MU52942 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU52942
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Cryptochrome 2
Location	chr10 : 18518124 .. 18520784 (+)
Sequence length	939

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

ACCCACGCCGAAACGTAACCCACGCTGAATCCGTATTTGTATTTCACGATACCCACGATACCCACGCTGTCTCTGTATTTCACGATACGCACGCTGAAGGCGTTGTCTCTATATTACACGATACCCACGCTGAATCCGTAAAGGGTTCTTGAGTTTTTCGAATAAGAGGATGTTGGTTTAAGCAATTGAGGGGACCATGGAATCATTGTGGTTCCTCTCATAGATTTTGATTTCTGAGGTGTTGAGAAGGCTTTAACCTTTTTCTCACTGAAATGGATGGTGGAAGCTCTGAATCCCCAAATATGGGTTGTAAGAAGACCATAGTATGGTTTCGTAGAGACCTTAGGATTGAGGACAACCCTGCTTTAGCTGCTGCTACTAGGAATGGTTTTGTATATCCTGTGTACATATGGTGTCCTAAAGAGAAGGGACAATTCTATCCTGGTCAAGTATCGAGGTGGTGGTTGAAGCAATCCCTTGCCTATTTGAAACAGTCACTTAAATCACTTGGTGCTGACCTAGTGCTGATGAAAACTCAGAGTACTATTCTCTCTTCTAGAGTGTATCAATGCTACTGGGGCAACAAAAGTAGCATTTAACTGTCTCTTCGATCCCATTTCACTTGTCCGAGACCACAATATTAAAGAAGAACTAGTTGAACTCGAAATTTCCATGCAGAGCTACAATGCAGATCTTTTATATGAGCCATAGGACGTAAATGATGAAAATTGGAATGCTTTTACGACCTTCAAAGAATATTGGGATAAATGTCATCTTTTGAAAAAGGAGTTGGTTTCAACTCTCCCTCCATGGAACCTACAGCAGGCTGCAGGTACAATTCTGACATTACCTATATGTAATAACTGTTGAATAATTCCTCCTTGACGATACTTGATACATCCTCTGGTACTTCTATGATTGATATTTGTAATACTTCTG

Library


Library category	ESTs
melon A library	1
melon AI library	1

Homology

[Close]

BLAST of MU52942 vs. Swiss-Prot
Match: CRY1_SINAL (Cryptochrome-1 OS=Sinapis alba GN=PHR1 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 7.3e-31
Identity = 61/87 (70.11%), Postives = 73/87 (83.91%), Query Frame = 3


Query: 312 KKTIVWFRRDLRIEDNPALAAATRNGFVYPVYIWCPKEKGQFYPGQVSRWWLKQSLAYLK 371
           KKTIVWFRRDLRIEDNPALAAA   G V+PV+IWCP+E+GQFYPG+ SRWW+KQSLA+L+
Sbjct: 5   KKTIVWFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQFYPGRASRWWMKQSLAHLR 64

Query: 372 QSLKSLGADLVLMKTQSTILSSRVYQC 431
           QSLK+LG++L L+KT ST+  S +  C
Sbjct: 65  QSLKALGSELTLIKTHSTV--SAILDC 89

Query: 432  491
           
Sbjct: 125  89

Query: 492  551
           
Sbjct: 185  89

Query: 552  573
           
Sbjct: 245  89

HSP 2 Score: 83.6 bits (205), Expect = 4.3e-15
Identity = 46/99 (46.46%), Postives = 56/99 (56.57%), Query Frame = 1


Query: 550 SLLECINATGATKVAFNCLFDPISLVRDHNIKEELVELEISMQSYNADLLYEP*DVNDEN 609
           ++L+C+ ATGATKV FN L+DP+SLVRDH +KE+LVE  IS+QSYN DL   P     + 
Sbjct: 85  AILDCVRATGATKVVFNHLYDPVSLVRDHTVKEKLVERGISVQSYNGDLCMSPGRYTVKR 144

Query: 610 WNAFTTFKEYWDKCHLLKKELVSTLPPWNLQ--QAAGTI 669
            N          KC  +  E V   PPW L    AA T+
Sbjct: 145 ANLLLVLILTGKKCLDMSVESVVLPPPWRLMPLSAAETV 183

Query: 670  729
           
Sbjct: 205  183

Query: 730  789
           
Sbjct: 265  183

Query: 790  841
           
Sbjct: 325  183

[Close]

BLAST of MU52942 vs. Swiss-Prot
Match: CRY2_ARATH (Cryptochrome-2 OS=Arabidopsis thaliana GN=CRY2 PE=1 SV=2)

HSP 1 Score: 136.0 bits (341), Expect = 7.3e-31
Identity = 62/87 (71.26%), Postives = 72/87 (82.76%), Query Frame = 3


Query: 312 KKTIVWFRRDLRIEDNPALAAATRNGFVYPVYIWCPKEKGQFYPGQVSRWWLKQSLAYLK 371
           KKTIVWFRRDLRIEDNPALAAA   G V+PV+IWCP+E+GQFYPG+ SRWW+KQSLA+L 
Sbjct: 5   KKTIVWFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQFYPGRASRWWMKQSLAHLS 64

Query: 372 QSLKSLGADLVLMKTQSTILSSRVYQC 431
           QSLK+LG+DL L+KT +TI  S +  C
Sbjct: 65  QSLKALGSDLTLIKTHNTI--SAILDC 89

Query: 432  491
           
Sbjct: 125  89

Query: 492  551
           
Sbjct: 185  89

Query: 552  573
           
Sbjct: 245  89

HSP 2 Score: 109.0 bits (271), Expect = 9.5e-23
Identity = 51/90 (56.67%), Postives = 61/90 (67.78%), Query Frame = 1


Query: 550 SLLECINATGATKVAFNCLFDPISLVRDHNIKEELVELEISMQSYNADLLYEP*DVNDEN 609
           ++L+CI  TGATKV FN L+DP+SLVRDH +KE+LVE  IS+QSYN DLLYEP ++  E 
Sbjct: 85  AILDCIRVTGATKVVFNHLYDPVSLVRDHTVKEKLVERGISVQSYNGDLLYEPWEIYCEK 144

Query: 610 WNAFTTFKEYWDKCHLLKKELVSTLPPWNL 669
              FT+F  YW KC  +  E V   PPW L
Sbjct: 145 GKPFTSFNSYWKKCLDMSIESVMLPPPWRL 174

Query: 670  729
           
Sbjct: 205  174

Query: 730  789
           
Sbjct: 265  174

Query: 790  820
           
Sbjct: 325  174

[Close]

BLAST of MU52942 vs. Swiss-Prot
Match: CRY1_ARATH (Cryptochrome-1 OS=Arabidopsis thaliana GN=CRY1 PE=1 SV=2)

HSP 1 Score: 105.9 bits (263), Expect = 8.0e-22
Identity = 50/94 (53.19%), Postives = 65/94 (69.15%), Query Frame = 3


Query: 273 MDGGSSESPNMGCKKTIVWFRRDLRIEDNPALAAATRNGFVYPVYIWCPKEKGQFYPGQV 332
           M G  S   + GC  +IVWFRRDLR+EDNPALAAA R G V  +++W P+E+G ++PG+V
Sbjct: 1   MSGSVSGCGSGGC--SIVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRV 60

Query: 333 SRWWLKQSLAYLKQSLKSLGADLVLMKTQSTILS 392
           SRWWLK SLA L  SL+SLG  L+  ++  ++ S
Sbjct: 61  SRWWLKNSLAQLDSSLRSLGTCLITKRSTDSVAS 92

Query: 393  452
           
Sbjct: 121  92

Query: 453  512
           
Sbjct: 181  92

Query: 513  555
           
Sbjct: 241  92

HSP 2 Score: 82.8 bits (203), Expect = 7.3e-15
Identity = 39/87 (44.83%), Postives = 57/87 (65.52%), Query Frame = 1


Query: 550 SLLECINATGATKVAFNCLFDPISLVRDHNIKEELVELEISMQSYNADLLYEP*DVNDEN 609
           SLL+ + +TGA+++ FN L+DP+SLVRDH  K+ L    I+++S+NADLLYEP +V DE 
Sbjct: 92  SLLDVVKSTGASQIFFNHLYDPLSLVRDHRAKDVLTAQGIAVRSFNADLLYEPWEVTDEL 151

Query: 610 WNAFTTFKEYWDKCHLLKKELVSTLPP 669
              F+ F  +W++C  +  +  S L P
Sbjct: 152 GRPFSMFAAFWERCLSMPYDPESPLLP 178

Query: 670  729
           
Sbjct: 212  178

Query: 730  789
           
Sbjct: 272  178

Query: 790  811
           
Sbjct: 332  178

[Close]

BLAST of MU52942 vs. Swiss-Prot
Match: PHRA_AGRFC (Deoxyribodipyrimidine photo-lyase OS=Agrobacterium fabrum (strain C58 / ATCC 33970) GN=phrA PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.9e-08
Identity = 36/70 (51.43%), Postives = 39/70 (55.71%), Query Frame = 3


Query: 321 IVWFRRDLRIEDNPALAAATRNGF-VYPVYIWCPKEKGQFYPGQVSRWWLKQSLAYLKQS 380
           IVWFR+DLR+ DN AL AA  +G  V PVYI   +EK     G    WWL  SLA L  S
Sbjct: 9   IVWFRKDLRLSDNLALLAAVEHGGPVIPVYI---REKSAGPLGGAQEWWLHHSLAALSSS 68

Query: 381 LKSLGADLVL 440
           L+  G  LVL
Sbjct: 69  LEKAGGRLVL 75

Query: 441  500
           
Sbjct: 129  75

Query: 501  528
           
Sbjct: 189  75

[Close]

BLAST of MU52942 vs. Swiss-Prot
Match: CRY2_CHICK (Cryptochrome-2 OS=Gallus gallus GN=CRY2 PE=2 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 8.1e-06
Identity = 37/101 (36.63%), Postives = 55/101 (54.46%), Query Frame = 3


Query: 285 SSESPNMGCKKTIVWFRRDLRIEDNPALAAATRN-GFVYPVYIWCPKEKGQFYPGQVSRW 344
           ++ SP  G  +++ WFRR LR+ DNPAL AA R    +  +YI  P        G ++RW
Sbjct: 3   AAASPPRGFCRSVHWFRRGLRLHDNPALQAALRGAASLRCIYILDPWFAASSAVG-INRW 62

Query: 345 -WLKQSLAYLKQSLKSLGADLVLMKTQSTILSSRVYQCYWG 404
            +L QSL  L  SL+ L + L +++ Q T +  R+++  WG
Sbjct: 63  RFLLQSLEDLDNSLRKLNSRLFVVRGQPTDVFPRLFK-EWG 101

Query: 405  464
           
Sbjct: 123  101

Query: 465  524
           
Sbjct: 183  101

Query: 525  582
           
Sbjct: 243  101

[Close]

BLAST of MU52942 vs. TrEMBL
Match: V4U2K0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004525mg PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 6.0e-32
Identity = 67/82 (81.71%), Postives = 76/82 (92.68%), Query Frame = 3


Query: 303 MGCKKTIVWFRRDLRIEDNPALAAATRNGFVYPVYIWCPKEKGQFYPGQVSRWWLKQSLA 362
           MG  +TIVWFRRDLRIEDNPALAAA R+G V+PVYIWCPKE+GQFYPG+VSRWWLKQSL+
Sbjct: 1   MGGNRTIVWFRRDLRIEDNPALAAAARDGSVFPVYIWCPKEEGQFYPGRVSRWWLKQSLS 60

Query: 363 YLKQSLKSLGADLVLMKTQSTI 422
           YL QSLKSLGA+LVL KT+ST+
Sbjct: 61  YLGQSLKSLGAELVLFKTESTL 82

Query: 423  482
           
Sbjct: 121  82

Query: 483  542
           
Sbjct: 181  82

Query: 543  549
           
Sbjct: 241  82

[Close]

BLAST of MU52942 vs. TrEMBL
Match: V4U2K0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004525mg PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.4e-28
Identity = 66/99 (66.67%), Postives = 78/99 (78.79%), Query Frame = 1


Query: 544 LFSLLECINATGATKVAFNCLFDPISLVRDHNIKEELVELEISMQSYNADLLYEP*DVND 603
           L +LLECI+A  ATKV FN L+DP+SLVRDH+IKE+LVEL IS+QSYN DLLYEP ++ D
Sbjct: 82  LAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKLVELGISVQSYNGDLLYEPWEIYD 141

Query: 604 ENWNAFTTFKEYWDKCHLLKKELVSTLPPWNLQQAAGTI 663
           E  +AFTTF  YWDKC  ++ E  S LPPW L QAAGTI
Sbjct: 142 ERGHAFTTFDAYWDKCLQMQMEPASILPPWRLVQAAGTI 180

Query: 664  723
           
Sbjct: 202  180

Query: 724  783
           
Sbjct: 262  180

Query: 784  841
           
Sbjct: 322  180

HSP 2 Score: 146.4 bits (368), Expect = 6.0e-32
Identity = 67/82 (81.71%), Postives = 76/82 (92.68%), Query Frame = 3


Query: 303 MGCKKTIVWFRRDLRIEDNPALAAATRNGFVYPVYIWCPKEKGQFYPGQVSRWWLKQSLA 362
           MG  +TIVWFRRDLRIEDNPALAAA R+G V+PVYIWCPKE+GQFYPG+VSRWWLKQSL+
Sbjct: 1   MGGNRTIVWFRRDLRIEDNPALAAAARDGSVFPVYIWCPKEEGQFYPGRVSRWWLKQSLS 60

Query: 363 YLKQSLKSLGADLVLMKTQSTI 422
           YL QSLKSLGA+LVL KT+ST+
Sbjct: 61  YLGQSLKSLGAELVLFKTESTL 82

Query: 423  482
           
Sbjct: 121  82

Query: 483  542
           
Sbjct: 181  82

Query: 543  549
           
Sbjct: 241  82

[Close]

BLAST of MU52942 vs. TrEMBL
Match: V4S3U4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004525mg PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.4e-28
Identity = 66/99 (66.67%), Postives = 78/99 (78.79%), Query Frame = 1


Query: 544 LFSLLECINATGATKVAFNCLFDPISLVRDHNIKEELVELEISMQSYNADLLYEP*DVND 603
           L +LLECI+A  ATKV FN L+DP+SLVRDH+IKE+LVEL IS+QSYN DLLYEP ++ D
Sbjct: 82  LAALLECISAIKATKVVFNHLYDPVSLVRDHSIKEKLVELGISVQSYNGDLLYEPWEIYD 141

Query: 604 ENWNAFTTFKEYWDKCHLLKKELVSTLPPWNLQQAAGTI 663
           E  +AFTTF  YWDKC  ++ E  S LPPW L QAAGTI
Sbjct: 142 ERGHAFTTFDAYWDKCLQMQMEPASILPPWRLVQAAGTI 180

Query: 664  723
           
Sbjct: 202  180

Query: 724  783
           
Sbjct: 262  180

Query: 784  841
           
Sbjct: 322  180

HSP 2 Score: 146.0 bits (367), Expect = 7.8e-32
Identity = 66/82 (80.49%), Postives = 77/82 (93.90%), Query Frame = 3


Query: 303 MGCKKTIVWFRRDLRIEDNPALAAATRNGFVYPVYIWCPKEKGQFYPGQVSRWWLKQSLA 362
           M   KTIVWFRRDLRI+DNPALAAA RNG V+PV+IWCPKE+GQFYPG+VSRWWLKQSLA
Sbjct: 1   MSSSKTIVWFRRDLRIDDNPALAAAARNGSVFPVFIWCPKEEGQFYPGRVSRWWLKQSLA 60

Query: 363 YLKQSLKSLGADLVLMKTQSTI 422
           +L+QSL+SLGA+LVL+KTQST+
Sbjct: 61  HLEQSLRSLGAELVLIKTQSTL 82

Query: 423  482
           
Sbjct: 121  82

Query: 483  542
           
Sbjct: 181  82

Query: 543  549
           
Sbjct: 241  82

[Close]

BLAST of MU52942 vs. TrEMBL
Match: A0A061ENT7_THECC (Cryptochrome 2 isoform 3 OS=Theobroma cacao GN=TCM_020885 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.4e-28
Identity = 63/99 (63.64%), Postives = 76/99 (76.77%), Query Frame = 1


Query: 544 LFSLLECINATGATKVAFNCLFDPISLVRDHNIKEELVELEISMQSYNADLLYEP*DVND 603
           L +LL+CINATGATKV FN L+DP+SLVRDH IKE+L E+ IS+QSYN DLLYEP ++ D
Sbjct: 82  LSALLDCINATGATKVVFNHLYDPVSLVRDHGIKEKLAEIGISVQSYNGDLLYEPWEIYD 141

Query: 604 ENWNAFTTFKEYWDKCHLLKKELVSTLPPWNLQQAAGTI 663
           E   AFTTF  YWDKC  ++ E +  LPPW L  AAGT+
Sbjct: 142 EKGQAFTTFDAYWDKCLNMQTEPIPLLPPWRLVPAAGTV 180

Query: 664  723
           
Sbjct: 202  180

Query: 724  783
           
Sbjct: 262  180

Query: 784  841
           
Sbjct: 322  180

HSP 2 Score: 146.0 bits (367), Expect = 7.8e-32
Identity = 66/82 (80.49%), Postives = 77/82 (93.90%), Query Frame = 3


Query: 303 MGCKKTIVWFRRDLRIEDNPALAAATRNGFVYPVYIWCPKEKGQFYPGQVSRWWLKQSLA 362
           M   KTIVWFRRDLRI+DNPALAAA RNG V+PV+IWCPKE+GQFYPG+VSRWWLKQSLA
Sbjct: 1   MSSSKTIVWFRRDLRIDDNPALAAAARNGSVFPVFIWCPKEEGQFYPGRVSRWWLKQSLA 60

Query: 363 YLKQSLKSLGADLVLMKTQSTI 422
           +L+QSL+SLGA+LVL+KTQST+
Sbjct: 61  HLEQSLRSLGAELVLIKTQSTL 82

Query: 423  482
           
Sbjct: 121  82

Query: 483  542
           
Sbjct: 181  82

Query: 543  549
           
Sbjct: 241  82

[Close]

BLAST of MU52942 vs. TrEMBL
Match: A0A061ELW0_THECC (Cryptochrome 2 isoform 1 OS=Theobroma cacao GN=TCM_020885 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.4e-28
Identity = 63/99 (63.64%), Postives = 76/99 (76.77%), Query Frame = 1


Query: 544 LFSLLECINATGATKVAFNCLFDPISLVRDHNIKEELVELEISMQSYNADLLYEP*DVND 603
           L +LL+CINATGATKV FN L+DP+SLVRDH IKE+L E+ IS+QSYN DLLYEP ++ D
Sbjct: 82  LSALLDCINATGATKVVFNHLYDPVSLVRDHGIKEKLAEIGISVQSYNGDLLYEPWEIYD 141

Query: 604 ENWNAFTTFKEYWDKCHLLKKELVSTLPPWNLQQAAGTI 663
           E   AFTTF  YWDKC  ++ E +  LPPW L  AAGT+
Sbjct: 142 EKGQAFTTFDAYWDKCLNMQTEPIPLLPPWRLVPAAGTV 180

Query: 664  723
           
Sbjct: 202  180

Query: 724  783
           
Sbjct: 262  180

Query: 784  841
           
Sbjct: 322  180

HSP 2 Score: 146.0 bits (367), Expect = 7.8e-32
Identity = 66/82 (80.49%), Postives = 77/82 (93.90%), Query Frame = 3


Query: 303 MGCKKTIVWFRRDLRIEDNPALAAATRNGFVYPVYIWCPKEKGQFYPGQVSRWWLKQSLA 362
           M   KTIVWFRRDLRI+DNPALAAA RNG V+PV+IWCPKE+GQFYPG+VSRWWLKQSLA
Sbjct: 1   MSSSKTIVWFRRDLRIDDNPALAAAARNGSVFPVFIWCPKEEGQFYPGRVSRWWLKQSLA 60

Query: 363 YLKQSLKSLGADLVLMKTQSTI 422
           +L+QSL+SLGA+LVL+KTQST+
Sbjct: 61  HLEQSLRSLGAELVLIKTQSTL 82

Query: 423  482
           
Sbjct: 121  82

Query: 483  542
           
Sbjct: 181  82

Query: 543  549
           
Sbjct: 241  82

[Close]

BLAST of MU52942 vs. TAIR10
Match: AT1G04400.2 (AT1G04400.2 cryptochrome 2)

HSP 1 Score: 136.0 bits (341), Expect = 4.1e-32
Identity = 62/87 (71.26%), Postives = 72/87 (82.76%), Query Frame = 3


Query: 312 KKTIVWFRRDLRIEDNPALAAATRNGFVYPVYIWCPKEKGQFYPGQVSRWWLKQSLAYLK 371
           KKTIVWFRRDLRIEDNPALAAA   G V+PV+IWCP+E+GQFYPG+ SRWW+KQSLA+L 
Sbjct: 5   KKTIVWFRRDLRIEDNPALAAAAHEGSVFPVFIWCPEEEGQFYPGRASRWWMKQSLAHLS 64

Query: 372 QSLKSLGADLVLMKTQSTILSSRVYQC 431
           QSLK+LG+DL L+KT +TI  S +  C
Sbjct: 65  QSLKALGSDLTLIKTHNTI--SAILDC 89

Query: 432  491
           
Sbjct: 125  89

Query: 492  551
           
Sbjct: 185  89

Query: 552  573
           
Sbjct: 245  89

HSP 2 Score: 109.0 bits (271), Expect = 5.4e-24
Identity = 51/90 (56.67%), Postives = 61/90 (67.78%), Query Frame = 1


Query: 550 SLLECINATGATKVAFNCLFDPISLVRDHNIKEELVELEISMQSYNADLLYEP*DVNDEN 609
           ++L+CI  TGATKV FN L+DP+SLVRDH +KE+LVE  IS+QSYN DLLYEP ++  E 
Sbjct: 85  AILDCIRVTGATKVVFNHLYDPVSLVRDHTVKEKLVERGISVQSYNGDLLYEPWEIYCEK 144

Query: 610 WNAFTTFKEYWDKCHLLKKELVSTLPPWNL 669
              FT+F  YW KC  +  E V   PPW L
Sbjct: 145 GKPFTSFNSYWKKCLDMSIESVMLPPPWRL 174

Query: 670  729
           
Sbjct: 205  174

Query: 730  789
           
Sbjct: 265  174

Query: 790  820
           
Sbjct: 325  174

[Close]

BLAST of MU52942 vs. TAIR10
Match: AT4G08920.1 (AT4G08920.1 cryptochrome 1)

HSP 1 Score: 105.9 bits (263), Expect = 4.5e-23
Identity = 50/94 (53.19%), Postives = 65/94 (69.15%), Query Frame = 3


Query: 273 MDGGSSESPNMGCKKTIVWFRRDLRIEDNPALAAATRNGFVYPVYIWCPKEKGQFYPGQV 332
           M G  S   + GC  +IVWFRRDLR+EDNPALAAA R G V  +++W P+E+G ++PG+V
Sbjct: 1   MSGSVSGCGSGGC--SIVWFRRDLRVEDNPALAAAVRAGPVIALFVWAPEEEGHYHPGRV 60

Query: 333 SRWWLKQSLAYLKQSLKSLGADLVLMKTQSTILS 392
           SRWWLK SLA L  SL+SLG  L+  ++  ++ S
Sbjct: 61  SRWWLKNSLAQLDSSLRSLGTCLITKRSTDSVAS 92

Query: 393  452
           
Sbjct: 121  92

Query: 453  512
           
Sbjct: 181  92

Query: 513  555
           
Sbjct: 241  92

HSP 2 Score: 82.8 bits (203), Expect = 4.1e-16
Identity = 39/87 (44.83%), Postives = 57/87 (65.52%), Query Frame = 1


Query: 550 SLLECINATGATKVAFNCLFDPISLVRDHNIKEELVELEISMQSYNADLLYEP*DVNDEN 609
           SLL+ + +TGA+++ FN L+DP+SLVRDH  K+ L    I+++S+NADLLYEP +V DE 
Sbjct: 92  SLLDVVKSTGASQIFFNHLYDPLSLVRDHRAKDVLTAQGIAVRSFNADLLYEPWEVTDEL 151

Query: 610 WNAFTTFKEYWDKCHLLKKELVSTLPP 669
              F+ F  +W++C  +  +  S L P
Sbjct: 152 GRPFSMFAAFWERCLSMPYDPESPLLP 178

Query: 670  729
           
Sbjct: 212  178

Query: 730  789
           
Sbjct: 272  178

Query: 790  811
           
Sbjct: 332  178

[Close]

BLAST of MU52942 vs. TAIR10
Match: AT3G15620.1 (AT3G15620.1 DNA photolyase family protein)

HSP 1 Score: 50.4 bits (119), Expect = 2.3e-06
Identity = 32/82 (39.02%), Postives = 47/82 (57.32%), Query Frame = 3


Query: 318 TIVWFRRDLRIEDNPALAAATRNG-FVYPVYIWCP----KEKGQFYPGQ----VSR-WWL 377
           +++WFR+ LR+ DNPAL  A++   F+YPV++  P     +   F PG     V+R  +L
Sbjct: 26  SLIWFRKGLRVHDNPALEYASKGSEFMYPVFVIDPHYMESDPSAFSPGSSRAGVNRIRFL 85

Query: 378 KQSLAYLKQSLKSLGADLVLMK 437
            +SL  L  SLK LG+ L++ K
Sbjct: 86  LESLKDLDSSLKKLGSRLLVFK 107

Query: 438  497
           
Sbjct: 146  107

Query: 498  534
           
Sbjct: 206  107

[Close]

BLAST of MU52942 vs. NCBI nr
Match: gi|659121397|ref|XP_008460640.1| (PREDICTED: cryptochrome-1 [Cucumis melo])

HSP 1 Score: 189.5 bits (480), Expect = 8.8e-45
Identity = 87/94 (92.55%), Postives = 91/94 (96.81%), Query Frame = 3


Query: 273 MDGGSSESPNMGCKKTIVWFRRDLRIEDNPALAAATRNGFVYPVYIWCPKEKGQFYPGQV 332
           MDGGSSESP+MGC KTIVWFRRDLRIEDNPALAAA RNGFVYPVYIWCPKE+GQFYPG+V
Sbjct: 1   MDGGSSESPDMGCNKTIVWFRRDLRIEDNPALAAAARNGFVYPVYIWCPKEEGQFYPGRV 60

Query: 333 SRWWLKQSLAYLKQSLKSLGADLVLMKTQSTILS 392
           SRWWLKQSLA+LKQSLKSLGADLVLMKTQSTI S
Sbjct: 61  SRWWLKQSLAHLKQSLKSLGADLVLMKTQSTIFS 94

Query: 393  452
           
Sbjct: 121  94

Query: 453  512
           
Sbjct: 181  94

Query: 513  555
           
Sbjct: 241  94

[Close]

BLAST of MU52942 vs. NCBI nr
Match: gi|567854201|ref|XP_006420220.1| (hypothetical protein CICLE_v10004525mg [Citrus clementina])

HSP 1 Score: 148.7 bits (374), Expect = 1.7e-32
Identity = 67/82 (81.71%), Postives = 76/82 (92.68%), Query Frame = 3


Query: 303 MGCKKTIVWFRRDLRIEDNPALAAATRNGFVYPVYIWCPKEKGQFYPGQVSRWWLKQSLA 362
           MG  +TIVWFRRDLRIEDNPALAAA R+G V+PVYIWCPKE+GQFYPG+VSRWWLKQSL+
Sbjct: 1   MGGNRTIVWFRRDLRIEDNPALAAAARDGSVFPVYIWCPKEEGQFYPGRVSRWWLKQSLS 60

Query: 363 YLKQSLKSLGADLVLMKTQSTI 422
           YL QSLKSLGA+LVL KT+ST+
Sbjct: 61  YLGQSLKSLGAELVLFKTESTL 82

Query: 423  482
           
Sbjct: 121  82

Query: 483  542
           
Sbjct: 181  82

Query: 543  549
           
Sbjct: 241  82

[Close]

BLAST of MU52942 vs. NCBI nr
Match: gi|567854199|ref|XP_006420219.1| (hypothetical protein CICLE_v10004525mg [Citrus clementina])

HSP 1 Score: 148.7 bits (374), Expect = 1.7e-32
Identity = 67/82 (81.71%), Postives = 76/82 (92.68%), Query Frame = 3


Query: 303 MGCKKTIVWFRRDLRIEDNPALAAATRNGFVYPVYIWCPKEKGQFYPGQVSRWWLKQSLA 362
           MG  +TIVWFRRDLRIEDNPALAAA R+G V+PVYIWCPKE+GQFYPG+VSRWWLKQSL+
Sbjct: 1   MGGNRTIVWFRRDLRIEDNPALAAAARDGSVFPVYIWCPKEEGQFYPGRVSRWWLKQSLS 60

Query: 363 YLKQSLKSLGADLVLMKTQSTI 422
           YL QSLKSLGA+LVL KT+ST+
Sbjct: 61  YLGQSLKSLGAELVLFKTESTL 82

Query: 423  482
           
Sbjct: 121  82

Query: 483  542
           
Sbjct: 181  82

Query: 543  549
           
Sbjct: 241  82

[Close]

BLAST of MU52942 vs. NCBI nr
Match: gi|590659371|ref|XP_007035109.1| (Cryptochrome 2 isoform 1 [Theobroma cacao])

HSP 1 Score: 148.3 bits (373), Expect = 2.3e-32
Identity = 66/82 (80.49%), Postives = 77/82 (93.90%), Query Frame = 3


Query: 303 MGCKKTIVWFRRDLRIEDNPALAAATRNGFVYPVYIWCPKEKGQFYPGQVSRWWLKQSLA 362
           M   KTIVWFRRDLRI+DNPALAAA RNG V+PV+IWCPKE+GQFYPG+VSRWWLKQSLA
Sbjct: 1   MSSSKTIVWFRRDLRIDDNPALAAAARNGSVFPVFIWCPKEEGQFYPGRVSRWWLKQSLA 60

Query: 363 YLKQSLKSLGADLVLMKTQSTI 422
           +L+QSL+SLGA+LVL+KTQST+
Sbjct: 61  HLEQSLRSLGAELVLIKTQSTL 82

Query: 423  482
           
Sbjct: 121  82

Query: 483  542
           
Sbjct: 181  82

Query: 543  549
           
Sbjct: 241  82

[Close]

BLAST of MU52942 vs. NCBI nr
Match: gi|590659375|ref|XP_007035110.1| (Cryptochrome 2 isoform 2 [Theobroma cacao])

HSP 1 Score: 148.3 bits (373), Expect = 2.3e-32
Identity = 66/82 (80.49%), Postives = 77/82 (93.90%), Query Frame = 3


Query: 303 MGCKKTIVWFRRDLRIEDNPALAAATRNGFVYPVYIWCPKEKGQFYPGQVSRWWLKQSLA 362
           M   KTIVWFRRDLRI+DNPALAAA RNG V+PV+IWCPKE+GQFYPG+VSRWWLKQSLA
Sbjct: 1   MSSSKTIVWFRRDLRIDDNPALAAAARNGSVFPVFIWCPKEEGQFYPGRVSRWWLKQSLA 60

Query: 363 YLKQSLKSLGADLVLMKTQSTI 422
           +L+QSL+SLGA+LVL+KTQST+
Sbjct: 61  HLEQSLRSLGAELVLIKTQSTL 82

Query: 423  482
           
Sbjct: 121  82

Query: 483  542
           
Sbjct: 181  82

Query: 543  549
           
Sbjct: 241  82

The following BLAST results are available for this feature:

BLAST of MU52942 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CRY1_SINAL	7.3e-31	70.11	Cryptochrome-1 OS=Sinapis alba GN=PHR1 PE=2 SV=1	[more]
CRY2_ARATH	7.3e-31	71.26	Cryptochrome-2 OS=Arabidopsis thaliana GN=CRY2 PE=1 SV=2	[more]
CRY1_ARATH	8.0e-22	53.19	Cryptochrome-1 OS=Arabidopsis thaliana GN=CRY1 PE=1 SV=2	[more]
PHRA_AGRFC	3.9e-08	51.43	Deoxyribodipyrimidine photo-lyase OS=Agrobacterium fabrum (strain C58 / ATCC 339...	[more]
CRY2_CHICK	8.1e-06	36.63	Cryptochrome-2 OS=Gallus gallus GN=CRY2 PE=2 SV=2	[more]

BLAST of MU52942 vs. TrEMBL


Match Name	E-value	Identity	Description
V4U2K0_9ROSI	6.0e-32	81.71	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004525mg PE=4 SV=1	[more]
V4U2K0_9ROSI	1.4e-28	66.67	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004525mg PE=4 SV=1	[more]
V4S3U4_9ROSI	1.4e-28	66.67	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004525mg PE=4 SV=1	[more]
A0A061ENT7_THECC	2.4e-28	63.64	Cryptochrome 2 isoform 3 OS=Theobroma cacao GN=TCM_020885 PE=4 SV=1	[more]
A0A061ELW0_THECC	2.4e-28	63.64	Cryptochrome 2 isoform 1 OS=Theobroma cacao GN=TCM_020885 PE=4 SV=1	[more]

BLAST of MU52942 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G04400.2	4.1e-32	71.26	cryptochrome 2	[more]
AT4G08920.1	4.5e-23	53.19	cryptochrome 1	[more]
AT3G15620.1	2.3e-06	39.02	DNA photolyase family protein	[more]

BLAST of MU52942 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121397\|ref\|XP_008460640.1\|	8.8e-45	92.55	PREDICTED: cryptochrome-1 [Cucumis melo]	[more]
gi\|567854201\|ref\|XP_006420220.1\|	1.7e-32	81.71	hypothetical protein CICLE_v10004525mg [Citrus clementina]	[more]
gi\|567854199\|ref\|XP_006420219.1\|	1.7e-32	81.71	hypothetical protein CICLE_v10004525mg [Citrus clementina]	[more]
gi\|590659371\|ref\|XP_007035109.1\|	2.3e-32	80.49	Cryptochrome 2 isoform 1 [Theobroma cacao]	[more]
gi\|590659375\|ref\|XP_007035110.1\|	2.3e-32	80.49	Cryptochrome 2 isoform 2 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR006050	DNA_photolyase_N
IPR014729	Rossmann-like_a/b/a_fold

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C018340	MELO3C018340	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
A27A06	A27A06	EST
AI03G12	AI03G12	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006050	DNA photolyase, N-terminal	PFAM	PF00875	DNA_photolyase	coord: 16..89 score: 4.7
IPR006050	DNA photolyase, N-terminal	PROFILE	PS51645	PHR_CRY_ALPHA_BETA	coord: 14..108 score: 25
IPR006050	DNA photolyase, N-terminal	unknown	SSF52425	Cryptochrome/photolyase, N-terminal domain	coord: 14..89 score: 1.83
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	G3DSA:3.40.50.620		coord: 10..90 score: 3.4
None	No IPR available	PANTHER	PTHR11455	CRYPTOCHROME	coord: 15..84 score: 1.7
None	No IPR available	PANTHER	PTHR11455:SF24	CRYPTOCHROME-1	coord: 15..84 score: 1.7