MU52169 (transcribed_cluster) Melon (DHL92) v3.5.1

NameMU52169
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionTelomere repeat-binding protein 4
Locationchr8 : 29367677 .. 29374166 (+)
Sequence length790
The following sequences are available for this feature:

transcribed_cluster sequence

GACATTTCTACTTTTCCGGTTTCGATCCTCCGAACACCATTCGCTCCCCAAATCTTCTCTTCAACCTAAGCTCGGATCTTCACCTTCCTCGCTGGATTGATTGAGCTTAAAAGTAAACAAATTATGGATCAAGAAGTGCATTTCTGCCAGAAGTTCACAAATATGAAATCTCATTGGGTAAAAGTGGAGGGACCTTTTCTTCCTGCACCACTAAATGATTCAAATGAAGTTGAGGATTTACTTGTGGAGTCTAAAAGCGAGCATGTTTTAGGAAATTGTTTGAGAGTTCAAGATTTCTCTTGCGACTTCGGCTATGGAATACAAACAAACGGTGGTGAATTCTTATGATCTATTCCTTATGCTTTTATTGGTGGCTTGGTGCTAATTTGTACTATATTCCCTGAGCTTCCTCCGTCCACGTTGTTTCATCTTTAGCATTAGTTGAAAACTGTAGTCTTATCCTATTTTCTCTATACGTTCAAGATATAAAAAGGGTCTGAGACTCTAAATTGGTCTGAGGTGAATATGTTCAGGAAACCTTTCCTTGTATGTGGACAAATCCAGATTAGTGATGCCAACTATCAAGTTCAACGCAGACTGCATAGACATTTAATTTTTCTTTCCAATAATTTTTTTTACAGTAGTAAGTGATCTAATCCTGGCCAATTTCTTTTATTATCTATAAGGTGGATTGGATTCTAATAGCAAGCAGGGAGGCGAACATGAACTTAAATTTGGAGATCTTGATCAGCTGCTGGATGATGCCAATGAAGTAGGGGAATTCCATGCT
BLAST of MU52169 vs. TrEMBL
Match: M5WGZ0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005692mg PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.3e-08
Identity = 35/83 (42.17%), Postives = 46/83 (55.42%), Query Frame = 1

Query: 124 MDQEVHFCQKFTNMKSHWVKVEGPFLPAPLNDSNEVEDLLVESKSEHV------------ 183
           MD E H   KF NMKS  VKVEG F PA  +++  +E LL E KSE+V            
Sbjct: 1   MDHEAHSRNKFVNMKSQRVKVEGSFAPALEDETETIEHLLAEPKSEYVTVDGVLCCGKEN 60

Query: 184 LGNCLRVQDFSCDFGYGIQTNGG 243
            G C+ ++DFSC + +G+ T  G
Sbjct: 61  AGKCMDIEDFSCGYDFGLNTYSG 83

Query: 244 303
           
Sbjct: 121 83

Query: 304 337
           
Sbjct: 181 83

BLAST of MU52169 vs. NCBI nr
Match: gi|659096672|ref|XP_008449224.1| (PREDICTED: uncharacterized protein LOC103491166 isoform X1 [Cucumis melo])

HSP 1 Score: 157.5 bits (397), Expect = 3.1e-35
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1

Query: 124 MDQEVHFCQKFTNMKSHWVKVEGPFLPAPLNDSNEVEDLLVESKSEHVLGNCLRVQDFSC 183
           MDQEVHFCQKFTNMKSHWVKVEGPFLPAPLNDSNEVEDLLVESKSEHVLGNCLRVQDFSC
Sbjct: 1   MDQEVHFCQKFTNMKSHWVKVEGPFLPAPLNDSNEVEDLLVESKSEHVLGNCLRVQDFSC 60

Query: 184 DFGYGIQTNGG 243
           DFGYGIQTNGG
Sbjct: 61  DFGYGIQTNGG 71

Query: 244 303
           
Sbjct: 121 71

Query: 304 337
           
Sbjct: 181 71

BLAST of MU52169 vs. NCBI nr
Match: gi|659096674|ref|XP_008449225.1| (PREDICTED: uncharacterized protein LOC103491166 isoform X2 [Cucumis melo])

HSP 1 Score: 157.5 bits (397), Expect = 3.1e-35
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1

Query: 124 MDQEVHFCQKFTNMKSHWVKVEGPFLPAPLNDSNEVEDLLVESKSEHVLGNCLRVQDFSC 183
           MDQEVHFCQKFTNMKSHWVKVEGPFLPAPLNDSNEVEDLLVESKSEHVLGNCLRVQDFSC
Sbjct: 1   MDQEVHFCQKFTNMKSHWVKVEGPFLPAPLNDSNEVEDLLVESKSEHVLGNCLRVQDFSC 60

Query: 184 DFGYGIQTNGG 243
           DFGYGIQTNGG
Sbjct: 61  DFGYGIQTNGG 71

Query: 244 303
           
Sbjct: 121 71

Query: 304 337
           
Sbjct: 181 71

BLAST of MU52169 vs. NCBI nr
Match: gi|659096678|ref|XP_008449227.1| (PREDICTED: uncharacterized protein LOC103491166 isoform X4 [Cucumis melo])

HSP 1 Score: 157.5 bits (397), Expect = 3.1e-35
Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 1

Query: 124 MDQEVHFCQKFTNMKSHWVKVEGPFLPAPLNDSNEVEDLLVESKSEHVLGNCLRVQDFSC 183
           MDQEVHFCQKFTNMKSHWVKVEGPFLPAPLNDSNEVEDLLVESKSEHVLGNCLRVQDFSC
Sbjct: 1   MDQEVHFCQKFTNMKSHWVKVEGPFLPAPLNDSNEVEDLLVESKSEHVLGNCLRVQDFSC 60

Query: 184 DFGYGIQTNGG 243
           DFGYGIQTNGG
Sbjct: 61  DFGYGIQTNGG 71

Query: 244 303
           
Sbjct: 121 71

Query: 304 337
           
Sbjct: 181 71

BLAST of MU52169 vs. NCBI nr
Match: gi|659096676|ref|XP_008449226.1| (PREDICTED: uncharacterized protein LOC103491166 isoform X3 [Cucumis melo])

HSP 1 Score: 155.2 bits (391), Expect = 1.6e-34
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 1

Query: 124 MDQEVHFCQKFTNMKSHWVKVEGPFLPAPLNDSNEVEDLLVESKSEHVLGNCLRVQDFSC 183
           MDQEVHFCQKFTNMKSHWVKVEGPFLPAPLNDSNEVEDLLVESKSEHVLGNCLRVQDFSC
Sbjct: 1   MDQEVHFCQKFTNMKSHWVKVEGPFLPAPLNDSNEVEDLLVESKSEHVLGNCLRVQDFSC 60

Query: 184 DFGYGIQTNG 243
           DFGYGIQTNG
Sbjct: 61  DFGYGIQTNG 70

Query: 244 303
           
Sbjct: 121 70

Query: 304 334
           
Sbjct: 181 70

BLAST of MU52169 vs. NCBI nr
Match: gi|778717141|ref|XP_004143262.2| (PREDICTED: uncharacterized protein LOC101219571 isoform X2 [Cucumis sativus])

HSP 1 Score: 151.0 bits (380), Expect = 2.9e-33
Identity = 68/71 (95.77%), Postives = 69/71 (97.18%), Query Frame = 1

Query: 124 MDQEVHFCQKFTNMKSHWVKVEGPFLPAPLNDSNEVEDLLVESKSEHVLGNCLRVQDFSC 183
           MDQEVHFCQKFTNMKSHWVKVE PFLP PLNDSNEVEDLLVESKSEHVLG+CLRVQDFSC
Sbjct: 1   MDQEVHFCQKFTNMKSHWVKVERPFLPTPLNDSNEVEDLLVESKSEHVLGSCLRVQDFSC 60

Query: 184 DFGYGIQTNGG 243
           DFGYGIQTNGG
Sbjct: 61  DFGYGIQTNGG 71

Query: 244 303
           
Sbjct: 121 71

Query: 304 337
           
Sbjct: 181 71

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
M5WGZ0_PRUPE2.3e-0842.17Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005692mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659096672|ref|XP_008449224.1|3.1e-35100.00PREDICTED: uncharacterized protein LOC103491166 isoform X1 [Cucumis melo][more]
gi|659096674|ref|XP_008449225.1|3.1e-35100.00PREDICTED: uncharacterized protein LOC103491166 isoform X2 [Cucumis melo][more]
gi|659096678|ref|XP_008449227.1|3.1e-35100.00PREDICTED: uncharacterized protein LOC103491166 isoform X4 [Cucumis melo][more]
gi|659096676|ref|XP_008449226.1|1.6e-34100.00PREDICTED: uncharacterized protein LOC103491166 isoform X3 [Cucumis melo][more]
gi|778717141|ref|XP_004143262.2|2.9e-3395.77PREDICTED: uncharacterized protein LOC101219571 isoform X2 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C014216MELO3C014216gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
15D41D0815D41D08EST
VEa0001I08VEa0001I08EST