MELO3C003403 (gene) Melon (DHL92) v3.5.1

NameMELO3C003403
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionSAUR-like auxin-responsive family protein
Locationchr4 : 942836 .. 943791 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACACTTCAACAAATACAACCCCCTTTCTAAATATATTACCTTCTTTTTCATCTTTCTATCTGCTTAAAAGACTCTTTCAATGAGACCCTTTCAACACATCCATCTGTCTTTTCTTCCATCTATATATACTTAGATCTATGGTTTTTCCTCTACACTATTTAACGCTAAAACAATACTATATATCTTTACCTGTTCTAACAAAACCCCAAATGGGTTGTTTGGTTCTTCCTTGCTACGTCATGAAGAGACGACGCCGGAGATCAACCCGACCGCACCTCGGCTACCACCGTCTCCACAAATCCAACTTCGGCCGCAACGATAGCAGCGATGCGGAGAGTAGTCTAGTGAAGGTTGTGGCGGGAAAAGAGAGAAGAGAATTCTTAGTAGACCCTTTTGTGTTGGAAGAAAATCCGTTTCGGACTTTGATCGAAAAGGGAGGAGATTCAGATGACGATGAAGATGGAGATGGAGATCATGGAAAAAAGAAAAGGGTTATATTTGTTGATGTTGATGCTATTTTGTTTGAGCATTTGCTATGGCTAATGTATAACGATTGTTCTTCTTTGTTTAAGCTAAATGTAGAGGAAATTCTTGACTTTTATGCTCAAGATTTTTAGAGGGGATCAGAGAGAGAGATATATAGAATTCAGAGAAACATAATTAAAGGTATAATTCAGTCAACATATATATATACACACACACACACACATATGTATTTGCAATAATTGTTAAAGTTTATATAAAGGGTGTTCCTGTGATGGCATCGTTTCACCAAAGGCTAGTAATTGAGTTGAGCTCAATTGATCAGAACCTTATTACAACGTCGACAACTTCAACATCAACACCTATATATGCTTAGTACATCTCCAGCATTTCACATGTCCCAAGTTAATGTTAGTACCATTCGACTATCTCAAAAGGGCCGAGCAATATCATTTGTGGACAATATTGCTTCA

mRNA sequence

ACACTTCAACAAATACAACCCCCTTTCTAAATATATTACCTTCTTTTTCATCTTTCTATCTGCTTAAAAGACTCTTTCAATGAGACCCTTTCAACACATCCATCTGTCTTTTCTTCCATCTATATATACTTAGATCTATGGTTTTTCCTCTACACTATTTAACGCTAAAACAATACTATATATCTTTACCTGTTCTAACAAAACCCCAAATGGGTTGTTTGGTTCTTCCTTGCTACGTCATGAAGAGACGACGCCGGAGATCAACCCGACCGCACCTCGGCTACCACCGTCTCCACAAATCCAACTTCGGCCGCAACGATAGCAGCGATGCGGAGAGTAGTCTAGTGAAGGTTGTGGCGGGAAAAGAGAGAAGAGAATTCTTAGTAGACCCTTTTGTGTTGGAAGAAAATCCGTTTCGGACTTTGATCGAAAAGGGAGGAGATTCAGATGACGATGAAGATGGAGATGGAGATCATGGAAAAAAGAAAAGGGTTATATTTGTTGATGTTGATGCTATTTTGTTTGAGCATTTGCTATGGCTAATGTATAACGATTGTTCTTCTTTGTTTAAGCTAAATGTAGAGGAAATTCTTGACTTTTATGCTCAAGATTTTTAGAGGGGATCAGAGAGAGAGATATATAGAATTCAGAGAAACATAATTAAAGGTATAATTCAGTCAACATATATATATACACACACACACACACATATGTATTTGCAATAATTGTTAAAGTTTATATAAAGGGTGTTCCTGTGATGGCATCGTTTCACCAAAGGCTAGTAATTGAGTTGAGCTCAATTGATCAGAACCTTATTACAACGTCGACAACTTCAACATCAACACCTATATATGCTTAGTACATCTCCAGCATTTCACATGTCCCAAGTTAATGTTAGTACCATTCGACTATCTCAAAAGGGCCGAGCAATATCATTTGTGGACAATATTGCTTCA

Coding sequence (CDS)

ATGGTTTTTCCTCTACACTATTTAACGCTAAAACAATACTATATATCTTTACCTGTTCTAACAAAACCCCAAATGGGTTGTTTGGTTCTTCCTTGCTACGTCATGAAGAGACGACGCCGGAGATCAACCCGACCGCACCTCGGCTACCACCGTCTCCACAAATCCAACTTCGGCCGCAACGATAGCAGCGATGCGGAGAGTAGTCTAGTGAAGGTTGTGGCGGGAAAAGAGAGAAGAGAATTCTTAGTAGACCCTTTTGTGTTGGAAGAAAATCCGTTTCGGACTTTGATCGAAAAGGGAGGAGATTCAGATGACGATGAAGATGGAGATGGAGATCATGGAAAAAAGAAAAGGGTTATATTTGTTGATGTTGATGCTATTTTGTTTGAGCATTTGCTATGGCTAATGTATAACGATTGTTCTTCTTTGTTTAAGCTAAATGTAGAGGAAATTCTTGACTTTTATGCTCAAGATTTTTAG

Protein sequence

MVFPLHYLTLKQYYISLPVLTKPQMGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRNDSSDAESSLVKVVAGKERREFLVDPFVLEENPFRTLIEKGGDSDDDEDGDGDHGKKKRVIFVDVDAILFEHLLWLMYNDCSSLFKLNVEEILDFYAQDF*
BLAST of MELO3C003403 vs. TrEMBL
Match: A0A0A0LK59_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G902380 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.2e-60
Identity = 122/138 (88.41%), Postives = 127/138 (92.03%), Query Frame = 1

Query: 25  MGCLVLPCYVMKRRRRR-STRPHLGYHRLHKSNFGRND--SSDAESSLVKVVAGKERREF 84
           MGCLVLPCYVMKRRRRR ST+PHLGYHRL+KSNFGRN+     AESSLVKVVAGKERREF
Sbjct: 1   MGCLVLPCYVMKRRRRRRSTQPHLGYHRLNKSNFGRNEYIGDHAESSLVKVVAGKERREF 60

Query: 85  LVDPFVLEENPFRTLIEKGGDSDDDEDGDGDHGKKKRVIFVDVDAILFEHLLWLMYNDCS 144
           LVDPFVLEENPFR LIEKGGD D+DEDGDG   K+KRVIFVDVDAILFEHLLWLMYNDCS
Sbjct: 61  LVDPFVLEENPFRILIEKGGDDDEDEDGDG---KRKRVIFVDVDAILFEHLLWLMYNDCS 120

Query: 145 SLFKLNVEEILDFYAQDF 160
           SLFKLNVEEILDFYAQDF
Sbjct: 121 SLFKLNVEEILDFYAQDF 135

BLAST of MELO3C003403 vs. TrEMBL
Match: B9S1G2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0864910 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.4e-32
Identity = 82/137 (59.85%), Postives = 97/137 (70.80%), Query Frame = 1

Query: 25  MGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRNDSSDAESSLVKVVAGKERREFLVD 84
           M CLVLP  ++++R    +R  LGY  L +  FG  D        VKVV GKE+REFLVD
Sbjct: 1   MDCLVLPVSILRKRYTAGSR--LGYRPLTEDGFGGLDRP------VKVVVGKEKREFLVD 60

Query: 85  PFVLEENPFRTLIE--KGGDSDDDEDGDGDHGKKKRVIFVDVDAILFEHLLWLMYNDCSS 144
           PFVLEE+PFR LIE  K G  D + D      KK+R IFVDVDAILFEH+LWLMYNDCSS
Sbjct: 61  PFVLEESPFRVLIETVKKGSYDHNFDDM----KKRRTIFVDVDAILFEHMLWLMYNDCSS 120

Query: 145 LFKLNVEEILDFYAQDF 160
           LF+LN+EEI+DFYAQD+
Sbjct: 121 LFQLNLEEIIDFYAQDY 125

BLAST of MELO3C003403 vs. TrEMBL
Match: B9N2N3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s09020g PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.7e-30
Identity = 79/134 (58.96%), Postives = 94/134 (70.15%), Query Frame = 1

Query: 25  MGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRNDSSDAESSLVKVVAGKERREFLVD 84
           M CLVLP  ++++   RS    LGY  L +  FG  DS       V VV GKER+EFLVD
Sbjct: 1   MDCLVLPVSMLRKCYSRS---RLGYRPLTEDGFGDLDSP------VTVVVGKERKEFLVD 60

Query: 85  PFVLEENPFRTLIEKGGDSDDDEDGDGDHGKKKRVIFVDVDAILFEHLLWLMYNDCSSLF 144
           PFVLEE+PFR LIE   + D   D      ++KRVIFVDVDAILFEH+LWLMYNDCSSLF
Sbjct: 61  PFVLEESPFRVLIETV-NKDRVFDDTSRSREEKRVIFVDVDAILFEHMLWLMYNDCSSLF 120

Query: 145 KLNVEEILDFYAQD 159
           +LN++EI+DFYAQD
Sbjct: 121 QLNLKEIIDFYAQD 124

BLAST of MELO3C003403 vs. TrEMBL
Match: M5W8K6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025934mg PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.7e-30
Identity = 81/140 (57.86%), Postives = 94/140 (67.14%), Query Frame = 1

Query: 25  MGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRNDSSDAESSLVKVVAGKERREFLVD 84
           M CLVLP  ++K+R   S     GY  L +  FG  ++       V VV GKERREFLVD
Sbjct: 1   MACLVLPIAMLKKRCMGSRIG--GYRHLTEEGFGGLENP------VTVVVGKERREFLVD 60

Query: 85  PFVLEENPFRTLIE------KGGDSDDDEDGDGDHGKKKRVIFVDVDAILFEHLLWLMYN 144
           PFVLEENPFR LIE      K  D  D E+G G      R++FVDVDAILFEH+LWLMYN
Sbjct: 61  PFVLEENPFRVLIEMMNKDKKMVDFIDHENGKG------RMVFVDVDAILFEHMLWLMYN 120

Query: 145 DCSSLFKLNVEEILDFYAQD 159
           DCSSLFKLN++EI+DFYAQD
Sbjct: 121 DCSSLFKLNLKEIIDFYAQD 126

BLAST of MELO3C003403 vs. TrEMBL
Match: A0A0J8CHY6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g106110 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.7e-30
Identity = 77/142 (54.23%), Postives = 94/142 (66.20%), Query Frame = 1

Query: 25  MGCLVLPCYVMKRR-RRRSTRPHLGYHRLHKSNFGRNDSSDAESSLVKVVAGKERREFLV 84
           M CLVLP  V+ RR   + +   LGY  L       +D   A+  LV VV G+ER++FLV
Sbjct: 1   MECLVLPVSVLMRRCSSKYSSSRLGYRHL------ADDHMLADGELVTVVVGRERKQFLV 60

Query: 85  DPFVLEENPFRTLIE------KGGDSDDDEDGDGDHGKKKRVIFVDVDAILFEHLLWLMY 144
           DPFVL+E+PFR LIE      K    + +   DG     KRVIFVDVDAILFEH+LWLMY
Sbjct: 61  DPFVLQESPFRVLIEMAHYDDKNKKKNSENYMDGITSSTKRVIFVDVDAILFEHMLWLMY 120

Query: 145 NDCSSLFKLNVEEILDFYAQDF 160
           NDCSS FKLNV+EI++FYAQD+
Sbjct: 121 NDCSSFFKLNVKEIIEFYAQDY 136

BLAST of MELO3C003403 vs. TAIR10
Match: AT2G35290.1 (AT2G35290.1 unknown protein)

HSP 1 Score: 97.4 bits (241), Expect = 8.3e-21
Identity = 59/135 (43.70%), Postives = 80/135 (59.26%), Query Frame = 1

Query: 25  MGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRNDSSDAESSLVKVVAGKERREFLVD 84
           MGCL+ P  VMK RR  S       +R        N + + E  +++VV GKE++EF+V+
Sbjct: 1   MGCLISP--VMKLRRLSSADSRRFAYR--------NLAENMEDPVIRVVVGKEKKEFMVE 60

Query: 85  PFVLEENPFRTLIEKGGDSDDDEDGDGDHGKKKRVIFVD-VDAILFEHLLWLMYNDCSSL 144
           P+VLEE PFR LI    D   +        +  RV+++D VD+ILFEHLLWL+ ND S+ 
Sbjct: 61  PYVLEEYPFRVLIGSAKDRAKNR-----LNRTGRVVWLDHVDSILFEHLLWLLRNDASTF 120

Query: 145 FKLNVEEILDFYAQD 159
             L+V EI++FYAQD
Sbjct: 121 SDLDVLEIIEFYAQD 120

BLAST of MELO3C003403 vs. NCBI nr
Match: gi|659132004|ref|XP_008465964.1| (PREDICTED: uncharacterized protein LOC103503536 [Cucumis melo])

HSP 1 Score: 330.5 bits (846), Expect = 1.6e-87
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1

Query: 1   MVFPLHYLTLKQYYISLPVLTKPQMGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRN 60
           MVFPLHYLTLKQYYISLPVLTKPQMGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRN
Sbjct: 1   MVFPLHYLTLKQYYISLPVLTKPQMGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRN 60

Query: 61  DSSDAESSLVKVVAGKERREFLVDPFVLEENPFRTLIEKGGDSDDDEDGDGDHGKKKRVI 120
           DSSDAESSLVKVVAGKERREFLVDPFVLEENPFRTLIEKGGDSDDDEDGDGDHGKKKRVI
Sbjct: 61  DSSDAESSLVKVVAGKERREFLVDPFVLEENPFRTLIEKGGDSDDDEDGDGDHGKKKRVI 120

Query: 121 FVDVDAILFEHLLWLMYNDCSSLFKLNVEEILDFYAQDF 160
           FVDVDAILFEHLLWLMYNDCSSLFKLNVEEILDFYAQDF
Sbjct: 121 FVDVDAILFEHLLWLMYNDCSSLFKLNVEEILDFYAQDF 159

BLAST of MELO3C003403 vs. NCBI nr
Match: gi|778687951|ref|XP_011652654.1| (PREDICTED: uncharacterized protein LOC105435042 [Cucumis sativus])

HSP 1 Score: 240.7 bits (613), Expect = 1.7e-60
Identity = 122/138 (88.41%), Postives = 127/138 (92.03%), Query Frame = 1

Query: 25  MGCLVLPCYVMKRRRRR-STRPHLGYHRLHKSNFGRND--SSDAESSLVKVVAGKERREF 84
           MGCLVLPCYVMKRRRRR ST+PHLGYHRL+KSNFGRN+     AESSLVKVVAGKERREF
Sbjct: 1   MGCLVLPCYVMKRRRRRRSTQPHLGYHRLNKSNFGRNEYIGDHAESSLVKVVAGKERREF 60

Query: 85  LVDPFVLEENPFRTLIEKGGDSDDDEDGDGDHGKKKRVIFVDVDAILFEHLLWLMYNDCS 144
           LVDPFVLEENPFR LIEKGGD D+DEDGDG   K+KRVIFVDVDAILFEHLLWLMYNDCS
Sbjct: 61  LVDPFVLEENPFRILIEKGGDDDEDEDGDG---KRKRVIFVDVDAILFEHLLWLMYNDCS 120

Query: 145 SLFKLNVEEILDFYAQDF 160
           SLFKLNVEEILDFYAQDF
Sbjct: 121 SLFKLNVEEILDFYAQDF 135

BLAST of MELO3C003403 vs. NCBI nr
Match: gi|255557595|ref|XP_002519827.1| (PREDICTED: uncharacterized protein LOC8284609 [Ricinus communis])

HSP 1 Score: 147.5 bits (371), Expect = 2.0e-32
Identity = 82/137 (59.85%), Postives = 97/137 (70.80%), Query Frame = 1

Query: 25  MGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRNDSSDAESSLVKVVAGKERREFLVD 84
           M CLVLP  ++++R    +R  LGY  L +  FG  D        VKVV GKE+REFLVD
Sbjct: 1   MDCLVLPVSILRKRYTAGSR--LGYRPLTEDGFGGLDRP------VKVVVGKEKREFLVD 60

Query: 85  PFVLEENPFRTLIE--KGGDSDDDEDGDGDHGKKKRVIFVDVDAILFEHLLWLMYNDCSS 144
           PFVLEE+PFR LIE  K G  D + D      KK+R IFVDVDAILFEH+LWLMYNDCSS
Sbjct: 61  PFVLEESPFRVLIETVKKGSYDHNFDDM----KKRRTIFVDVDAILFEHMLWLMYNDCSS 120

Query: 145 LFKLNVEEILDFYAQDF 160
           LF+LN+EEI+DFYAQD+
Sbjct: 121 LFQLNLEEIIDFYAQDY 125

BLAST of MELO3C003403 vs. NCBI nr
Match: gi|657963897|ref|XP_008373568.1| (PREDICTED: uncharacterized protein LOC103436891 [Malus domestica])

HSP 1 Score: 141.7 bits (356), Expect = 1.1e-30
Identity = 76/135 (56.30%), Postives = 95/135 (70.37%), Query Frame = 1

Query: 25  MGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRNDSSDAESSLVKVVAGKERREFLVD 84
           M CLVLP  ++K+R    TR   GY  L K  +G +++       V VV GKE++EFLVD
Sbjct: 1   MACLVLPISMLKKRCM-GTRLQ-GYRPLTKDRYGNSENP------VIVVVGKEKKEFLVD 60

Query: 85  PFVLEENPFRTLIEKGGDSDDDEDGDGDHGKKKRVIFVDVDAILFEHLLWLMYNDCSSLF 144
           PFVLEENPFR L+E        E+ D   GK  R+IFVDVD+ILFEH+LWLMYNDCSSLF
Sbjct: 61  PFVLEENPFRVLMETMNKDKKVENFDDRTGKGSRMIFVDVDSILFEHMLWLMYNDCSSLF 120

Query: 145 KLNVEEILDFYAQDF 160
           +LN++EI+DFYAQD+
Sbjct: 121 ELNLKEIIDFYAQDY 127

BLAST of MELO3C003403 vs. NCBI nr
Match: gi|743848250|ref|XP_011028185.1| (PREDICTED: uncharacterized protein LOC105128288 [Populus euphratica])

HSP 1 Score: 141.4 bits (355), Expect = 1.4e-30
Identity = 80/134 (59.70%), Postives = 93/134 (69.40%), Query Frame = 1

Query: 25  MGCLVLPCYVMKRRRRRSTRPHLGYHRLHKSNFGRNDSSDAESSLVKVVAGKERREFLVD 84
           M CLVLP  ++   R+  TR  LGY  L +  FG  DS       V VV GKER+EFLVD
Sbjct: 1   MDCLVLPVSML---RKCYTRSRLGYRPLTEDGFGDLDSP------VTVVVGKERKEFLVD 60

Query: 85  PFVLEENPFRTLIEKGGDSDDDEDGDGDHGKKKRVIFVDVDAILFEHLLWLMYNDCSSLF 144
           PFVLEE+PFR LIE     D   D      ++KRVIFVDVDAILFEH+LWLMYNDCSSLF
Sbjct: 61  PFVLEESPFRVLIETV-KKDRVFDDTSRSREEKRVIFVDVDAILFEHMLWLMYNDCSSLF 120

Query: 145 KLNVEEILDFYAQD 159
           +LN++EI+DFYAQD
Sbjct: 121 QLNLKEIIDFYAQD 124

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LK59_CUCSA1.2e-6088.41Uncharacterized protein OS=Cucumis sativus GN=Csa_3G902380 PE=4 SV=1[more]
B9S1G2_RICCO1.4e-3259.85Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0864910 PE=4 SV=1[more]
B9N2N3_POPTR1.7e-3058.96Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s09020g PE=4 SV=1[more]
M5W8K6_PRUPE3.7e-3057.86Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025934mg PE=4 SV=1[more]
A0A0J8CHY6_BETVU3.7e-3054.23Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g106110 PE=4 S... [more]
Match NameE-valueIdentityDescription
AT2G35290.18.3e-2143.70 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659132004|ref|XP_008465964.1|1.6e-87100.00PREDICTED: uncharacterized protein LOC103503536 [Cucumis melo][more]
gi|778687951|ref|XP_011652654.1|1.7e-6088.41PREDICTED: uncharacterized protein LOC105435042 [Cucumis sativus][more]
gi|255557595|ref|XP_002519827.1|2.0e-3259.85PREDICTED: uncharacterized protein LOC8284609 [Ricinus communis][more]
gi|657963897|ref|XP_008373568.1|1.1e-3056.30PREDICTED: uncharacterized protein LOC103436891 [Malus domestica][more]
gi|743848250|ref|XP_011028185.1|1.4e-3059.70PREDICTED: uncharacterized protein LOC105128288 [Populus euphratica][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009733 response to auxin
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU46910melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C003403T1MELO3C003403T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU46910MU46910transcribed_cluster


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35296FAMILY NOT NAMEDcoord: 23..159
score: 1.9

The following gene(s) are paralogous to this gene:

None