MU46910 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU46910
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Unknown protein
Location	chr4 : 943021 .. 943641 (-)
Sequence length	623

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

ACACTATTTAACGCTAAAACAATACTATATATCTTTACCTGTTCTAACAAAACCCCAAATGGGTTGTTTGGTTCTTCCTTGCTACGTCATGAAGAGACGACGCCGGAGATCAACCCGACCGCACCTCGGCTACCACCGTCTCCACAAATCCAACTTCGGCCGCAACGATAGCAGCGATGCGGAGAGTAGTCTAGTGAAGGTTGTGGCGGGAAAAGAGAGAAGAGAATTCTTAGTAGACCCTTTTGTGTTGGAAGAAAATCCGTTTCGGACTTTGATCGAAAAGGGAGGAGATTCAGATGACGATGAAGATGGAGATGGAGATCATGGAAAAAAGAAAAGGGTTATATTTGTTGATGTTGATGCTATTTTGTTTGAGCATTTGCTATGGCTAATGTATAACGATTGTTCTTCTTTGTTTAAGCTAAATGTAGAGGAAATTCTTGACTTTTATGCTCAAGATTTTTAGAGGGGATCAGAGAGAGAGATATATAGAATTCAGAGAAACATAATTAAAGGTATAATTCAGTCAACATATATATATACACACACACACACACACATATGTATTTGCAATAATTGTTAAAGTTTATATAAAAGGTGTTCCTGTGATGGCATCGTTTCAG

Library


Library category	ESTs
melon AI library	2
melon DFLP2 library	1
melon VFLP2 library	1
melon HS library	1

Homology

[Close]

BLAST of MU46910 vs. TrEMBL
Match: A0A0A0LK59_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G902380 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.2e-49
Identity = 109/138 (78.99%), Postives = 112/138 (81.16%), Query Frame = 2


Query: 59  MGCLVLPCYVMKRRRRR-STRPHLGYHRLHKSNFGRND--SSDAESSLVKVVAGKERREF 118
           MGCLVLPCYVMKRRRRR ST+PHLGYHRL+KSNFGRN+     AESSLVKVVAGKERREF
Sbjct: 1   MGCLVLPCYVMKRRRRRRSTQPHLGYHRLNKSNFGRNEYIGDHAESSLVKVVAGKERREF 60

Query: 119 LVDPFVLEENPFRTLIEXXXXXXXXXXXXXXXXXXXRVIFVDVDAILFEHLLWLMYNDCS 178
           LVDPFVLEENPFR LIE                   RVIFVDVDAILFEHLLWLMYNDCS
Sbjct: 61  LVDPFVLEENPFRILIE---KGGDDDEDEDGDGKRKRVIFVDVDAILFEHLLWLMYNDCS 120

Query: 179 SLFKLNVEEILDFYAQDF 238
           SLFKLNVEEILDFYAQDF
Sbjct: 121 SLFKLNVEEILDFYAQDF 135

Query: 239  298
           
Sbjct: 181  135

Query: 299  358
           
Sbjct: 241  135

Query: 359  418
           
Sbjct: 301  135

Query: 419  464
           
Sbjct: 361  135

[Close]

BLAST of MU46910 vs. TrEMBL
Match: B9S1G2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0864910 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.8e-29
Identity = 76/135 (56.30%), Postives = 89/135 (65.93%), Query Frame = 2


Query: 59  MGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRNDSSDAESSLVKVVAGKERREFLVD 118
           M CLVLP  ++++R    +R  LGY  L +  FG  D        VKVV GKE+REFLVD
Sbjct: 1   MDCLVLPVSILRKRYTAGSR--LGYRPLTEDGFGGLDRP------VKVVVGKEKREFLVD 60

Query: 119 PFVLEENPFRTLIEXXXXXXXXXXXXXXXXXXXRVIFVDVDAILFEHLLWLMYNDCSSLF 178
           PFVLEE+PFR LIE                   R IFVDVDAILFEH+LWLMYNDCSSLF
Sbjct: 61  PFVLEESPFRVLIETVKKGSYDHNFDDMKKR--RTIFVDVDAILFEHMLWLMYNDCSSLF 120

Query: 179 KLNVEEILDFYAQDF 238
           +LN+EEI+DFYAQD+
Sbjct: 121 QLNLEEIIDFYAQDY 125

Query: 239  298
           
Sbjct: 181  125

Query: 299  358
           
Sbjct: 241  125

Query: 359  418
           
Sbjct: 301  125

Query: 419  464
           
Sbjct: 361  125

[Close]

BLAST of MU46910 vs. TrEMBL
Match: M5W8K6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025934mg PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.1e-29
Identity = 75/134 (55.97%), Postives = 87/134 (64.93%), Query Frame = 2


Query: 59  MGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRNDSSDAESSLVKVVAGKERREFLVD 118
           M CLVLP  ++K+R   S     GY  L +  FG  ++       V VV GKERREFLVD
Sbjct: 1   MACLVLPIAMLKKRCMGSRIG--GYRHLTEEGFGGLENP------VTVVVGKERREFLVD 60

Query: 119 PFVLEENPFRTLIEXXXXXXXXXXXXXXXXXXXRVIFVDVDAILFEHLLWLMYNDCSSLF 178
           PFVLEENPFR LIE                   R++FVDVDAILFEH+LWLMYNDCSSLF
Sbjct: 61  PFVLEENPFRVLIEMMNKDKKMVDFIDHENGKGRMVFVDVDAILFEHMLWLMYNDCSSLF 120

Query: 179 KLNVEEILDFYAQD 238
           KLN++EI+DFYAQD
Sbjct: 121 KLNLKEIIDFYAQD 126

Query: 239  298
           
Sbjct: 181  126

Query: 299  358
           
Sbjct: 241  126

Query: 359  418
           
Sbjct: 301  126

Query: 419  461
           
Sbjct: 361  126

[Close]

BLAST of MU46910 vs. TrEMBL
Match: B9N2N3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s09020g PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.5e-28
Identity = 76/134 (56.72%), Postives = 88/134 (65.67%), Query Frame = 2


Query: 59  MGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRNDSSDAESSLVKVVAGKERREFLVD 118
           M CLVLP  ++++   RS    LGY  L +  FG  DS       V VV GKER+EFLVD
Sbjct: 1   MDCLVLPVSMLRKCYSRS---RLGYRPLTEDGFGDLDSP------VTVVVGKERKEFLVD 60

Query: 119 PFVLEENPFRTLIEXXXXXXXXXXXXXXXXXXXRVIFVDVDAILFEHLLWLMYNDCSSLF 178
           PFVLEE+PFR LIE                   RVIFVDVDAILFEH+LWLMYNDCSSLF
Sbjct: 61  PFVLEESPFRVLIE-TVNKDRVFDDTSRSREEKRVIFVDVDAILFEHMLWLMYNDCSSLF 120

Query: 179 KLNVEEILDFYAQD 238
           +LN++EI+DFYAQD
Sbjct: 121 QLNLKEIIDFYAQD 124

Query: 239  298
           
Sbjct: 181  124

Query: 299  358
           
Sbjct: 241  124

Query: 359  418
           
Sbjct: 301  124

Query: 419  461
           
Sbjct: 361  124

[Close]

BLAST of MU46910 vs. TrEMBL
Match: V4SQ79_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033079mg PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 8.6e-27
Identity = 72/135 (53.33%), Postives = 86/135 (63.70%), Query Frame = 2


Query: 59  MGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRNDSSDAESSLVKVVAGKERREFLVD 118
           M CL+LP  ++ RRR  +TR  LGY  L      R    +     V VV GKE+REFLVD
Sbjct: 1   MDCLILPVSIL-RRRNTNTRSRLGYQHL------RVTEEERLGDPVTVVVGKEKREFLVD 60

Query: 119 PFVLEENPFRTLIEXXXXXXXXXXXXXXXXXXXRVIFVDVDAILFEHLLWLMYNDCSSLF 178
           PFVL+ENPFR LI+                   RVIFVDVD+ILFEH+LWLM+ND SSLF
Sbjct: 61  PFVLDENPFRILID---SSSVVKKNAHKMMRDKRVIFVDVDSILFEHMLWLMHNDSSSLF 120

Query: 179 KLNVEEILDFYAQDF 238
           +LNV EI+DFYAQD+
Sbjct: 121 QLNVSEIIDFYAQDY 125

Query: 239  298
           
Sbjct: 181  125

Query: 299  358
           
Sbjct: 241  125

Query: 359  418
           
Sbjct: 301  125

Query: 419  464
           
Sbjct: 361  125

[Close]

BLAST of MU46910 vs. TAIR10
Match: AT2G35290.1 (AT2G35290.1 unknown protein)

HSP 1 Score: 93.6 bits (231), Expect = 1.5e-19
Identity = 58/135 (42.96%), Postives = 77/135 (57.04%), Query Frame = 2


Query: 59  MGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRNDSSDAESSLVKVVAGKERREFLVD 118
           MGCL+ P  VMK RR  S       +R        N + + E  +++VV GKE++EF+V+
Sbjct: 1   MGCLISP--VMKLRRLSSADSRRFAYR--------NLAENMEDPVIRVVVGKEKKEFMVE 60

Query: 119 PFVLEENPFRTLIEXXXXXXXXXXXXXXXXXXXRVIFVD-VDAILFEHLLWLMYNDCSSL 178
           P+VLEE PFR LI                    RV+++D VD+ILFEHLLWL+ ND S+ 
Sbjct: 61  PYVLEEYPFRVLI-----GSAKDRAKNRLNRTGRVVWLDHVDSILFEHLLWLLRNDASTF 120

Query: 179 FKLNVEEILDFYAQD 238
             L+V EI++FYAQD
Sbjct: 121 SDLDVLEIIEFYAQD 120

Query: 239  298
           
Sbjct: 181  120

Query: 299  358
           
Sbjct: 241  120

Query: 359  418
           
Sbjct: 301  120

Query: 419  461
           
Sbjct: 361  120

[Close]

BLAST of MU46910 vs. NCBI nr
Match: gi|659132004|ref|XP_008465964.1| (PREDICTED: uncharacterized protein LOC103503536 [Cucumis melo])

HSP 1 Score: 266.9 bits (681), Expect = 2.9e-68
Identity = 135/154 (87.66%), Postives = 135/154 (87.66%), Query Frame = 2


Query: 2   HYLTLKQYYISLPVLTKPQMGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRNDSSDA 61
           HYLTLKQYYISLPVLTKPQMGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRNDSSDA
Sbjct: 6   HYLTLKQYYISLPVLTKPQMGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRNDSSDA 65

Query: 62  ESSLVKVVAGKERREFLVDPFVLEENPFRTLIEXXXXXXXXXXXXXXXXXXXRVIFVDVD 121
           ESSLVKVVAGKERREFLVDPFVLEENPFRTLIE                   RVIFVDVD
Sbjct: 66  ESSLVKVVAGKERREFLVDPFVLEENPFRTLIEKGGDSDDDEDGDGDHGKKKRVIFVDVD 125

Query: 122 AILFEHLLWLMYNDCSSLFKLNVEEILDFYAQDF 181
           AILFEHLLWLMYNDCSSLFKLNVEEILDFYAQDF
Sbjct: 126 AILFEHLLWLMYNDCSSLFKLNVEEILDFYAQDF 159

Query: 182  241
           
Sbjct: 186  159

Query: 242  301
           
Sbjct: 246  159

Query: 302  361
           
Sbjct: 306  159

Query: 362  421
           
Sbjct: 366  159

Query: 422  464
           
Sbjct: 426  159

[Close]

BLAST of MU46910 vs. NCBI nr
Match: gi|778687951|ref|XP_011652654.1| (PREDICTED: uncharacterized protein LOC105435042 [Cucumis sativus])

HSP 1 Score: 201.4 bits (511), Expect = 1.5e-48
Identity = 109/138 (78.99%), Postives = 112/138 (81.16%), Query Frame = 2


Query: 59  MGCLVLPCYVMKRRRRR-STRPHLGYHRLHKSNFGRND--SSDAESSLVKVVAGKERREF 118
           MGCLVLPCYVMKRRRRR ST+PHLGYHRL+KSNFGRN+     AESSLVKVVAGKERREF
Sbjct: 1   MGCLVLPCYVMKRRRRRRSTQPHLGYHRLNKSNFGRNEYIGDHAESSLVKVVAGKERREF 60

Query: 119 LVDPFVLEENPFRTLIEXXXXXXXXXXXXXXXXXXXRVIFVDVDAILFEHLLWLMYNDCS 178
           LVDPFVLEENPFR LIE                   RVIFVDVDAILFEHLLWLMYNDCS
Sbjct: 61  LVDPFVLEENPFRILIEKGGDDDEDEDGDGKRK---RVIFVDVDAILFEHLLWLMYNDCS 120

Query: 179 SLFKLNVEEILDFYAQDF 238
           SLFKLNVEEILDFYAQDF
Sbjct: 121 SLFKLNVEEILDFYAQDF 135

Query: 239  298
           
Sbjct: 181  135

Query: 299  358
           
Sbjct: 241  135

Query: 359  418
           
Sbjct: 301  135

Query: 419  464
           
Sbjct: 361  135

[Close]

BLAST of MU46910 vs. NCBI nr
Match: gi|255557595|ref|XP_002519827.1| (PREDICTED: uncharacterized protein LOC8284609 [Ricinus communis])

HSP 1 Score: 134.4 bits (337), Expect = 2.2e-28
Identity = 76/135 (56.30%), Postives = 89/135 (65.93%), Query Frame = 2


Query: 59  MGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRNDSSDAESSLVKVVAGKERREFLVD 118
           M CLVLP  ++++R    +R  LGY  L +  FG  D        VKVV GKE+REFLVD
Sbjct: 1   MDCLVLPVSILRKRYTAGSR--LGYRPLTEDGFGGLDRP------VKVVVGKEKREFLVD 60

Query: 119 PFVLEENPFRTLIEXXXXXXXXXXXXXXXXXXXRVIFVDVDAILFEHLLWLMYNDCSSLF 178
           PFVLEE+PFR LIE                   R IFVDVDAILFEH+LWLMYNDCSSLF
Sbjct: 61  PFVLEESPFRVLIETVKKGSYDHNFDDMKKR--RTIFVDVDAILFEHMLWLMYNDCSSLF 120

Query: 179 KLNVEEILDFYAQDF 238
           +LN+EEI+DFYAQD+
Sbjct: 121 QLNLEEIIDFYAQDY 125

Query: 239  298
           
Sbjct: 181  125

Query: 299  358
           
Sbjct: 241  125

Query: 359  418
           
Sbjct: 301  125

Query: 419  464
           
Sbjct: 361  125

[Close]

BLAST of MU46910 vs. NCBI nr
Match: gi|595845108|ref|XP_007208868.1| (hypothetical protein PRUPE_ppa025934mg [Prunus persica])

HSP 1 Score: 133.7 bits (335), Expect = 3.8e-28
Identity = 75/134 (55.97%), Postives = 87/134 (64.93%), Query Frame = 2


Query: 59  MGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRNDSSDAESSLVKVVAGKERREFLVD 118
           M CLVLP  ++K+R   S     GY  L +  FG  ++       V VV GKERREFLVD
Sbjct: 1   MACLVLPIAMLKKRCMGSRIG--GYRHLTEEGFGGLENP------VTVVVGKERREFLVD 60

Query: 119 PFVLEENPFRTLIEXXXXXXXXXXXXXXXXXXXRVIFVDVDAILFEHLLWLMYNDCSSLF 178
           PFVLEENPFR LIE                   R++FVDVDAILFEH+LWLMYNDCSSLF
Sbjct: 61  PFVLEENPFRVLIEMMNKDKKMVDFIDHENGKGRMVFVDVDAILFEHMLWLMYNDCSSLF 120

Query: 179 KLNVEEILDFYAQD 238
           KLN++EI+DFYAQD
Sbjct: 121 KLNLKEIIDFYAQD 126

Query: 239  298
           
Sbjct: 181  126

Query: 299  358
           
Sbjct: 241  126

Query: 359  418
           
Sbjct: 301  126

Query: 419  461
           
Sbjct: 361  126

[Close]

BLAST of MU46910 vs. NCBI nr
Match: gi|743848250|ref|XP_011028185.1| (PREDICTED: uncharacterized protein LOC105128288 [Populus euphratica])

HSP 1 Score: 132.1 bits (331), Expect = 1.1e-27
Identity = 77/134 (57.46%), Postives = 88/134 (65.67%), Query Frame = 2


Query: 59  MGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRNDSSDAESSLVKVVAGKERREFLVD 118
           M CLVLP  ++   R+  TR  LGY  L +  FG  DS       V VV GKER+EFLVD
Sbjct: 1   MDCLVLPVSML---RKCYTRSRLGYRPLTEDGFGDLDSP------VTVVVGKERKEFLVD 60

Query: 119 PFVLEENPFRTLIEXXXXXXXXXXXXXXXXXXXRVIFVDVDAILFEHLLWLMYNDCSSLF 178
           PFVLEE+PFR LIE                   RVIFVDVDAILFEH+LWLMYNDCSSLF
Sbjct: 61  PFVLEESPFRVLIETVKKDRVFDDTSRSREEK-RVIFVDVDAILFEHMLWLMYNDCSSLF 120

Query: 179 KLNVEEILDFYAQD 238
           +LN++EI+DFYAQD
Sbjct: 121 QLNLKEIIDFYAQD 124

Query: 239  298
           
Sbjct: 181  124

Query: 299  358
           
Sbjct: 241  124

Query: 359  418
           
Sbjct: 301  124

Query: 419  461
           
Sbjct: 361  124

The following BLAST results are available for this feature:

BLAST of MU46910 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LK59_CUCSA	1.2e-49	78.99	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G902380 PE=4 SV=1	[more]
B9S1G2_RICCO	1.8e-29	56.30	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0864910 PE=4 SV=1	[more]
M5W8K6_PRUPE	3.1e-29	55.97	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025934mg PE=4 SV=1	[more]
B9N2N3_POPTR	3.5e-28	56.72	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s09020g PE=4 SV=1	[more]
V4SQ79_9ROSI	8.6e-27	53.33	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033079mg PE=4 SV=1	[more]

BLAST of MU46910 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G35290.1	1.5e-19	42.96	unknown protein	[more]

BLAST of MU46910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659132004\|ref\|XP_008465964.1\|	2.9e-68	87.66	PREDICTED: uncharacterized protein LOC103503536 [Cucumis melo]	[more]
gi\|778687951\|ref\|XP_011652654.1\|	1.5e-48	78.99	PREDICTED: uncharacterized protein LOC105435042 [Cucumis sativus]	[more]
gi\|255557595\|ref\|XP_002519827.1\|	2.2e-28	56.30	PREDICTED: uncharacterized protein LOC8284609 [Ricinus communis]	[more]
gi\|595845108\|ref\|XP_007208868.1\|	3.8e-28	55.97	hypothetical protein PRUPE_ppa025934mg [Prunus persica]	[more]
gi\|743848250\|ref\|XP_011028185.1\|	1.1e-27	57.46	PREDICTED: uncharacterized protein LOC105128288 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR003676	SAUR_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0009733	response to auxin

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C003403	MELO3C003403	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
AI05C07	AI05C07	EST
AI34G01	AI34G01	EST
EA10YJ18FM1	EA10YJ18FM1	EST
GA51YC18FM1	GA51YC18FM1	EST
HS32G05	HS32G05	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 10..102 score: 1.
None	No IPR available	PANTHER	PTHR35296	FAMILY NOT NAMED	coord: 4..125 score: 1.1