MU50354 (transcribed_cluster) Melon (DHL92) v3.5.1

Overview
NameMU50354
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionChromatin-remodeling complex subunit-like protein
Locationchr5 : 15847169 .. 15854556 (-)
Sequence length910
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

ATGTTCCCTTCTTTCACCTCTCACCACGCGTGGCAAGGCAGTACGACTGGTCAATTGAATCGGTGATTTTGCAGGCTGCCGCTATGGACTAATCGTTAGGGTTTCTGTTTAACCTTTGAATATCAAAAGTATTTCAGAAATCAGAAGACATTTAATTCAGTATTAAACAAGAGTTTATTAAGATGGAGCCGGAGGTGATAGAAGCAGAGTTAGTGTTGCCGATCCACCTTAATTTCAAACGAATTCAAATGTACGAAAAGTATCCTAAAGGCCAATCTAGAGGCAGGCACTGGAAACATTTGAAGCAAATTCTTCAAGCCGAGAACTATAACAATTACTCCCCTGATGAACCCAACTATGTTAATATTGAGTCACCTCCCTCAATGCATCCATGCAAGAGAATTTGTGATATAACAGGATATGAGGCACCATACTATGATCCTAGGACTACTCTTCGATATGCAAATGCTGATATCTTCAAGGTCATAAGATCACTTCCTAATGAGTACGTCCAGAGGTATTTGGCCATGAGAAATGCAGCGGTAGTTTTAAGGTGAAGATATACAACACTTCTGTCGTCGTCGACTTGCAACCCTTCGAGGATACGAAGTGAAACCATTAAGCTTTCCATGTGGTTGAAGATGCAAAGAGAAACCTGTCAAGTAAGCTCAAAATGTATCATATGTCTATTTATTCTATCATTTTGTGTATTTACTTGTCTTTCCAATTCATGTTCGACTTGGTATTTGTTAGCAAAAGTTGAGTCGGTTACTTAGAAATCTCAAGGCTATCAAACAACCCTAATTGGATTGTAGTGAGAAAAATTTAAGGTATATTTACGATTTTTTAAGAAATTGACGTGTTTGATAACTATTTCTATTTTTCGTTTCCAAATTTTAATAAATGTTTC
Homology
[Close]
BLAST of MU50354 vs. Swiss-Prot
Match: IN80C_MOUSE (INO80 complex subunit C OS=Mus musculus GN=Ino80c PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 5.4e-15
Identity = 39/91 (42.86%), Postives = 57/91 (62.64%), Query Frame = 3 

Query: 279 RGRHWKHLKQILQAENYNNYSPDEPNYVNIESPPSMHPCKRICDITGYEAPYYDPRTTLR 338
           + R WK+LKQIL AE    +  ++PNY +I++PPS  P K+  DI+G  A Y DP++ LR
Sbjct: 100 KNRTWKNLKQILAAERALPWQLNDPNYFSIDAPPSFKPAKKYSDISGLLANYTDPQSKLR 159

Query: 339 YANADIFKVIRSLPNEYVQRYLAMRNAAVVL 398
           ++  + F  IR LP++ V  YLA+R A  ++
Sbjct: 160 FSTVEEFSYIRRLPSDVVTGYLALRKATSIV 190

Query: 399  458
           
Sbjct: 220  190

Query: 459  518
           
Sbjct: 280  190

Query: 519  552
           
Sbjct: 340  190

[Close]
BLAST of MU50354 vs. Swiss-Prot
Match: IN80C_HUMAN (INO80 complex subunit C OS=Homo sapiens GN=INO80C PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.1e-14
Identity = 37/91 (40.66%), Postives = 57/91 (62.64%), Query Frame = 3 

Query: 279 RGRHWKHLKQILQAENYNNYSPDEPNYVNIESPPSMHPCKRICDITGYEAPYYDPRTTLR 338
           + R WK+LKQIL +E    +  ++PNY +I++PPS  P K+  D++G  A Y DP++ LR
Sbjct: 101 KNRTWKNLKQILASERALPWQLNDPNYFSIDAPPSFKPAKKYSDVSGLLANYTDPQSKLR 160

Query: 339 YANADIFKVIRSLPNEYVQRYLAMRNAAVVL 398
           ++  + F  IR LP++ V  YLA+R A  ++
Sbjct: 161 FSTIEEFSYIRRLPSDVVTGYLALRKATSIV 191

Query: 399  458
           
Sbjct: 221  191

Query: 459  518
           
Sbjct: 281  191

Query: 519  552
           
Sbjct: 341  191

[Close]
BLAST of MU50354 vs. Swiss-Prot
Match: IN80C_RAT (INO80 complex subunit C OS=Rattus norvegicus GN=Ino80c PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.1e-14
Identity = 37/91 (40.66%), Postives = 56/91 (61.54%), Query Frame = 3 

Query: 279 RGRHWKHLKQILQAENYNNYSPDEPNYVNIESPPSMHPCKRICDITGYEAPYYDPRTTLR 338
           + R WK+LKQIL AE    +  ++PNY +I++PPS  P K+  D++G  A Y DP++ LR
Sbjct: 100 KNRTWKNLKQILAAERALPWQLNDPNYFSIDAPPSFKPAKKYSDVSGLLANYTDPQSKLR 159

Query: 339 YANADIFKVIRSLPNEYVQRYLAMRNAAVVL 398
           ++  + F  IR LP++ V  YL +R A  ++
Sbjct: 160 FSTVEEFSYIRRLPSDVVTGYLTLRKATSIV 190

Query: 399  458
           
Sbjct: 220  190

Query: 459  518
           
Sbjct: 280  190

Query: 519  552
           
Sbjct: 340  190

[Close]
BLAST of MU50354 vs. Swiss-Prot
Match: IES6_SCHPO (Chromatin-remodeling complex subunit ies6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ies6 PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.3e-13
Identity = 40/97 (41.24%), Postives = 62/97 (63.92%), Query Frame = 3 

Query: 264 PKGQSRGRHWKHLKQILQAENYNNYSPDEPNYVNIESPPSMHPCKRICDITGYEAPYYDP 323
           P  +++ R  ++L+QI+Q +   N  P + +Y +IE+PPS+ P  + CD+TG  A Y DP
Sbjct: 22  PNYKAQPRRNRNLRQIIQNDPVQN-EPSKFSYSSIEAPPSVLPQPKYCDVTGLLAIYTDP 81

Query: 324 RTTLRYANADIFKVIRSLPNEYVQRYLAMRNAAVVLR 383
           +T LRY N +I+ +IR LP+   Q YL +R++ VVL+
Sbjct: 82  KTRLRYHNKEIYGLIRELPSGADQEYLKLRSSDVVLK 117

Query: 384  443
           
Sbjct: 142  117

Query: 444  503
           
Sbjct: 202  117

Query: 504  555
           
Sbjct: 262  117

[Close]
BLAST of MU50354 vs. Swiss-Prot
Match: IES6_YEAST (Chromatin-remodeling complex subunit IES6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IES6 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.2e-07
Identity = 25/67 (37.31%), Postives = 40/67 (59.70%), Query Frame = 3 

Query: 357 YVNIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFK-VIRSLPNEYVQRYLAMR 416
           Y ++E+PPS+ P K+ CD+TG +  Y  P   +RY NA+I++ +++ +     Q YL +R
Sbjct: 100 YFSVEAPPSIRPAKKYCDVTGLKGFYKSPTNNIRYHNAEIYQLIVKPMAPGVDQEYLKLR 159

Query: 417 NAAVVLR 476
            A  VL+
Sbjct: 160 GANFVLK 166

Query: 477  536
           
Sbjct: 220  166

Query: 537  555
           
Sbjct: 280  166

[Close]
BLAST of MU50354 vs. TrEMBL
Match: A0A0A0LJN6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G077540 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.8e-65
Identity = 122/124 (98.39%), Postives = 123/124 (99.19%), Query Frame = 3 

Query: 183 MEPEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYNNYSPDEPNYV 242
           ME EVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENY+NYSPDEPNYV
Sbjct: 1   MESEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYV 60

Query: 243 NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 302
           NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA
Sbjct: 61  NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 120

Query: 303 VVLR 362
           VVLR
Sbjct: 121 VVLR 124

Query: 363  422
           
Sbjct: 181  124

Query: 423  482
           
Sbjct: 241  124

Query: 483  542
           
Sbjct: 301  124

Query: 543  555
           
Sbjct: 361  124

[Close]
BLAST of MU50354 vs. TrEMBL
Match: M5VTH2_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024988mg PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 7.0e-62
Identity = 122/176 (69.32%), Postives = 143/176 (81.25%), Query Frame = 3 

Query: 45  DWSIESVILQAAAMD*SLGFLFNL*ISK----VFQKSEDI*FSIKQEFIK--MEPEVIEA 104
           DW +E   + AAA   ++    +L + +    +  +S+ +  S +++F    MEPEV+ A
Sbjct: 69  DWRLERREVSAAAATVAVDVSGHLALVQKWVLILNQSKFVAASHRRDFTSTNMEPEVVHA 128

Query: 105 ELVLPIHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYNNYSPDEPNYVNIESPPSM 164
           ELVLP HL+FKRIQMYEKYPKGQSRGRHWKHLKQI+QAENY NY P+EPNYVNIESPPSM
Sbjct: 129 ELVLPTHLSFKRIQMYEKYPKGQSRGRHWKHLKQIIQAENYQNYPPNEPNYVNIESPPSM 188

Query: 165 HPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAAVVLR 224
           HPCKRICDITGYEAPYYDPRT LRYANADIFK+IRSLPNEYVQRYLA+RNAAVVL+
Sbjct: 189 HPCKRICDITGYEAPYYDPRTGLRYANADIFKLIRSLPNEYVQRYLALRNAAVVLK 244

Query: 225  284
           
Sbjct: 249  244

Query: 285  344
           
Sbjct: 309  244

Query: 345  404
           
Sbjct: 369  244

Query: 405  464
           
Sbjct: 429  244

Query: 465  524
           
Sbjct: 489  244

Query: 525  555
           
Sbjct: 549  244

[Close]
BLAST of MU50354 vs. TrEMBL
Match: A0A067LEK3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17270 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 3.8e-60
Identity = 112/132 (84.85%), Postives = 123/132 (93.18%), Query Frame = 3 

Query: 159 SIKQEFIKMEPEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYNNY 218
           S+ QE  KMEPEVI+AELVLP HL+FKRIQMYEKYPKGQ+RGRHWKHLKQILQAEN+ NY
Sbjct: 101 SVNQE--KMEPEVIKAELVLPTHLSFKRIQMYEKYPKGQARGRHWKHLKQILQAENFQNY 160

Query: 219 SPDEPNYVNIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQR 278
            PDEPNYVNIESPPSMHPCKRICDITGYEAPY DPRT L YA+AD+FK++RSLPNEYVQR
Sbjct: 161 PPDEPNYVNIESPPSMHPCKRICDITGYEAPYLDPRTKLSYASADVFKLVRSLPNEYVQR 220

Query: 279 YLAMRNAAVVLR 338
           YLA+RNAAVVL+
Sbjct: 221 YLALRNAAVVLK 230

Query: 339  398
           
Sbjct: 281  230

Query: 399  458
           
Sbjct: 341  230

Query: 459  518
           
Sbjct: 401  230

Query: 519  555
           
Sbjct: 461  230

[Close]
BLAST of MU50354 vs. TrEMBL
Match: A0A151QTB1_CAJCA (INO80 complex subunit C OS=Cajanus cajan GN=KK1_045583 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 6.6e-60
Identity = 107/124 (86.29%), Postives = 119/124 (95.97%), Query Frame = 3 

Query: 183 MEPEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYNNYSPDEPNYV 242
           ME EV+EAELVLP +L+FKR+QMYEKYPKGQ+RGRHWKHLKQI+QAENY NY PDEPNYV
Sbjct: 1   MEAEVVEAELVLPSYLSFKRVQMYEKYPKGQARGRHWKHLKQIIQAENYQNYPPDEPNYV 60

Query: 243 NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 302
           NIESPPSMHPCKRICDITG+EAPYYDPRT LRYANAD+FK+IRSLPNEYVQRYLA+RNAA
Sbjct: 61  NIESPPSMHPCKRICDITGFEAPYYDPRTNLRYANADVFKIIRSLPNEYVQRYLALRNAA 120

Query: 303 VVLR 362
           +VL+
Sbjct: 121 IVLK 124

Query: 363  422
           
Sbjct: 181  124

Query: 423  482
           
Sbjct: 241  124

Query: 483  542
           
Sbjct: 301  124

Query: 543  555
           
Sbjct: 361  124

[Close]
BLAST of MU50354 vs. TrEMBL
Match: V4SAC9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029589mg PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 6.6e-60
Identity = 109/124 (87.90%), Postives = 119/124 (95.97%), Query Frame = 3 

Query: 183 MEPEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYNNYSPDEPNYV 242
           ME EVIEAELVLP +++FKRIQMYEKYPKGQSRGRHWKHLKQILQAENY NY PDEPNYV
Sbjct: 1   MEAEVIEAELVLPTYMSFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYQNYPPDEPNYV 60

Query: 243 NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 302
           NIESPPSMHPCKRICDITG+EAPYYDPRT LRYANA++FK++RSLPNEYVQRYLA+RNAA
Sbjct: 61  NIESPPSMHPCKRICDITGFEAPYYDPRTNLRYANAEVFKLVRSLPNEYVQRYLALRNAA 120

Query: 303 VVLR 362
           VVL+
Sbjct: 121 VVLK 124

Query: 363  422
           
Sbjct: 181  124

Query: 423  482
           
Sbjct: 241  124

Query: 483  542
           
Sbjct: 301  124

Query: 543  555
           
Sbjct: 361  124

[Close]
BLAST of MU50354 vs. TAIR10
Match: AT4G38495.1 (AT4G38495.1 YL1 nuclear, C-terminal (InterPro:IPR013272))

HSP 1 Score: 176.0 bits (445), Expect = 3.4e-44
Identity = 81/124 (65.32%), Postives = 98/124 (79.03%), Query Frame = 3 

Query: 183 MEPEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYNNYSPDEPNYV 242
           ME E++EA++V+   L+FK+ Q YEKYPK QS  R WKHLKQILQAEN+ +  PD P YV
Sbjct: 1   MERELMEADIVVASRLSFKKKQAYEKYPKAQSSSRRWKHLKQILQAENFPDLPPDLPTYV 60

Query: 243 NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 302
           NIESPPS  PCKR+CDITGYEAPY DPRT LRYANA +F+ +RSL ++ V +YL++RNAA
Sbjct: 61  NIESPPSTQPCKRLCDITGYEAPYVDPRTNLRYANAHVFQTVRSLSSDQVHQYLSIRNAA 120

Query: 303 VVLR 362
           VVL+
Sbjct: 121 VVLK 124

Query: 363  422
           
Sbjct: 181  124

Query: 423  482
           
Sbjct: 241  124

Query: 483  542
           
Sbjct: 301  124

Query: 543  555
           
Sbjct: 361  124

[Close]
BLAST of MU50354 vs. NCBI nr
Match: gi|659082319|ref|XP_008441777.1| (PREDICTED: INO80 complex subunit C isoform X1 [Cucumis melo])

HSP 1 Score: 261.5 bits (667), Expect = 1.8e-66
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 3 

Query: 183 MEPEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYNNYSPDEPNYV 242
           MEPEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYNNYSPDEPNYV
Sbjct: 1   MEPEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYNNYSPDEPNYV 60

Query: 243 NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 302
           NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA
Sbjct: 61  NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 120

Query: 303 VVLR 362
           VVLR
Sbjct: 121 VVLR 124

Query: 363  422
           
Sbjct: 181  124

Query: 423  482
           
Sbjct: 241  124

Query: 483  542
           
Sbjct: 301  124

Query: 543  555
           
Sbjct: 361  124

[Close]
BLAST of MU50354 vs. NCBI nr
Match: gi|449470210|ref|XP_004152811.1| (PREDICTED: INO80 complex subunit C isoform X1 [Cucumis sativus])

HSP 1 Score: 256.5 bits (654), Expect = 5.7e-65
Identity = 122/124 (98.39%), Postives = 123/124 (99.19%), Query Frame = 3 

Query: 183 MEPEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYNNYSPDEPNYV 242
           ME EVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENY+NYSPDEPNYV
Sbjct: 1   MESEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYV 60

Query: 243 NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 302
           NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA
Sbjct: 61  NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 120

Query: 303 VVLR 362
           VVLR
Sbjct: 121 VVLR 124

Query: 363  422
           
Sbjct: 181  124

Query: 423  482
           
Sbjct: 241  124

Query: 483  542
           
Sbjct: 301  124

Query: 543  555
           
Sbjct: 361  124

[Close]
BLAST of MU50354 vs. NCBI nr
Match: gi|595810975|ref|XP_007203162.1| (hypothetical protein PRUPE_ppa024988mg, partial [Prunus persica])

HSP 1 Score: 245.7 bits (626), Expect = 1.0e-61
Identity = 122/176 (69.32%), Postives = 143/176 (81.25%), Query Frame = 3 

Query: 45  DWSIESVILQAAAMD*SLGFLFNL*ISK----VFQKSEDI*FSIKQEFIK--MEPEVIEA 104
           DW +E   + AAA   ++    +L + +    +  +S+ +  S +++F    MEPEV+ A
Sbjct: 69  DWRLERREVSAAAATVAVDVSGHLALVQKWVLILNQSKFVAASHRRDFTSTNMEPEVVHA 128

Query: 105 ELVLPIHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYNNYSPDEPNYVNIESPPSM 164
           ELVLP HL+FKRIQMYEKYPKGQSRGRHWKHLKQI+QAENY NY P+EPNYVNIESPPSM
Sbjct: 129 ELVLPTHLSFKRIQMYEKYPKGQSRGRHWKHLKQIIQAENYQNYPPNEPNYVNIESPPSM 188

Query: 165 HPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAAVVLR 224
           HPCKRICDITGYEAPYYDPRT LRYANADIFK+IRSLPNEYVQRYLA+RNAAVVL+
Sbjct: 189 HPCKRICDITGYEAPYYDPRTGLRYANADIFKLIRSLPNEYVQRYLALRNAAVVLK 244

Query: 225  284
           
Sbjct: 249  244

Query: 285  344
           
Sbjct: 309  244

Query: 345  404
           
Sbjct: 369  244

Query: 405  464
           
Sbjct: 429  244

Query: 465  524
           
Sbjct: 489  244

Query: 525  555
           
Sbjct: 549  244

[Close]
BLAST of MU50354 vs. NCBI nr
Match: gi|694380660|ref|XP_009366445.1| (PREDICTED: chromatin-remodeling complex subunit ies6 [Pyrus x bretschneideri])

HSP 1 Score: 243.0 bits (619), Expect = 6.5e-61
Identity = 111/124 (89.52%), Postives = 119/124 (95.97%), Query Frame = 3 

Query: 183 MEPEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYNNYSPDEPNYV 242
           MEPEV++AELVLP HL+FKRIQMYEKYPKGQSRGRHWKHLKQI+QAENY NY PDEPNYV
Sbjct: 1   MEPEVVDAELVLPTHLSFKRIQMYEKYPKGQSRGRHWKHLKQIIQAENYQNYPPDEPNYV 60

Query: 243 NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 302
           NIESPPSMHPCK+ICDITGYEAPYYDPRT LRYAN DIFK+IRSLPNEYVQRYLA+RNAA
Sbjct: 61  NIESPPSMHPCKKICDITGYEAPYYDPRTNLRYANTDIFKLIRSLPNEYVQRYLALRNAA 120

Query: 303 VVLR 362
           VVL+
Sbjct: 121 VVLK 124

Query: 363  422
           
Sbjct: 181  124

Query: 423  482
           
Sbjct: 241  124

Query: 483  542
           
Sbjct: 301  124

Query: 543  555
           
Sbjct: 361  124

[Close]
BLAST of MU50354 vs. NCBI nr
Match: gi|645270470|ref|XP_008240470.1| (PREDICTED: chromatin-remodeling complex subunit ies6 [Prunus mume])

HSP 1 Score: 242.3 bits (617), Expect = 1.1e-60
Identity = 112/124 (90.32%), Postives = 119/124 (95.97%), Query Frame = 3 

Query: 183 MEPEVIEAELVLPIHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYNNYSPDEPNYV 242
           MEPEV+ AELVLP HL+FKRIQMYEKYPKGQSRGRHWKHLKQI+QAENY NY P+EPNYV
Sbjct: 1   MEPEVVHAELVLPTHLSFKRIQMYEKYPKGQSRGRHWKHLKQIIQAENYQNYPPNEPNYV 60

Query: 243 NIESPPSMHPCKRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQRYLAMRNAA 302
           NIESPPSMHPCKRICDITGYEAPYYDPRT LRYANADIFK+IRSLPNEYVQRYLA+RNAA
Sbjct: 61  NIESPPSMHPCKRICDITGYEAPYYDPRTGLRYANADIFKLIRSLPNEYVQRYLALRNAA 120

Query: 303 VVLR 362
           VVL+
Sbjct: 121 VVLK 124

Query: 363  422
           
Sbjct: 181  124

Query: 423  482
           
Sbjct: 241  124

Query: 483  542
           
Sbjct: 301  124

Query: 543  555
           
Sbjct: 361  124

The following BLAST results are available for this feature:
BLAST of MU50354 vs. Swiss-Prot
Match NameE-valueIdentityDescription
IN80C_MOUSE5.4e-1542.86INO80 complex subunit C OS=Mus musculus GN=Ino80c PE=1 SV=1[more]
IN80C_HUMAN2.1e-1440.66INO80 complex subunit C OS=Homo sapiens GN=INO80C PE=1 SV=1[more]
IN80C_RAT2.1e-1440.66INO80 complex subunit C OS=Rattus norvegicus GN=Ino80c PE=2 SV=1[more]
IES6_SCHPO2.3e-1341.24Chromatin-remodeling complex subunit ies6 OS=Schizosaccharomyces pombe (strain 9... [more]
IES6_YEAST3.2e-0737.31Chromatin-remodeling complex subunit IES6 OS=Saccharomyces cerevisiae (strain AT... [more]
BLAST of MU50354 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJN6_CUCSA1.8e-6598.39Uncharacterized protein OS=Cucumis sativus GN=Csa_2G077540 PE=4 SV=1[more]
M5VTH2_PRUPE7.0e-6269.32Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa024988mg PE=4 S... [more]
A0A067LEK3_JATCU3.8e-6084.85Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17270 PE=4 SV=1[more]
A0A151QTB1_CAJCA6.6e-6086.29INO80 complex subunit C OS=Cajanus cajan GN=KK1_045583 PE=4 SV=1[more]
V4SAC9_9ROSI6.6e-6087.90Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029589mg PE=4 SV=1[more]
BLAST of MU50354 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G38495.13.4e-4465.32 YL1 nuclear, C-terminal (InterPro:IPR013272)[more]
BLAST of MU50354 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659082319|ref|XP_008441777.1|1.8e-66100.00PREDICTED: INO80 complex subunit C isoform X1 [Cucumis melo][more]
gi|449470210|ref|XP_004152811.1|5.7e-6598.39PREDICTED: INO80 complex subunit C isoform X1 [Cucumis sativus][more]
gi|595810975|ref|XP_007203162.1|1.0e-6169.32hypothetical protein PRUPE_ppa024988mg, partial [Prunus persica][more]
gi|694380660|ref|XP_009366445.1|6.5e-6189.52PREDICTED: chromatin-remodeling complex subunit ies6 [Pyrus x bretschneideri][more]
gi|645270470|ref|XP_008240470.1|1.1e-6090.32PREDICTED: chromatin-remodeling complex subunit ies6 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR013272Vps72/YL1_C
Vocabulary: Biological Process
TermDefinition
GO:0006338chromatin remodeling
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0031011Ino80 complex
GO Annotation
GO Assignments
This transcribed_cluster is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006338 chromatin remodeling
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0031011 Ino80 complex
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C008634MELO3C008634gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
15D24C0815D24C08EST
AI14C09AI14C09EST
GA16YP20FM1GA16YP20FM1EST
TEa0007A15TEa0007A15EST


InterPro
Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013272Vps72/YL1, C-terminalPFAMPF08265YL1_Ccoord: 74..102
score: 2.9
IPR013272Vps72/YL1, C-terminalSMARTSM00993YL1_C_2coord: 73..102
score: 2.1
NoneNo IPR availablePANTHERPTHR31200FAMILY NOT NAMEDcoord: 1..124
score: 5.6