60S ribosomal protein L21-2 OS=Arabidopsis thaliana GN=RPL21E PE=2 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 3.1e-80
Identity = 136/164 (82.93%), Postives = 152/164 (92.68%), Query Frame = 2 

Query: 56  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 115
           MPAGHG+R+RTRDLFARPFRKKGYI L+TYLRT+K+GDYVD+KVNGA+HKGMPHKFYHGR
Sbjct: 1   MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60

Query: 116 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVKNDELKAEAK 175
           TGR+WNVTKRA+GVE+NKQ+GNRII+KRIHVRVEHVQ SRC EEF+LRK +ND LKA+AK
Sbjct: 61  TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAK 120

Query: 176 AKGVVICTKRQPEGPKPGFMVEGALMETVTPIPYDVVNDLKGGY 235
           A+G  I TKRQP+GPKPGFMVEG  +ETVTPIPYDVVNDLKGGY
Sbjct: 121 ARGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164

Query: 236  295
           
Sbjct: 181  164

Query: 296  355
           
Sbjct: 241  164

Query: 356  415
           
Sbjct: 301  164

Query: 416  475
           
Sbjct: 361  164

Query: 476  535
           
Sbjct: 421  164

Query: 536  548
           
Sbjct: 481  164

[Close]
BLAST of MU54433 vs. Swiss-Prot
Match: RL21A_YEAST (60S ribosomal protein L21-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPL21A PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 8.8e-43
Identity = 84/157 (53.50%), Postives = 112/157 (71.34%), Query Frame = 2 

Query: 56  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 115
           M   HG RSRTR +F R FRK G + L+TYL+ YK+GD VDIK NG++ KGMPHKFY G+
Sbjct: 1   MGKSHGYRSRTRYMFQRDFRKHGAVHLSTYLKVYKVGDIVDIKANGSIQKGMPHKFYQGK 60

Query: 116 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVKNDELKAEAK 175
           TG V+NVTK ++GV INK VGNR ++KR+++RVEH++ S+C +EF  R   N   +AEAK
Sbjct: 61  TGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAK 120

Query: 176 AKGVVICTKRQPEGPKPGFMV--EGALMETVTPIPYD 235
           A+GV +  KRQP  P+   +V  EG + +T+ P+PY+
Sbjct: 121 AQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157

Query: 236  295
           
Sbjct: 181  157

Query: 296  355
           
Sbjct: 241  157

Query: 356  415
           
Sbjct: 301  157

Query: 416  475
           
Sbjct: 361  157

Query: 476  521
           
Sbjct: 421  157

[Close]
BLAST of MU54433 vs. Swiss-Prot
Match: RL21B_YEAST (60S ribosomal protein L21-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPL21B PE=1 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 2.0e-42
Identity = 83/157 (52.87%), Postives = 112/157 (71.34%), Query Frame = 2 

Query: 56  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 115
           M   HG RSRTR +F R FRK G + ++TYL+ YK+GD VDIK NG++ KGMPHKFY G+
Sbjct: 1   MGKSHGYRSRTRYMFQRDFRKHGAVHMSTYLKIYKVGDIVDIKANGSIQKGMPHKFYQGK 60

Query: 116 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVKNDELKAEAK 175
           TG V+NVTK ++GV INK VGNR ++KR+++RVEH++ S+C +EF  R   N   +AEAK
Sbjct: 61  TGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAK 120

Query: 176 AKGVVICTKRQPEGPKPGFMV--EGALMETVTPIPYD 235
           A+GV +  KRQP  P+   +V  EG + +T+ P+PY+
Sbjct: 121 AQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157

Query: 236  295
           
Sbjct: 181  157

Query: 296  355
           
Sbjct: 241  157

Query: 356  415
           
Sbjct: 301  157

Query: 416  475
           
Sbjct: 361  157

Query: 476  521
           
Sbjct: 421  157

[Close]
BLAST of MU54433 vs. Swiss-Prot
Match: RL21_CYAPA (60S ribosomal protein L21 OS=Cyanophora paradoxa GN=RPL21 PE=2 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 5.7e-42
Identity = 90/158 (56.96%), Postives = 112/158 (70.89%), Query Frame = 2 

Query: 56  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 115
           MP  +G R+RTR LFAR F+  G + L+TYL  +KIG+YVD+  N AVHKGMP K+YHGR
Sbjct: 1   MPHSYGYRARTRALFARAFKTNGPVHLSTYLTNFKIGEYVDVVGNAAVHKGMPFKYYHGR 60

Query: 116 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVKNDELKAEAK 175
           TG VWNVTKRAIGVEINK+V +RIIKKRIHVR++HV+ S C + F  R  +ND++K +A 
Sbjct: 61  TGIVWNVTKRAIGVEINKRVRHRIIKKRIHVRIDHVKKSSCRDSFLKRVKENDKIKHDAH 120

Query: 176 -AKGVVICTKRQPEGPKPGFMV--EGALMETVTPIPYD 235
            AK  V  TKR P  PK G ++  +G + ET   IPY+
Sbjct: 121 VAKLPVPSTKRLPVLPKAGAIIKSKGQVPETCHAIPYE 158

Query: 236  295
           
Sbjct: 181  158

Query: 296  355
           
Sbjct: 241  158

Query: 356  415
           
Sbjct: 301  158

Query: 416  475
           
Sbjct: 361  158

Query: 476  521
           
Sbjct: 421  158

[Close]
BLAST of MU54433 vs. TrEMBL
Match: A0A0A0LEZ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G797610 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 2.0e-89
Identity = 162/164 (98.78%), Postives = 163/164 (99.39%), Query Frame = 2 

Query: 56  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 115
           MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60

Query: 116 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVKNDELKAEAK 175
           TG+VWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVKNDELKAEAK
Sbjct: 61  TGQVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVKNDELKAEAK 120

Query: 176 AKGVVICTKRQPEGPKPGFMVEGALMETVTPIPYDVVNDLKGGY 235
           AKG VICTKRQPEGPKPGFMVEGALMETVTPIPYDVVNDLKGGY
Sbjct: 121 AKGTVICTKRQPEGPKPGFMVEGALMETVTPIPYDVVNDLKGGY 164

Query: 236  295
           
Sbjct: 181  164

Query: 296  355
           
Sbjct: 241  164

Query: 356  415
           
Sbjct: 301  164

Query: 416  475
           
Sbjct: 361  164

Query: 476  535
           
Sbjct: 421  164

Query: 536  548
           
Sbjct: 481  164

[Close]
BLAST of MU54433 vs. TrEMBL
Match: A0A0B0MJE8_GOSAR (60S ribosomal L21-1-like protein OS=Gossypium arboreum GN=F383_17279 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 3.8e-85
Identity = 151/164 (92.07%), Postives = 161/164 (98.17%), Query Frame = 2 

Query: 56  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 115
           MPAGHGLRSRTRDLF+RPFRKKGYI L+TYLRTYKIGDYVD+KVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFSRPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60

Query: 116 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVKNDELKAEAK 175
           TGRVWNVTKRAIGVE+NKQVGNRII+KRIHVRVEHVQPSRCTEEF+LRK+KND+LKAEAK
Sbjct: 61  TGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVQPSRCTEEFKLRKIKNDQLKAEAK 120

Query: 176 AKGVVICTKRQPEGPKPGFMVEGALMETVTPIPYDVVNDLKGGY 235
           AKG VI TKRQPEGPKPGFMVEGA++ETVTPIPYDVVNDLKGGY
Sbjct: 121 AKGEVISTKRQPEGPKPGFMVEGAMLETVTPIPYDVVNDLKGGY 164

Query: 236  295
           
Sbjct: 181  164

Query: 296  355
           
Sbjct: 241  164

Query: 356  415
           
Sbjct: 301  164

Query: 416  475
           
Sbjct: 361  164

Query: 476  535
           
Sbjct: 421  164

Query: 536  548
           
Sbjct: 481  164

[Close]
BLAST of MU54433 vs. TrEMBL
Match: A0A0U1WT33_GOSHI (60S ribosomal protein L21 OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 3.8e-85
Identity = 151/164 (92.07%), Postives = 161/164 (98.17%), Query Frame = 2 

Query: 56  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 115
           MPAGHGLRSRTRDLF+RPFRKKGYI L+TYLRTYKIGDYVD+KVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFSRPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60

Query: 116 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVKNDELKAEAK 175
           TGRVWNVTKRAIGVE+NKQVGNRII+KRIHVRVEHVQPSRCTEEF+LRK+KND+LKAEAK
Sbjct: 61  TGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVQPSRCTEEFKLRKIKNDQLKAEAK 120

Query: 176 AKGVVICTKRQPEGPKPGFMVEGALMETVTPIPYDVVNDLKGGY 235
           AKG VI TKRQPEGPKPGFMVEGA++ETVTPIPYDVVNDLKGGY
Sbjct: 121 AKGEVISTKRQPEGPKPGFMVEGAMLETVTPIPYDVVNDLKGGY 164

Query: 236  295
           
Sbjct: 181  164

Query: 296  355
           
Sbjct: 241  164

Query: 356  415
           
Sbjct: 301  164

Query: 416  475
           
Sbjct: 361  164

Query: 476  535
           
Sbjct: 421  164

Query: 536  548
           
Sbjct: 481  164

[Close]
BLAST of MU54433 vs. TrEMBL
Match: A0A0D2SXW0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G144200 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 5.0e-85
Identity = 150/164 (91.46%), Postives = 161/164 (98.17%), Query Frame = 2 

Query: 56  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 115
           MPAGHGLRSRTRDLF+RPFRKKGYI L+TYLRTYKIGDYVD+KVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFSRPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60

Query: 116 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVKNDELKAEAK 175
           TGRVWN+TKRAIGVE+NKQVGNRII+KRIHVRVEHVQPSRCTEEF+LRK+KND+LKAEAK
Sbjct: 61  TGRVWNITKRAIGVEVNKQVGNRIIRKRIHVRVEHVQPSRCTEEFKLRKIKNDQLKAEAK 120

Query: 176 AKGVVICTKRQPEGPKPGFMVEGALMETVTPIPYDVVNDLKGGY 235
           AKG VI TKRQPEGPKPGFMVEGA++ETVTPIPYDVVNDLKGGY
Sbjct: 121 AKGEVISTKRQPEGPKPGFMVEGAMLETVTPIPYDVVNDLKGGY 164

Query: 236  295
           
Sbjct: 181  164

Query: 296  355
           
Sbjct: 241  164

Query: 356  415
           
Sbjct: 301  164

Query: 416  475
           
Sbjct: 361  164

Query: 476  535
           
Sbjct: 421  164

Query: 536  548
           
Sbjct: 481  164

[Close]
BLAST of MU54433 vs. TrEMBL
Match: J3LJV3_ORYBR (Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 5.0e-85
Identity = 153/164 (93.29%), Postives = 159/164 (96.95%), Query Frame = 2 

Query: 56  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 115
           MPAGHGLRSRTRDLFARPFRKKGYI LTTYLRTYKIGDYVD+KVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60

Query: 116 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVKNDELKAEAK 175
           TGRVWNVTKRAIGVEINKQVGNRII+KRIHVRVEHVQPSRCTEE RLRK+KND+LKAEAK
Sbjct: 61  TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEELRLRKIKNDQLKAEAK 120

Query: 176 AKGVVICTKRQPEGPKPGFMVEGALMETVTPIPYDVVNDLKGGY 235
           A+G VI TKRQPEGPKPGFMVEGA +ETVTPIPYDVVNDLKGGY
Sbjct: 121 ARGEVISTKRQPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 164

Query: 236  295
           
Sbjct: 181  164

Query: 296  355
           
Sbjct: 241  164

Query: 356  415
           
Sbjct: 301  164

Query: 416  475
           
Sbjct: 361  164

Query: 476  535
           
Sbjct: 421  164

Query: 536  548
           
Sbjct: 481  164

[Close]
BLAST of MU54433 vs. TAIR10
Match: AT1G09590.1 (AT1G09590.1 Translation protein SH3-like family protein)

HSP 1 Score: 302.0 bits (772), Expect = 3.5e-82
Identity = 138/164 (84.15%), Postives = 151/164 (92.07%), Query Frame = 2 

Query: 56  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 115
           MPAGHG+R+RTRDLFARPFRKKGYI L+TYLRT+K+GDYVD+KVNGA+HKGMPHKFYHGR
Sbjct: 1   MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60

Query: 116 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVKNDELKAEAK 175
           TGR+WNVTKRA+GVE+NKQ+GNRII+KRIHVRVEHVQ SRC EEF+LRK KNDELKA AK
Sbjct: 61  TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAK 120

Query: 176 AKGVVICTKRQPEGPKPGFMVEGALMETVTPIPYDVVNDLKGGY 235
           A G  I TKRQP+GPKPGFMVEG  +ETVTPIPYDVVNDLKGGY
Sbjct: 121 ANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164

Query: 236  295
           
Sbjct: 181  164

Query: 296  355
           
Sbjct: 241  164

Query: 356  415
           
Sbjct: 301  164

Query: 416  475
           
Sbjct: 361  164

Query: 476  535
           
Sbjct: 421  164

Query: 536  548
           
Sbjct: 481  164

[Close]
BLAST of MU54433 vs. TAIR10
Match: AT1G09690.1 (AT1G09690.1 Translation protein SH3-like family protein)

HSP 1 Score: 302.0 bits (772), Expect = 3.5e-82
Identity = 138/164 (84.15%), Postives = 151/164 (92.07%), Query Frame = 2 

Query: 56  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 115
           MPAGHG+R+RTRDLFARPFRKKGYI L+TYLRT+K+GDYVD+KVNGA+HKGMPHKFYHGR
Sbjct: 1   MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60

Query: 116 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVKNDELKAEAK 175
           TGR+WNVTKRA+GVE+NKQ+GNRII+KRIHVRVEHVQ SRC EEF+LRK KNDELKA AK
Sbjct: 61  TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAK 120

Query: 176 AKGVVICTKRQPEGPKPGFMVEGALMETVTPIPYDVVNDLKGGY 235
           A G  I TKRQP+GPKPGFMVEG  +ETVTPIPYDVVNDLKGGY
Sbjct: 121 ANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164

Query: 236  295
           
Sbjct: 181  164

Query: 296  355
           
Sbjct: 241  164

Query: 356  415
           
Sbjct: 301  164

Query: 416  475
           
Sbjct: 361  164

Query: 476  535
           
Sbjct: 421  164

Query: 536  548
           
Sbjct: 481  164

[Close]
BLAST of MU54433 vs. TAIR10
Match: AT1G57660.1 (AT1G57660.1 Translation protein SH3-like family protein)

HSP 1 Score: 299.7 bits (766), Expect = 1.7e-81
Identity = 136/164 (82.93%), Postives = 152/164 (92.68%), Query Frame = 2 

Query: 56  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 115
           MPAGHG+R+RTRDLFARPFRKKGYI L+TYLRT+K+GDYVD+KVNGA+HKGMPHKFYHGR
Sbjct: 1   MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60

Query: 116 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVKNDELKAEAK 175
           TGR+WNVTKRA+GVE+NKQ+GNRII+KRIHVRVEHVQ SRC EEF+LRK +ND LKA+AK
Sbjct: 61  TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAK 120

Query: 176 AKGVVICTKRQPEGPKPGFMVEGALMETVTPIPYDVVNDLKGGY 235
           A+G  I TKRQP+GPKPGFMVEG  +ETVTPIPYDVVNDLKGGY
Sbjct: 121 ARGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164

Query: 236  295
           
Sbjct: 181  164

Query: 296  355
           
Sbjct: 241  164

Query: 356  415
           
Sbjct: 301  164

Query: 416  475
           
Sbjct: 361  164

Query: 476  535
           
Sbjct: 421  164

Query: 536  548
           
Sbjct: 481  164

[Close]
BLAST of MU54433 vs. TAIR10
Match: AT1G57860.1 (AT1G57860.1 Translation protein SH3-like family protein)

HSP 1 Score: 299.7 bits (766), Expect = 1.7e-81
Identity = 136/164 (82.93%), Postives = 152/164 (92.68%), Query Frame = 2 

Query: 56  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 115
           MPAGHG+R+RTRDLFARPFRKKGYI L+TYLRT+K+GDYVD+KVNGA+HKGMPHKFYHGR
Sbjct: 1   MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60

Query: 116 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVKNDELKAEAK 175
           TGR+WNVTKRA+GVE+NKQ+GNRII+KRIHVRVEHVQ SRC EEF+LRK +ND LKA+AK
Sbjct: 61  TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAK 120

Query: 176 AKGVVICTKRQPEGPKPGFMVEGALMETVTPIPYDVVNDLKGGY 235
           A+G  I TKRQP+GPKPGFMVEG  +ETVTPIPYDVVNDLKGGY
Sbjct: 121 ARGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164

Query: 236  295
           
Sbjct: 181  164

Query: 296  355
           
Sbjct: 241  164

Query: 356  415
           
Sbjct: 301  164

Query: 416  475
           
Sbjct: 361  164

Query: 476  535
           
Sbjct: 421  164

Query: 536  548
           
Sbjct: 481  164

[Close]
BLAST of MU54433 vs. NCBI nr
Match: gi|659084684|ref|XP_008443016.1| (PREDICTED: 60S ribosomal protein L21-1 [Cucumis melo])

HSP 1 Score: 340.1 bits (871), Expect = 3.3e-90
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 2 

Query: 56  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 115
           MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60

Query: 116 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVKNDELKAEAK 175
           TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVKNDELKAEAK
Sbjct: 61  TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVKNDELKAEAK 120

Query: 176 AKGVVICTKRQPEGPKPGFMVEGALMETVTPIPYDVVNDLKGGY 235
           AKGVVICTKRQPEGPKPGFMVEGALMETVTPIPYDVVNDLKGGY
Sbjct: 121 AKGVVICTKRQPEGPKPGFMVEGALMETVTPIPYDVVNDLKGGY 164

Query: 236  295
           
Sbjct: 181  164

Query: 296  355
           
Sbjct: 241  164

Query: 356  415
           
Sbjct: 301  164

Query: 416  475
           
Sbjct: 361  164

Query: 476  535
           
Sbjct: 421  164

Query: 536  548
           
Sbjct: 481  164

[Close]
BLAST of MU54433 vs. NCBI nr
Match: gi|778684693|ref|XP_004140433.2| (PREDICTED: 60S ribosomal protein L21-1 [Cucumis sativus])

HSP 1 Score: 337.0 bits (863), Expect = 2.8e-89
Identity = 162/164 (98.78%), Postives = 163/164 (99.39%), Query Frame = 2 

Query: 56  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 115
           MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60

Query: 116 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVKNDELKAEAK 175
           TG+VWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVKNDELKAEAK
Sbjct: 61  TGQVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVKNDELKAEAK 120

Query: 176 AKGVVICTKRQPEGPKPGFMVEGALMETVTPIPYDVVNDLKGGY 235
           AKG VICTKRQPEGPKPGFMVEGALMETVTPIPYDVVNDLKGGY
Sbjct: 121 AKGTVICTKRQPEGPKPGFMVEGALMETVTPIPYDVVNDLKGGY 164

Query: 236  295
           
Sbjct: 181  164

Query: 296  355
           
Sbjct: 241  164

Query: 356  415
           
Sbjct: 301  164

Query: 416  475
           
Sbjct: 361  164

Query: 476  535
           
Sbjct: 421  164

Query: 536  548
           
Sbjct: 481  164

[Close]
BLAST of MU54433 vs. NCBI nr
Match: gi|414447252|gb|AFW99820.1| (60S ribosomal protein L21 [Gossypium hirsutum])

HSP 1 Score: 322.8 bits (826), Expect = 5.5e-85
Identity = 151/164 (92.07%), Postives = 161/164 (98.17%), Query Frame = 2 

Query: 56  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 115
           MPAGHGLRSRTRDLF+RPFRKKGYI L+TYLRTYKIGDYVD+KVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFSRPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60

Query: 116 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVKNDELKAEAK 175
           TGRVWNVTKRAIGVE+NKQVGNRII+KRIHVRVEHVQPSRCTEEF+LRK+KND+LKAEAK
Sbjct: 61  TGRVWNVTKRAIGVEVNKQVGNRIIRKRIHVRVEHVQPSRCTEEFKLRKIKNDQLKAEAK 120

Query: 176 AKGVVICTKRQPEGPKPGFMVEGALMETVTPIPYDVVNDLKGGY 235
           AKG VI TKRQPEGPKPGFMVEGA++ETVTPIPYDVVNDLKGGY
Sbjct: 121 AKGEVISTKRQPEGPKPGFMVEGAMLETVTPIPYDVVNDLKGGY 164

Query: 236  295
           
Sbjct: 181  164

Query: 296  355
           
Sbjct: 241  164

Query: 356  415
           
Sbjct: 301  164

Query: 416  475
           
Sbjct: 361  164

Query: 476  535
           
Sbjct: 421  164

Query: 536  548
           
Sbjct: 481  164

[Close]
BLAST of MU54433 vs. NCBI nr
Match: gi|823174045|ref|XP_012485652.1| (PREDICTED: 60S ribosomal protein L21-1-like [Gossypium raimondii])

HSP 1 Score: 322.4 bits (825), Expect = 7.1e-85
Identity = 150/164 (91.46%), Postives = 161/164 (98.17%), Query Frame = 2 

Query: 56  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 115
           MPAGHGLRSRTRDLF+RPFRKKGYI L+TYLRTYKIGDYVD+KVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFSRPFRKKGYIPLSTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60

Query: 116 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVKNDELKAEAK 175
           TGRVWN+TKRAIGVE+NKQVGNRII+KRIHVRVEHVQPSRCTEEF+LRK+KND+LKAEAK
Sbjct: 61  TGRVWNITKRAIGVEVNKQVGNRIIRKRIHVRVEHVQPSRCTEEFKLRKIKNDQLKAEAK 120

Query: 176 AKGVVICTKRQPEGPKPGFMVEGALMETVTPIPYDVVNDLKGGY 235
           AKG VI TKRQPEGPKPGFMVEGA++ETVTPIPYDVVNDLKGGY
Sbjct: 121 AKGEVISTKRQPEGPKPGFMVEGAMLETVTPIPYDVVNDLKGGY 164

Query: 236  295
           
Sbjct: 181  164

Query: 296  355
           
Sbjct: 241  164

Query: 356  415
           
Sbjct: 301  164

Query: 416  475
           
Sbjct: 361  164

Query: 476  535
           
Sbjct: 421  164

Query: 536  548
           
Sbjct: 481  164

[Close]
BLAST of MU54433 vs. NCBI nr
Match: gi|573923618|ref|XP_006649384.1| (PREDICTED: 60S ribosomal protein L21-1 [Oryza brachyantha])

HSP 1 Score: 322.4 bits (825), Expect = 7.1e-85
Identity = 153/164 (93.29%), Postives = 159/164 (96.95%), Query Frame = 2 

Query: 56  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 115
           MPAGHGLRSRTRDLFARPFRKKGYI LTTYLRTYKIGDYVD+KVNGAVHKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60

Query: 116 TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCTEEFRLRKVKNDELKAEAK 175
           TGRVWNVTKRAIGVEINKQVGNRII+KRIHVRVEHVQPSRCTEE RLRK+KND+LKAEAK
Sbjct: 61  TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCTEELRLRKIKNDQLKAEAK 120

Query: 176 AKGVVICTKRQPEGPKPGFMVEGALMETVTPIPYDVVNDLKGGY 235
           A+G VI TKRQPEGPKPGFMVEGA +ETVTPIPYDVVNDLKGGY
Sbjct: 121 ARGEVISTKRQPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 164

Query: 236  295
           
Sbjct: 181  164

Query: 296  355
           
Sbjct: 241  164

Query: 356  415
           
Sbjct: 301  164

Query: 416  475
           
Sbjct: 361  164

Query: 476  535
           
Sbjct: 421  164

Query: 536  548
           
Sbjct: 481  164

The following BLAST results are available for this feature:
BLAST of MU54433 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RL211_ARATH6.2e-8184.1560S ribosomal protein L21-1 OS=Arabidopsis thaliana GN=RPL21A PE=2 SV=2[more]
RL212_ARATH3.1e-8082.9360S ribosomal protein L21-2 OS=Arabidopsis thaliana GN=RPL21E PE=2 SV=1[more]
RL21A_YEAST8.8e-4353.5060S ribosomal protein L21-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S2... [more]
RL21B_YEAST2.0e-4252.8760S ribosomal protein L21-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S2... [more]
RL21_CYAPA5.7e-4256.9660S ribosomal protein L21 OS=Cyanophora paradoxa GN=RPL21 PE=2 SV=1[more]
BLAST of MU54433 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LEZ0_CUCSA2.0e-8998.78Uncharacterized protein OS=Cucumis sativus GN=Csa_3G797610 PE=4 SV=1[more]
A0A0B0MJE8_GOSAR3.8e-8592.0760S ribosomal L21-1-like protein OS=Gossypium arboreum GN=F383_17279 PE=4 SV=1[more]
A0A0U1WT33_GOSHI3.8e-8592.0760S ribosomal protein L21 OS=Gossypium hirsutum PE=2 SV=1[more]
A0A0D2SXW0_GOSRA5.0e-8591.46Uncharacterized protein OS=Gossypium raimondii GN=B456_006G144200 PE=4 SV=1[more]
J3LJV3_ORYBR5.0e-8593.29Uncharacterized protein OS=Oryza brachyantha PE=4 SV=1[more]
BLAST of MU54433 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G09590.13.5e-8284.15 Translation protein SH3-like family protein[more]
AT1G09690.13.5e-8284.15 Translation protein SH3-like family protein[more]
AT1G57660.11.7e-8182.93 Translation protein SH3-like family protein[more]
AT1G57860.11.7e-8182.93 Translation protein SH3-like family protein[more]
BLAST of MU54433 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659084684|ref|XP_008443016.1|3.3e-90100.00PREDICTED: 60S ribosomal protein L21-1 [Cucumis melo][more]
gi|778684693|ref|XP_004140433.2|2.8e-8998.78PREDICTED: 60S ribosomal protein L21-1 [Cucumis sativus][more]
gi|414447252|gb|AFW99820.1|5.5e-8592.0760S ribosomal protein L21 [Gossypium hirsutum][more]
gi|823174045|ref|XP_012485652.1|7.1e-8591.46PREDICTED: 60S ribosomal protein L21-1-like [Gossypium raimondii][more]
gi|573923618|ref|XP_006649384.1|7.1e-8593.29PREDICTED: 60S ribosomal protein L21-1 [Oryza brachyantha][more]
Annotated Terms
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR001147Ribosomal_L21e
IPR008991Translation_prot_SH3-like_sf
IPR018259Ribosomal_L21e_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This transcribed_cluster is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005622 intracellular
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C009600MELO3C009600gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
AA6YL22FM1AA6YL22FM1EST
AI34D08AI34D08EST
BA10YF15FM1BA10YF15FM1EST
BA2YP03FM1BA2YP03FM1EST
CA11YN16FM1CA11YN16FM1EST
CA15YK20FM1CA15YK20FM1EST
CA22YG18FM1CA22YG18FM1EST
CA3YM06FM1CA3YM06FM1EST
DA2YC24FM1DA2YC24FM1EST
DA3YH07FM1DA3YH07FM1EST
FR14O10FR14O10EST
FR15I12FR15I12EST
FR17P17FR17P17EST
FR18N5FR18N5EST
GA18YH12FM1GA18YH12FM1EST
GA26YN15FM1GA26YN15FM1EST
GA33YI18FM1GA33YI18FM1EST
GA50YP15FM1GA50YP15FM1EST
GA6YH21FM1GA6YH21FM1EST
IA11YG22FM1IA11YG22FM1EST
IA17YN17FM1IA17YN17FM1EST
IA29YH19FM1IA29YH19FM1EST
KA10YL23FM1KA10YL23FM1EST
LA9YG10FM1LA9YG10FM1EST
PH11A4PH11A4EST
VEa0016J09VEa0016J09EST


InterPro
Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001147Ribosomal protein L21eGENE3DG3DSA:2.30.30.70coord: 1..99
score: 5.1
IPR001147Ribosomal protein L21ePANTHERPTHR2098160S RIBOSOMAL PROTEIN L21coord: 2..158
score: 3.4E
IPR001147Ribosomal protein L21ePFAMPF01157Ribosomal_L21ecoord: 5..99
score: 7.3
IPR008991Translation protein SH3-like domainunknownSSF50104Translation proteins SH3-like domaincoord: 3..99
score: 3.01
IPR018259Ribosomal protein L21e, conserved sitePROSITEPS01171RIBOSOMAL_L21Ecoord: 37..62
scor