MU46444 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU46444
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	RNA-binding protein
Location	chr1 : 21675702 .. 21710052 (+)
Sequence length	1124

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

TAAATTCACAACTTAATGGTAATTTAGAATGACCTCTTAGAATAGTCAACTGGACTGCCTTCGCCGTCTCTCTCTTATGAACCCTTCACCTGAGTAAGGTCCATTTTAATTCAGTTCCTATATCGGTTGTTGCATCATTCAAGAAGATTAAGGCTCTCATTAATAGTCACTTTCAGCTAGCCAATATTTTGCGGAACTCTTCTAAGCTTTTGGTAAGTGAAGATGGAAAGAAAGTCAAACGTAAGCAACCATTTTCTGAGTCAGATATGGAGGAGCTGCAATCTCGTATAGTAATTGCGGAGAACTTACCAGAGGATCATTGCCACCAAAACCTCATGAAGATATTTTCTGCTGTTGGGAGTGTTAAGAATATTCGAACTTGTCAACCTCAAATCTCAGATAGTGGAGCTTCTTCAACATCTAAATCTGCAAAAGCTGATGGAATGCATTACAGTAACAAGTTGCATGCATTTGTAGAATATGAATCAATGGAGCTGGCGGAGAAGGCTGTTGCAGAACTAAATGATGAAAGGAATTGGAGAAATGCGCTTAGGCTTCGTTTGATGCTTTCATGCTCGTCAAAATCTGCTCCAGTTCGTGGGAAGAAGGGACATAATGGGGAGATGAACTACAAAGATGTGGATGCCTCTGAACAGCCGGCTATTGAGAAGCATGTAGATGATCTTTCTGATCAAGTCGATGTTCATCCACCTGAACAACGAGAAGAGCATGGAAATGAGAAGGATGGTGGTGGGCAGAGAAGAGTTCGAAATAGGGTACGTGGTAAAGGGCGTGGTCGATCACAATACCATCATAATCACAATAATATACATAACCATGGGAACCATGTGGGAACACCACCTCCAAGTAGTTCAACCACCATCGAGCAGGCAGGTACGATGAAACAGCAGCCTCCAGGGCCACGAATGCCAGATGGGACAAGAGGCTTTGCGATGGGGCGGGGGAAGCCAGTGACTGTGAATATGACATGAAGGGAATGGAAAATACATGGAGAGGAGTGTGTGTGTGTGTCTGTATGGGTAGAAGAAAGAGTATGGTGCGGATGGAAGCTGTCTAATTGATAGGGCAAAAAGCAAAGGCAAAGCAAAACAATGGTGTGTTGA

Library


Library category	ESTs
melon VFLP2 library	1
melon CM-VEa library	1

Homology

[Close]

BLAST of MU46444 vs. Swiss-Prot
Match: LRP6B_ARATH (La-related protein 6B OS=Arabidopsis thaliana GN=LARP6B PE=1 SV=2)

HSP 1 Score: 261.2 bits (666), Expect = 1.8e-68
Identity = 155/315 (49.21%), Postives = 189/315 (60.00%), Query Frame = 3


Query: 114 VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIV 173
           VPI VVASFKKIKA+IN++ QLA +L+NS+KL VSEDGKKV+R  P +ES +EELQSRI+
Sbjct: 228 VPIHVVASFKKIKAVINNNSQLAAVLQNSAKLFVSEDGKKVRRISPITESAIEELQSRII 287

Query: 174 IAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQIXXXXXXXXXXXXXXXX-MHYSNKLHA 233
           +AENLPEDHC+QNLMKIFS VGSVKNIRTCQPQ                    +SNK+HA
Sbjct: 288 VAENLPEDHCYQNLMKIFSTVGSVKNIRTCQPQNNGSGAPPAARSAAKSDGTLFSNKVHA 347

Query: 234 FVEYESMELAEKAVAELNDERNWRNALRLRLMLSCSSKSAPV---RGKKGHNGEMNYKDV 293
           FVEYE +ELAE+AV EL++  NWR+ L++RLML   +K       RG+KGH+ ++ +++ 
Sbjct: 348 FVEYEIVELAERAVTELSEAGNWRSGLKVRLMLKHQTKEPKQGQGRGRKGHDADVEHEED 407

Query: 294 DA--SEQPAIEKHVDDLSDQVDVHPPEQR--EEHGNEKDXXXXXXXXXXXXXXXXXXS-- 353
           DA  SEQ  IEK  DD S + D H  EQ   E+ GNEK                      
Sbjct: 408 DATTSEQQPIEKQSDDCSGEWDTHMQEQPIGEDQGNEKAAGQRKGRNRGRGKGRGRGQPH 467

Query: 354 ---------------QYXXXXXXXXXXXXXVGTPPPSSS-TTIEQAGTMKQQPPGPRMPD 413
                           +             VGT P ++    +EQ G  KQQPPGPRMPD
Sbjct: 468 QNQNQNNNHSHNQNHNHNGRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGKQQPPGPRMPD 527

Query: 414 GTRGFAMGRGKPVTV 473
           GTRGF+MGRGKPV V
Sbjct: 528 GTRGFSMGRGKPVMV 542

Query: 474  533
           
Sbjct: 588  542

Query: 534  593
           
Sbjct: 648  542

Query: 594  653
           
Sbjct: 708  542

Query: 654  713
           
Sbjct: 768  542

Query: 714  773
           
Sbjct: 828  542

Query: 774  833
           
Sbjct: 888  542

Query: 834  893
           
Sbjct: 948  542

Query: 894  953
           
Sbjct: 1008  542

Query: 954  981
           
Sbjct: 1068  542

[Close]

BLAST of MU46444 vs. Swiss-Prot
Match: LRP6C_ARATH (La-related protein 6C OS=Arabidopsis thaliana GN=LARP6C PE=3 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.9e-47
Identity = 120/296 (40.54%), Postives = 159/296 (53.72%), Query Frame = 3


Query: 87  HLSKVHFNSVPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESD 146
           H+SK     VP+S +AS KKIKAL ++H  ++  LR+SSKL+VSEDGKKVKR   F++ D
Sbjct: 170 HISKDPEGYVPVSYIASTKKIKALTSNHHLVSLALRSSSKLVVSEDGKKVKRTSQFTDRD 229

Query: 147 MEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQIXXXXXXXXXXXXXXXXM 206
            EELQ R V+AENLP+DH +QNL KIF  VG+VK IR C P                   
Sbjct: 230 REELQGRTVVAENLPDDHSYQNLEKIFGVVGNVKAIRICHP-------PESNSSRPKGDF 289

Query: 207 HYSNKLHAFVEYESMELAEKAVAELNDERNWRNALRLRLMLSCSSKSAPVRGKKGHNGEM 266
             SNK+HA +EY++  +A+KAV +LNDERNWR  LR+RL+L CS KS  ++ ++  +G +
Sbjct: 290 LMSNKIHALIEYDNTVIADKAVEKLNDERNWRKGLRVRLLLRCSPKSV-LKNRRNFDGIL 349

Query: 267 NYKDVDASEQPAIEKHVDDLSDQVDVHPPE-QREEHGNEKDXXXXXXXXXXXXXXXXXXS 326
               +D  E P+ E       D   +H  E Q +  G++ +                  S
Sbjct: 350 ----ID-DELPSYESG----EDSPRLHLTESQLDNDGDDNNVGGLWGKGRGKGRGRSPRS 409

Query: 327 QYXXXXXXXXXXXXXVGTPPPSSSTTIEQAGTMKQQPPGPRMPDGTRGFAMGRGKP 386
                          V    PS  +   ++ + K    GPRMPDGTRGF MGRGKP
Sbjct: 410 YAVGGGGRSFGIGLGVSLGIPSLGS--HESSSPKTATKGPRMPDGTRGFTMGRGKP 446

Query: 387  446
           
Sbjct: 470  446

Query: 447  506
           
Sbjct: 530  446

Query: 507  566
           
Sbjct: 590  446

Query: 567  626
           
Sbjct: 650  446

Query: 627  686
           
Sbjct: 710  446

Query: 687  746
           
Sbjct: 770  446

Query: 747  806
           
Sbjct: 830  446

Query: 807  866
           
Sbjct: 890  446

Query: 867  926
           
Sbjct: 950  446

Query: 927  972
           
Sbjct: 1010  446

[Close]

BLAST of MU46444 vs. Swiss-Prot
Match: LRP6A_ARATH (La-related protein 6A OS=Arabidopsis thaliana GN=LARP6A PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.9e-26
Identity = 74/210 (35.24%), Postives = 107/210 (50.95%), Query Frame = 3


Query: 114 VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIV 173
           VPIS +A+F K+K L   H  + + L+ SS L+VS D KKVKR  P  E  + + +   V
Sbjct: 138 VPISTIATFHKMKKLTRDHALIVSALKESSFLVVSADEKKVKRLSPLPE--IRDPKIFTV 197

Query: 174 IAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQIXXXXXXXXXXXXXXXXMHYSNKLHAF 233
           + ENLPEDH ++N+ +IF   GS+K++  C P                       +LHAF
Sbjct: 198 LVENLPEDHSNENIREIFGKAGSIKSVSICDPNAVEESEKGGKKENFIR-----TRLHAF 257

Query: 234 VEYESMELAEKAVAELNDERNWRNALRLRLMLSCSSKSAPVRGKKGHNGEMNYKDVDASE 293
           VEYE++E AEKA A LN+E++WRN LR++L+   + K A  R  +        ++VD  +
Sbjct: 258 VEYETVEAAEKAAATLNNEQDWRNGLRVKLLEQAAGKFAQRRPAR--------REVDKEK 317

Query: 294 QPAIEKHVDDLSDQVDVHPPEQREEHGNEK 353
                 H     DQ      ++  EH N +
Sbjct: 318 DTTGRVH-----DQTGGEKNKKTREHQNHR 327

Query: 354  413
           
Sbjct: 378  327

Query: 414  473
           
Sbjct: 438  327

Query: 474  533
           
Sbjct: 498  327

Query: 534  593
           
Sbjct: 558  327

Query: 594  653
           
Sbjct: 618  327

Query: 654  713
           
Sbjct: 678  327

Query: 714  744
           
Sbjct: 738  327

HSP 2 Score: 47.0 bits (110), Expect = 5.3e-04
Identity = 18/25 (72.00%), Postives = 20/25 (80.00%), Query Frame = 3


Query: 900 MKQQPPGPRMPDGTRGFAMGRGKPV 959
           + ++PPGPRMPDGTRGF MGRGK +
Sbjct: 386 VSKRPPGPRMPDGTRGFTMGRGKAI 410

Query: 960  975
           
Sbjct: 446  410

[Close]

BLAST of MU46444 vs. Swiss-Prot
Match: LARP7_DANRE (La-related protein 7 OS=Danio rerio GN=larp7 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.9e-07
Identity = 42/138 (30.43%), Postives = 70/138 (50.72%), Query Frame = 3


Query: 114 VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIV 173
           + I+V+ +F ++K L      +A  L+NS+ + V+++G +++RK+P  E+  +++ SR V
Sbjct: 77  IDIAVLTTFNRMKNLTADVKLIARALKNSTIVEVNDEGTRIRRKEPLGETP-KDVDSRTV 136

Query: 174 IAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQIXXXXXXXXXXXXXXXXMHYSNKLHAF 233
             E LP+   H  L ++FS  G V  I    P+                     +K  AF
Sbjct: 137 YVELLPKTVTHIWLERVFSKCGHVVYISI--PRYKSTR---------------HSKGFAF 196

Query: 234 VEYESMELAEKAVAELND 293
           VE+E+ E A+KAV  LN+
Sbjct: 197 VEFETQEQAQKAVEMLNN 196

Query: 294  353
           
Sbjct: 257  196

Query: 354  413
           
Sbjct: 317  196

Query: 414  473
           
Sbjct: 377  196

Query: 474  528
           
Sbjct: 437  196

[Close]

BLAST of MU46444 vs. TrEMBL
Match: A0A061EPK5_THECC (RNA-binding protein, putative isoform 2 OS=Theobroma cacao GN=TCM_021541 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.2e-82
Identity = 174/294 (59.18%), Postives = 203/294 (69.05%), Query Frame = 3


Query: 114 VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIV 173
           VPISVVASFKKIKALI +H QLA +LRNS KL+VSEDGKKV+R+ P +ESDMEELQSRI+
Sbjct: 139 VPISVVASFKKIKALITTHAQLATVLRNSLKLVVSEDGKKVRRQHPLTESDMEELQSRII 198

Query: 174 IAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQIXXXXXXXXXXXXXXXXMHYSNKLHAF 233
           +AENLPEDHCHQNLMKIFS+VGSVK IRTCQPQ                 MH+SNKLHAF
Sbjct: 199 VAENLPEDHCHQNLMKIFSSVGSVKTIRTCQPQPSGGGVSSASRTAKSDGMHFSNKLHAF 258

Query: 234 VEYESMELAEKAVAELNDERNWRNALRLRLMLSCSSKSAPVRGKKGHNGEMNYKDVDA-- 293
           VEYES+ELAEKAVAELNDE NWR+ LR+RLML   SK    RGKKGH+GE +Y++ DA  
Sbjct: 259 VEYESVELAEKAVAELNDEGNWRSGLRVRLMLRRVSKPTHTRGKKGHDGEGHYEEDDAST 318

Query: 294 SEQPAIEKHVDDLSDQVDVHPPE-QREEHGNEKDXXXXXXXXXXXXXXXXXXSQYXXXXX 353
           SEQ + +K  +D S   D+H  E   EEH NEK+                  +QY     
Sbjct: 319 SEQQSNDKQQEDPSQLSDIHSHEYPGEEHSNEKE-GGQKKGRNRGRGKGRGRAQY--HNN 378

Query: 354 XXXXXXXXVGTPPPSSSTTI-EQAGTMKQQPPGPRMPDGTRGFAMGRGKPVTVN 413
                   VGTPP ++S  +  +  T+ +QPPGPRMPDGTRGFAMGRGKPV VN
Sbjct: 379 QHNSRGNHVGTPPSATSNLVSNEQATVAKQPPGPRMPDGTRGFAMGRGKPVAVN 429

Query: 414  473
           
Sbjct: 439  429

Query: 474  533
           
Sbjct: 499  429

Query: 534  593
           
Sbjct: 559  429

Query: 594  653
           
Sbjct: 619  429

Query: 654  713
           
Sbjct: 679  429

Query: 714  773
           
Sbjct: 739  429

Query: 774  833
           
Sbjct: 799  429

Query: 834  893
           
Sbjct: 859  429

Query: 894  953
           
Sbjct: 919  429

Query: 954  984
           
Sbjct: 979  429

[Close]

BLAST of MU46444 vs. TrEMBL
Match: A0A061EXJ3_THECC (RNA-binding protein, putative isoform 1 OS=Theobroma cacao GN=TCM_021541 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.2e-82
Identity = 174/294 (59.18%), Postives = 203/294 (69.05%), Query Frame = 3


Query: 114 VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIV 173
           VPISVVASFKKIKALI +H QLA +LRNS KL+VSEDGKKV+R+ P +ESDMEELQSRI+
Sbjct: 208 VPISVVASFKKIKALITTHAQLATVLRNSLKLVVSEDGKKVRRQHPLTESDMEELQSRII 267

Query: 174 IAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQIXXXXXXXXXXXXXXXXMHYSNKLHAF 233
           +AENLPEDHCHQNLMKIFS+VGSVK IRTCQPQ                 MH+SNKLHAF
Sbjct: 268 VAENLPEDHCHQNLMKIFSSVGSVKTIRTCQPQPSGGGVSSASRTAKSDGMHFSNKLHAF 327

Query: 234 VEYESMELAEKAVAELNDERNWRNALRLRLMLSCSSKSAPVRGKKGHNGEMNYKDVDA-- 293
           VEYES+ELAEKAVAELNDE NWR+ LR+RLML   SK    RGKKGH+GE +Y++ DA  
Sbjct: 328 VEYESVELAEKAVAELNDEGNWRSGLRVRLMLRRVSKPTHTRGKKGHDGEGHYEEDDAST 387

Query: 294 SEQPAIEKHVDDLSDQVDVHPPE-QREEHGNEKDXXXXXXXXXXXXXXXXXXSQYXXXXX 353
           SEQ + +K  +D S   D+H  E   EEH NEK+                  +QY     
Sbjct: 388 SEQQSNDKQQEDPSQLSDIHSHEYPGEEHSNEKE-GGQKKGRNRGRGKGRGRAQY--HNN 447

Query: 354 XXXXXXXXVGTPPPSSSTTI-EQAGTMKQQPPGPRMPDGTRGFAMGRGKPVTVN 413
                   VGTPP ++S  +  +  T+ +QPPGPRMPDGTRGFAMGRGKPV VN
Sbjct: 448 QHNSRGNHVGTPPSATSNLVSNEQATVAKQPPGPRMPDGTRGFAMGRGKPVAVN 498

Query: 414  473
           
Sbjct: 508  498

Query: 474  533
           
Sbjct: 568  498

Query: 534  593
           
Sbjct: 628  498

Query: 594  653
           
Sbjct: 688  498

Query: 654  713
           
Sbjct: 748  498

Query: 714  773
           
Sbjct: 808  498

Query: 774  833
           
Sbjct: 868  498

Query: 834  893
           
Sbjct: 928  498

Query: 894  953
           
Sbjct: 988  498

Query: 954  984
           
Sbjct: 1048  498

[Close]

BLAST of MU46444 vs. TrEMBL
Match: M5W8S4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005181mg PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 7.5e-82
Identity = 175/293 (59.73%), Postives = 197/293 (67.24%), Query Frame = 3


Query: 114 VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIV 173
           VPISVVASFKKIKAL+NS  QLA +LRNSSKL+V EDGKKV+R+ P ++SDMEELQSRIV
Sbjct: 186 VPISVVASFKKIKALVNSQSQLATVLRNSSKLVVHEDGKKVRRQHPLTQSDMEELQSRIV 245

Query: 174 IAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQIXXXXXXXXXXXXXXXXMHYSNKLHAF 233
           +AENLPEDHCHQNLMK+FSA GSVK IRTCQPQ                   +SNKLHAF
Sbjct: 246 VAENLPEDHCHQNLMKVFSAAGSVKTIRTCQPQTSNSSASPASRSTKADSTLFSNKLHAF 305

Query: 234 VEYESMELAEKAVAELNDERNWRNALRLRLMLSCSSKSAPVRGKKGHNGEMNYKDVDAS- 293
           VEYES ELAEKAVAELNDE NWR+ L++RLML   SK+A VRGKKG +GE+   + DAS 
Sbjct: 306 VEYESPELAEKAVAELNDEANWRSGLKVRLMLRRVSKAAQVRGKKGQDGEVQLDEEDASS 365

Query: 294 -EQPAIEKHVDDLSDQVDVHPPEQREEHGNEKDXXXXXXXXXXXXXXXXXXSQYXXXXXX 353
            EQ A EK   D S Q D H  E  EEHGN+K+                   QY      
Sbjct: 366 PEQQANEKQSVDSSQQSDAHSHEHGEEHGNDKE-VGQRKGRNRGRGKGRGRGQY----HH 425

Query: 354 XXXXXXXVGTPPPSSSTTIEQAGTMKQQPPGPRMPDGTRGFAMGRGKPVTVNM 413
                  VG PP +   +IEQ G  K QPPGPRMPDGTRGFAMGRGKPV VN+
Sbjct: 426 NTNRGNHVGPPPHNLVGSIEQPGVAK-QPPGPRMPDGTRGFAMGRGKPVAVNI 472

Query: 414  473
           
Sbjct: 486  472

Query: 474  533
           
Sbjct: 546  472

Query: 534  593
           
Sbjct: 606  472

Query: 594  653
           
Sbjct: 666  472

Query: 654  713
           
Sbjct: 726  472

Query: 714  773
           
Sbjct: 786  472

Query: 774  833
           
Sbjct: 846  472

Query: 834  893
           
Sbjct: 906  472

Query: 894  953
           
Sbjct: 966  472

Query: 954  987
           
Sbjct: 1026  472

[Close]

BLAST of MU46444 vs. TrEMBL
Match: W9RF44_9ROSA (La-related protein 7 OS=Morus notabilis GN=L484_020345 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.3e-81
Identity = 170/303 (56.11%), Postives = 205/303 (67.66%), Query Frame = 3


Query: 90  LSKVHFNSVPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDM 149
           +SK     VPISVVASFKKIKALIN+H QLA +LRNSSKL+VSEDGKKV+R  P +ESDM
Sbjct: 183 ISKDPEGFVPISVVASFKKIKALINTHSQLAAVLRNSSKLVVSEDGKKVRRLHPLTESDM 242

Query: 150 EELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQIXXXXXXXXXXXXXXXXMH 209
           +ELQSRI++AENLPEDHCHQNLMKIFS+VGSVK IRTCQPQ                 M 
Sbjct: 243 DELQSRIIVAENLPEDHCHQNLMKIFSSVGSVKTIRTCQPQTPNGGAPSASRAAKSDNML 302

Query: 210 YSNKLHAFVEYESMELAEKAVAELNDERNWRNALRLRLMLSCSSKSAPVRGKKGHNGEMN 269
           +SNKLHAFVEYES+ELAEKAV ELNDE NWR+ LR+RLM+   SK + VRG+KGH+G+M 
Sbjct: 303 FSNKLHAFVEYESVELAEKAVTELNDEGNWRSGLRVRLMVKRMSKPSQVRGRKGHDGDMQ 362

Query: 270 YKDVDA--SEQPAIEKHVDDLSDQVDVHPPEQ-REEHGNEKDXXXXXXXXXXXXXXXXXX 329
            ++ DA  +E P   K ++D S Q D    E   EEH ++K+                  
Sbjct: 363 GEEDDACTTESPVNSKQLEDASQQSDAPSHEHPGEEHVSDKEGGQKKGRSRGRGKGRGRG 422

Query: 330 SQYXXXXXXXXXXXXXVGTPPPSSSTTIEQAGTMKQQPPGPRMPDGTRGFAMGRGKPVTV 389
             +             VGTPP ++++   ++G  KQQPPGPRMPDGTRGFAMGRGKPV V
Sbjct: 423 HYH-----HNNRGNNVVGTPPSNNNSVGMESGVAKQQPPGPRMPDGTRGFAMGRGKPVAV 480

Query: 390 NMT 449
           N+T
Sbjct: 483 NIT 480

Query: 450  509
           
Sbjct: 543  480

Query: 510  569
           
Sbjct: 603  480

Query: 570  629
           
Sbjct: 663  480

Query: 630  689
           
Sbjct: 723  480

Query: 690  749
           
Sbjct: 783  480

Query: 750  809
           
Sbjct: 843  480

Query: 810  869
           
Sbjct: 903  480

Query: 870  929
           
Sbjct: 963  480

Query: 930  989
           
Sbjct: 1023  480

[Close]

BLAST of MU46444 vs. TrEMBL
Match: B9SSZ3_RICCO (Lupus la ribonucleoprotein, putative OS=Ricinus communis GN=RCOM_1269060 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 2.2e-81
Identity = 181/334 (54.19%), Postives = 218/334 (65.27%), Query Frame = 3


Query: 15  NGNLE*PLRIVNWTAFAVS---LL*TLHL----SKVHFNSVPISVVASFKKIKALINSHF 74
           NGN E   +++N   +  S   L  T HL    +K     VPISVVASFKK+KA INS+ 
Sbjct: 197 NGNDEPMQKLLNQVEYYFSDLNLATTDHLMRFINKDPDGYVPISVVASFKKVKAAINSNS 256

Query: 75  QLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIVIAENLPEDHCHQNLMKIFSA 134
            LA+ILRNS+KL+VSEDGK+V+R+ P +E D+EELQSRIV+AENLPEDHCHQNLMKIFSA
Sbjct: 257 HLASILRNSAKLVVSEDGKRVRRQNPLTELDVEELQSRIVVAENLPEDHCHQNLMKIFSA 316

Query: 135 VGSVKNIRTCQPQIXXXXXXXXXXXXXXXXMHYSNKLHAFVEYESMELAEKAVAELNDER 194
           VGSVK IRTC PQ                 MH+SNKLHAFVEYES+E+AEKAVAELNDE+
Sbjct: 317 VGSVKTIRTCPPQTSGGGASSASRSAKGEGMHFSNKLHAFVEYESVEIAEKAVAELNDEQ 376

Query: 195 NWRNALRLRLMLSCSSKSAPVRGKKGHNGE--MNYKDVDASEQPAIEKHVDDLSDQVDVH 254
           NWR+ LR+RLML  +SK    RGKKGH+G+     ++V  SEQP  EK ++D S Q D H
Sbjct: 377 NWRSGLRVRLMLKRASKPTQARGKKGHDGQGHSEEEEVSTSEQPPNEKQIEDPSQQYDGH 436

Query: 255 PPEQR-EEHGNEKDXXXXXXXXXXXXXXXXXXSQYXXXXXXXXXXXXXVGTPPPSSSTTI 314
             E   E+H NEKD                   QY             VGT PPS++  I
Sbjct: 437 SHEHSGEDHVNEKD-GAQRKGRNRGRGKGRGRGQY-----HHNNRGNHVGT-PPSNNLII 496

Query: 315 EQAGTMKQQPPGPRMPDGTRGFAMGRGKPVTVNM 374
            +  +M +QPPGPRMPDGT+GFAMGRGKPV VN+
Sbjct: 497 NEQPSMAKQPPGPRMPDGTKGFAMGRGKPVAVNI 523

Query: 375  434
           
Sbjct: 557  523

Query: 435  494
           
Sbjct: 617  523

Query: 495  554
           
Sbjct: 677  523

Query: 555  614
           
Sbjct: 737  523

Query: 615  674
           
Sbjct: 797  523

Query: 675  734
           
Sbjct: 857  523

Query: 735  794
           
Sbjct: 917  523

Query: 795  854
           
Sbjct: 977  523

Query: 855  914
           
Sbjct: 1037  523

Query: 915  974
           
Sbjct: 1097  523

Query: 975  987
           
Sbjct: 1157  523

[Close]

BLAST of MU46444 vs. TAIR10
Match: AT2G43970.1 (AT2G43970.1 RNA-binding protein)

HSP 1 Score: 261.2 bits (666), Expect = 1.0e-69
Identity = 155/315 (49.21%), Postives = 189/315 (60.00%), Query Frame = 3


Query: 114 VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIV 173
           VPI VVASFKKIKA+IN++ QLA +L+NS+KL VSEDGKKV+R  P +ES +EELQSRI+
Sbjct: 228 VPIHVVASFKKIKAVINNNSQLAAVLQNSAKLFVSEDGKKVRRISPITESAIEELQSRII 287

Query: 174 IAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQIXXXXXXXXXXXXXXXX-MHYSNKLHA 233
           +AENLPEDHC+QNLMKIFS VGSVKNIRTCQPQ                    +SNK+HA
Sbjct: 288 VAENLPEDHCYQNLMKIFSTVGSVKNIRTCQPQNNGSGAPPAARSAAKSDGTLFSNKVHA 347

Query: 234 FVEYESMELAEKAVAELNDERNWRNALRLRLMLSCSSKSAPV---RGKKGHNGEMNYKDV 293
           FVEYE +ELAE+AV EL++  NWR+ L++RLML   +K       RG+KGH+ ++ +++ 
Sbjct: 348 FVEYEIVELAERAVTELSEAGNWRSGLKVRLMLKHQTKEPKQGQGRGRKGHDADVEHEED 407

Query: 294 DA--SEQPAIEKHVDDLSDQVDVHPPEQR--EEHGNEKDXXXXXXXXXXXXXXXXXXS-- 353
           DA  SEQ  IEK  DD S + D H  EQ   E+ GNEK                      
Sbjct: 408 DATTSEQQPIEKQSDDCSGEWDTHMQEQPIGEDQGNEKAAGQRKGRNRGRGKGRGRGQPH 467

Query: 354 ---------------QYXXXXXXXXXXXXXVGTPPPSSS-TTIEQAGTMKQQPPGPRMPD 413
                           +             VGT P ++    +EQ G  KQQPPGPRMPD
Sbjct: 468 QNQNQNNNHSHNQNHNHNGRGNHHHHHHHQVGTQPSNNPMNNMEQPGMGKQQPPGPRMPD 527

Query: 414 GTRGFAMGRGKPVTV 473
           GTRGF+MGRGKPV V
Sbjct: 528 GTRGFSMGRGKPVMV 542

Query: 474  533
           
Sbjct: 588  542

Query: 534  593
           
Sbjct: 648  542

Query: 594  653
           
Sbjct: 708  542

Query: 654  713
           
Sbjct: 768  542

Query: 714  773
           
Sbjct: 828  542

Query: 774  833
           
Sbjct: 888  542

Query: 834  893
           
Sbjct: 948  542

Query: 894  953
           
Sbjct: 1008  542

Query: 954  981
           
Sbjct: 1068  542

[Close]

BLAST of MU46444 vs. TAIR10
Match: AT3G19090.1 (AT3G19090.1 RNA-binding protein)

HSP 1 Score: 190.3 bits (482), Expect = 2.2e-48
Identity = 120/296 (40.54%), Postives = 159/296 (53.72%), Query Frame = 3


Query: 87  HLSKVHFNSVPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESD 146
           H+SK     VP+S +AS KKIKAL ++H  ++  LR+SSKL+VSEDGKKVKR   F++ D
Sbjct: 170 HISKDPEGYVPVSYIASTKKIKALTSNHHLVSLALRSSSKLVVSEDGKKVKRTSQFTDRD 229

Query: 147 MEELQSRIVIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQIXXXXXXXXXXXXXXXXM 206
            EELQ R V+AENLP+DH +QNL KIF  VG+VK IR C P                   
Sbjct: 230 REELQGRTVVAENLPDDHSYQNLEKIFGVVGNVKAIRICHP-------PESNSSRPKGDF 289

Query: 207 HYSNKLHAFVEYESMELAEKAVAELNDERNWRNALRLRLMLSCSSKSAPVRGKKGHNGEM 266
             SNK+HA +EY++  +A+KAV +LNDERNWR  LR+RL+L CS KS  ++ ++  +G +
Sbjct: 290 LMSNKIHALIEYDNTVIADKAVEKLNDERNWRKGLRVRLLLRCSPKSV-LKNRRNFDGIL 349

Query: 267 NYKDVDASEQPAIEKHVDDLSDQVDVHPPE-QREEHGNEKDXXXXXXXXXXXXXXXXXXS 326
               +D  E P+ E       D   +H  E Q +  G++ +                  S
Sbjct: 350 ----ID-DELPSYESG----EDSPRLHLTESQLDNDGDDNNVGGLWGKGRGKGRGRSPRS 409

Query: 327 QYXXXXXXXXXXXXXVGTPPPSSSTTIEQAGTMKQQPPGPRMPDGTRGFAMGRGKP 386
                          V    PS  +   ++ + K    GPRMPDGTRGF MGRGKP
Sbjct: 410 YAVGGGGRSFGIGLGVSLGIPSLGS--HESSSPKTATKGPRMPDGTRGFTMGRGKP 446

Query: 387  446
           
Sbjct: 470  446

Query: 447  506
           
Sbjct: 530  446

Query: 507  566
           
Sbjct: 590  446

Query: 567  626
           
Sbjct: 650  446

Query: 627  686
           
Sbjct: 710  446

Query: 687  746
           
Sbjct: 770  446

Query: 747  806
           
Sbjct: 830  446

Query: 807  866
           
Sbjct: 890  446

Query: 867  926
           
Sbjct: 950  446

Query: 927  972
           
Sbjct: 1010  446

[Close]

BLAST of MU46444 vs. TAIR10
Match: AT5G46250.1 (AT5G46250.1 RNA-binding protein)

HSP 1 Score: 120.9 bits (302), Expect = 1.6e-27
Identity = 74/210 (35.24%), Postives = 107/210 (50.95%), Query Frame = 3


Query: 114 VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIV 173
           VPIS +A+F K+K L   H  + + L+ SS L+VS D KKVKR  P  E  + + +   V
Sbjct: 138 VPISTIATFHKMKKLTRDHALIVSALKESSFLVVSADEKKVKRLSPLPE--IRDPKIFTV 197

Query: 174 IAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQIXXXXXXXXXXXXXXXXMHYSNKLHAF 233
           + ENLPEDH ++N+ +IF   GS+K++  C P                       +LHAF
Sbjct: 198 LVENLPEDHSNENIREIFGKAGSIKSVSICDPNAVEESEKGGKKENFIR-----TRLHAF 257

Query: 234 VEYESMELAEKAVAELNDERNWRNALRLRLMLSCSSKSAPVRGKKGHNGEMNYKDVDASE 293
           VEYE++E AEKA A LN+E++WRN LR++L+   + K A  R  +        ++VD  +
Sbjct: 258 VEYETVEAAEKAAATLNNEQDWRNGLRVKLLEQAAGKFAQRRPAR--------REVDKEK 317

Query: 294 QPAIEKHVDDLSDQVDVHPPEQREEHGNEK 353
                 H     DQ      ++  EH N +
Sbjct: 318 DTTGRVH-----DQTGGEKNKKTREHQNHR 327

Query: 354  413
           
Sbjct: 378  327

Query: 414  473
           
Sbjct: 438  327

Query: 474  533
           
Sbjct: 498  327

Query: 534  593
           
Sbjct: 558  327

Query: 594  653
           
Sbjct: 618  327

Query: 654  713
           
Sbjct: 678  327

Query: 714  744
           
Sbjct: 738  327

HSP 2 Score: 47.0 bits (110), Expect = 3.0e-05
Identity = 18/25 (72.00%), Postives = 20/25 (80.00%), Query Frame = 3


Query: 900 MKQQPPGPRMPDGTRGFAMGRGKPV 959
           + ++PPGPRMPDGTRGF MGRGK +
Sbjct: 386 VSKRPPGPRMPDGTRGFTMGRGKAI 410

Query: 960  975
           
Sbjct: 446  410

[Close]

BLAST of MU46444 vs. NCBI nr
Match: gi|659092724|ref|XP_008447188.1| (PREDICTED: la-related protein 6B isoform X5 [Cucumis melo])

HSP 1 Score: 461.5 bits (1186), Expect = 1.4e-126
Identity = 243/293 (82.94%), Postives = 245/293 (83.62%), Query Frame = 3


Query: 111 SVPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRI 170
           +VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRI
Sbjct: 14  NVPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRI 73

Query: 171 VIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQIXXXXXXXXXXXXXXXXMHYSNKLHA 230
           VIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQI                MHYSNKLHA
Sbjct: 74  VIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKLHA 133

Query: 231 FVEYESMELAEKAVAELNDERNWRNALRLRLMLSCSSKSAPVRGKKGHNGEMNYKDVDAS 290
           FVEYES+ELAEKAVAELNDE NWRNALRLRLMLSCSSKSAPVRGKKGHNGEMNYKDVDAS
Sbjct: 134 FVEYESVELAEKAVAELNDEGNWRNALRLRLMLSCSSKSAPVRGKKGHNGEMNYKDVDAS 193

Query: 291 EQPAIEKHVDDLSDQVDVHPPEQREEHGNEKDXXXXXXXXXXXXXXXXXXSQYXXXXXXX 350
           EQPAIEKHVDDLSDQVDVHPPEQREEHGNEKD                  SQY       
Sbjct: 194 EQPAIEKHVDDLSDQVDVHPPEQREEHGNEKDGGGQRRVRNRVRGKGRGRSQYHHNHNNI 253

Query: 351 XXXXXXVGTPPPSSSTTIEQAGTMKQQPPGPRMPDGTRGFAMGRGKPVTVNMT 410
                 VGTPPPSSSTTIEQAGTMKQQPPGPRMPDGTRGFAMGRGKPVTVNMT
Sbjct: 254 HNHGNHVGTPPPSSSTTIEQAGTMKQQPPGPRMPDGTRGFAMGRGKPVTVNMT 306

Query: 411  470
           
Sbjct: 314  306

Query: 471  530
           
Sbjct: 374  306

Query: 531  590
           
Sbjct: 434  306

Query: 591  650
           
Sbjct: 494  306

Query: 651  710
           
Sbjct: 554  306

Query: 711  770
           
Sbjct: 614  306

Query: 771  830
           
Sbjct: 674  306

Query: 831  890
           
Sbjct: 734  306

Query: 891  950
           
Sbjct: 794  306

Query: 951  990
           
Sbjct: 854  306

[Close]

BLAST of MU46444 vs. NCBI nr
Match: gi|659092715|ref|XP_008447184.1| (PREDICTED: la-related protein 6B isoform X1 [Cucumis melo])

HSP 1 Score: 461.1 bits (1185), Expect = 1.9e-126
Identity = 243/292 (83.22%), Postives = 244/292 (83.56%), Query Frame = 3


Query: 114 VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIV 173
           VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIV
Sbjct: 201 VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIV 260

Query: 174 IAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQIXXXXXXXXXXXXXXXXMHYSNKLHAF 233
           IAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQI                MHYSNKLHAF
Sbjct: 261 IAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKLHAF 320

Query: 234 VEYESMELAEKAVAELNDERNWRNALRLRLMLSCSSKSAPVRGKKGHNGEMNYKDVDASE 293
           VEYES+ELAEKAVAELNDE NWRNALRLRLMLSCSSKSAPVRGKKGHNGEMNYKDVDASE
Sbjct: 321 VEYESVELAEKAVAELNDEGNWRNALRLRLMLSCSSKSAPVRGKKGHNGEMNYKDVDASE 380

Query: 294 QPAIEKHVDDLSDQVDVHPPEQREEHGNEKDXXXXXXXXXXXXXXXXXXSQYXXXXXXXX 353
           QPAIEKHVDDLSDQVDVHPPEQREEHGNEKD                  SQY        
Sbjct: 381 QPAIEKHVDDLSDQVDVHPPEQREEHGNEKDGGGQRRVRNRVRGKGRGRSQYHHNHNNIH 440

Query: 354 XXXXXVGTPPPSSSTTIEQAGTMKQQPPGPRMPDGTRGFAMGRGKPVTVNMT 413
                VGTPPPSSSTTIEQAGTMKQQPPGPRMPDGTRGFAMGRGKPVTVNMT
Sbjct: 441 NHGNHVGTPPPSSSTTIEQAGTMKQQPPGPRMPDGTRGFAMGRGKPVTVNMT 492

Query: 414  473
           
Sbjct: 501  492

Query: 474  533
           
Sbjct: 561  492

Query: 534  593
           
Sbjct: 621  492

Query: 594  653
           
Sbjct: 681  492

Query: 654  713
           
Sbjct: 741  492

Query: 714  773
           
Sbjct: 801  492

Query: 774  833
           
Sbjct: 861  492

Query: 834  893
           
Sbjct: 921  492

Query: 894  953
           
Sbjct: 981  492

Query: 954  990
           
Sbjct: 1041  492

[Close]

BLAST of MU46444 vs. NCBI nr
Match: gi|778725783|ref|XP_011659001.1| (PREDICTED: la-related protein 6B isoform X2 [Cucumis sativus])

HSP 1 Score: 457.6 bits (1176), Expect = 2.1e-125
Identity = 240/293 (81.91%), Postives = 244/293 (83.28%), Query Frame = 3


Query: 111 SVPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRI 170
           +VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRI
Sbjct: 14  NVPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRI 73

Query: 171 VIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQIXXXXXXXXXXXXXXXXMHYSNKLHA 230
           VIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQI                MHYSNKLHA
Sbjct: 74  VIAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKLHA 133

Query: 231 FVEYESMELAEKAVAELNDERNWRNALRLRLMLSCSSKSAPVRGKKGHNGEMNYKDVDAS 290
           FVEYES+ELAEKAVAELNDE NWRNALRLRLMLSCSSKSAPVRGKKGHNGEMNYKDVD S
Sbjct: 134 FVEYESVELAEKAVAELNDEGNWRNALRLRLMLSCSSKSAPVRGKKGHNGEMNYKDVDTS 193

Query: 291 EQPAIEKHVDDLSDQVDVHPPEQREEHGNEKDXXXXXXXXXXXXXXXXXXSQYXXXXXXX 350
           EQPAIEKHVDDLSDQVDVHPPEQREEHGNEKD                  SQY       
Sbjct: 194 EQPAIEKHVDDLSDQVDVHPPEQREEHGNEKDGGGQRRVRNRVRGKGRGRSQYHHNHNNN 253

Query: 351 XXXXXXVGTPPPSSSTTIEQAGTMKQQPPGPRMPDGTRGFAMGRGKPVTVNMT 410
                 +GTPPPSSSTTIEQAGTMKQQPPGPRMPDGTRGF+MGRGKPVTVNMT
Sbjct: 254 HSHGNHLGTPPPSSSTTIEQAGTMKQQPPGPRMPDGTRGFSMGRGKPVTVNMT 306

Query: 411  470
           
Sbjct: 314  306

Query: 471  530
           
Sbjct: 374  306

Query: 531  590
           
Sbjct: 434  306

Query: 591  650
           
Sbjct: 494  306

Query: 651  710
           
Sbjct: 554  306

Query: 711  770
           
Sbjct: 614  306

Query: 771  830
           
Sbjct: 674  306

Query: 831  890
           
Sbjct: 734  306

Query: 891  950
           
Sbjct: 794  306

Query: 951  990
           
Sbjct: 854  306

[Close]

BLAST of MU46444 vs. NCBI nr
Match: gi|449444086|ref|XP_004139806.1| (PREDICTED: la-related protein 6B isoform X1 [Cucumis sativus])

HSP 1 Score: 457.2 bits (1175), Expect = 2.7e-125
Identity = 240/292 (82.19%), Postives = 243/292 (83.22%), Query Frame = 3


Query: 114 VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIV 173
           VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIV
Sbjct: 201 VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIV 260

Query: 174 IAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQIXXXXXXXXXXXXXXXXMHYSNKLHAF 233
           IAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQI                MHYSNKLHAF
Sbjct: 261 IAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKLHAF 320

Query: 234 VEYESMELAEKAVAELNDERNWRNALRLRLMLSCSSKSAPVRGKKGHNGEMNYKDVDASE 293
           VEYES+ELAEKAVAELNDE NWRNALRLRLMLSCSSKSAPVRGKKGHNGEMNYKDVD SE
Sbjct: 321 VEYESVELAEKAVAELNDEGNWRNALRLRLMLSCSSKSAPVRGKKGHNGEMNYKDVDTSE 380

Query: 294 QPAIEKHVDDLSDQVDVHPPEQREEHGNEKDXXXXXXXXXXXXXXXXXXSQYXXXXXXXX 353
           QPAIEKHVDDLSDQVDVHPPEQREEHGNEKD                  SQY        
Sbjct: 381 QPAIEKHVDDLSDQVDVHPPEQREEHGNEKDGGGQRRVRNRVRGKGRGRSQYHHNHNNNH 440

Query: 354 XXXXXVGTPPPSSSTTIEQAGTMKQQPPGPRMPDGTRGFAMGRGKPVTVNMT 413
                +GTPPPSSSTTIEQAGTMKQQPPGPRMPDGTRGF+MGRGKPVTVNMT
Sbjct: 441 SHGNHLGTPPPSSSTTIEQAGTMKQQPPGPRMPDGTRGFSMGRGKPVTVNMT 492

Query: 414  473
           
Sbjct: 501  492

Query: 474  533
           
Sbjct: 561  492

Query: 534  593
           
Sbjct: 621  492

Query: 594  653
           
Sbjct: 681  492

Query: 654  713
           
Sbjct: 741  492

Query: 714  773
           
Sbjct: 801  492

Query: 774  833
           
Sbjct: 861  492

Query: 834  893
           
Sbjct: 921  492

Query: 894  953
           
Sbjct: 981  492

Query: 954  990
           
Sbjct: 1041  492

[Close]

BLAST of MU46444 vs. NCBI nr
Match: gi|659092717|ref|XP_008447185.1| (PREDICTED: la-related protein 6B isoform X2 [Cucumis melo])

HSP 1 Score: 353.6 bits (906), Expect = 4.2e-94
Identity = 184/202 (91.09%), Postives = 185/202 (91.58%), Query Frame = 3


Query: 114 VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIV 173
           VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIV
Sbjct: 201 VPISVVASFKKIKALINSHFQLANILRNSSKLLVSEDGKKVKRKQPFSESDMEELQSRIV 260

Query: 174 IAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQIXXXXXXXXXXXXXXXXMHYSNKLHAF 233
           IAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQI                MHYSNKLHAF
Sbjct: 261 IAENLPEDHCHQNLMKIFSAVGSVKNIRTCQPQISDSGASSTSKSAKADGMHYSNKLHAF 320

Query: 234 VEYESMELAEKAVAELNDERNWRNALRLRLMLSCSSKSAPVRGKKGHNGEMNYKDVDASE 293
           VEYES+ELAEKAVAELNDE NWRNALRLRLMLSCSSKSAPVRGKKGHNGEMNYKDVDASE
Sbjct: 321 VEYESVELAEKAVAELNDEGNWRNALRLRLMLSCSSKSAPVRGKKGHNGEMNYKDVDASE 380

Query: 294 QPAIEKHVDDLSDQVDVHPPEQ 353
           QPAIEKHVDDLSDQVDVHPPEQ
Sbjct: 381 QPAIEKHVDDLSDQVDVHPPEQ 402

Query: 354  413
           
Sbjct: 441  402

Query: 414  473
           
Sbjct: 501  402

Query: 474  533
           
Sbjct: 561  402

Query: 534  593
           
Sbjct: 621  402

Query: 594  653
           
Sbjct: 681  402

Query: 654  713
           
Sbjct: 741  402

Query: 714  720
           
Sbjct: 801  402

The following BLAST results are available for this feature:

BLAST of MU46444 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LRP6B_ARATH	1.8e-68	49.21	La-related protein 6B OS=Arabidopsis thaliana GN=LARP6B PE=1 SV=2	[more]
LRP6C_ARATH	3.9e-47	40.54	La-related protein 6C OS=Arabidopsis thaliana GN=LARP6C PE=3 SV=1	[more]
LRP6A_ARATH	2.9e-26	35.24	La-related protein 6A OS=Arabidopsis thaliana GN=LARP6A PE=2 SV=1	[more]
LARP7_DANRE	3.9e-07	30.43	La-related protein 7 OS=Danio rerio GN=larp7 PE=2 SV=1	[more]

BLAST of MU46444 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061EPK5_THECC	1.2e-82	59.18	RNA-binding protein, putative isoform 2 OS=Theobroma cacao GN=TCM_021541 PE=4 SV...	[more]
A0A061EXJ3_THECC	1.2e-82	59.18	RNA-binding protein, putative isoform 1 OS=Theobroma cacao GN=TCM_021541 PE=4 SV...	[more]
M5W8S4_PRUPE	7.5e-82	59.73	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005181mg PE=4 SV=1	[more]
W9RF44_9ROSA	1.3e-81	56.11	La-related protein 7 OS=Morus notabilis GN=L484_020345 PE=4 SV=1	[more]
B9SSZ3_RICCO	2.2e-81	54.19	Lupus la ribonucleoprotein, putative OS=Ricinus communis GN=RCOM_1269060 PE=4 SV...	[more]

BLAST of MU46444 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G43970.1	1.0e-69	49.21	RNA-binding protein	[more]
AT3G19090.1	2.2e-48	40.54	RNA-binding protein	[more]
AT5G46250.1	1.6e-27	35.24	RNA-binding protein	[more]

BLAST of MU46444 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659092724\|ref\|XP_008447188.1\|	1.4e-126	82.94	PREDICTED: la-related protein 6B isoform X5 [Cucumis melo]	[more]
gi\|659092715\|ref\|XP_008447184.1\|	1.9e-126	83.22	PREDICTED: la-related protein 6B isoform X1 [Cucumis melo]	[more]
gi\|778725783\|ref\|XP_011659001.1\|	2.1e-125	81.91	PREDICTED: la-related protein 6B isoform X2 [Cucumis sativus]	[more]
gi\|449444086\|ref\|XP_004139806.1\|	2.7e-125	82.19	PREDICTED: la-related protein 6B isoform X1 [Cucumis sativus]	[more]
gi\|659092717\|ref\|XP_008447185.1\|	4.2e-94	91.09	PREDICTED: la-related protein 6B isoform X2 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C012695	MELO3C012695	gene
MELO3C012697	MELO3C012697	gene
MELO3C012696	MELO3C012696	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
GA32YE05FM1	GA32YE05FM1	EST
VEa0013J22	VEa0013J22	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 7..104 score: 9
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	G3DSA:3.30.70.330		coord: 5..112 score: 2.6
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 4..101 score: 1.1
None	No IPR available	PANTHER	PTHR22792	LUPUS LA PROTEIN-RELATED	coord: 4..240 score: 2.2E
None	No IPR available	PANTHER	PTHR22792:SF52	LA-RELATED PROTEIN 6B	coord: 4..240 score: 2.2E