MU45946 (transcribed_cluster) Melon (DHL92) v3.5.1

NameMU45946
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionLow temperature and salt responsive protein
Locationchr2 : 180326 .. 181191 (+)
Sequence length589
The following sequences are available for this feature:

transcribed_cluster sequence

ACCTTCATCACTACCCATTACCTCATTCCAATAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTCTCAATCTCTGTTTGTTTGTTTGGTGCAAATCAGAAGAAGAAGAAGAAAGAAAAAGAAAAATGGCAGACGAACGAACAACAAATTGCATCGATATCCTCCTCGCTATTCTCCTCCCTCCTCTTGGTGTCTTTCTCAAATTTGGATGCCAAGTTGAGTTTTGGATCTGCTTGGTCCTAACTTTCTTTGGTTACATCCCTGGCATTATTTATGCTGTTTATGCCATCACCAAGTGATCACCGAATTCAAAGGATTGATGGAAGGAATTATTGGAACTCATCATCATGGTCTCTCCTCACCGACACTCTCCCTTCCTTTTTCTATTTTCCTTTTTGCTAATTTCTCTTGATCTCTGTTTTGTGTGTTTGCTTGTGTGATAATCATCCGATCGATCAAAGACATCTACACAATTGCTGCTTCTTTTTTTTTTTTTTTTGTAATTTGGAAATTGAATTATTTGTGGGGGTAATTTAATTGTGTGTGGTTCTTGTTGTAATGTTTGAATTGGGTGCAGTAAAGAAGAA
BLAST of MU45946 vs. Swiss-Prot
Match: LTI6B_ORYSI (Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica GN=LTI6B PE=3 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 6.6e-14
Identity = 36/52 (69.23%), Postives = 36/52 (69.23%), Query Frame = 2

Query: 143 TTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 202
           T NCID          GVFLKFGC  EFWICL+LTF GYIPGIIYA+YAITK
Sbjct: 4   TANCIDILIAIILPPLGVFLKFGCGHEFWICLLLTFLGYIPGIIYAIYAITK 55

Query: 203 262
           
Sbjct: 64  55

Query: 263 299
           
Sbjct: 124 55

BLAST of MU45946 vs. Swiss-Prot
Match: LTI6B_ORYSJ (Hydrophobic protein LTI6B OS=Oryza sativa subsp. japonica GN=LTI6B PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 6.6e-14
Identity = 36/52 (69.23%), Postives = 36/52 (69.23%), Query Frame = 2

Query: 143 TTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 202
           T NCID          GVFLKFGC  EFWICL+LTF GYIPGIIYA+YAITK
Sbjct: 4   TANCIDILIAIILPPLGVFLKFGCGHEFWICLLLTFLGYIPGIIYAIYAITK 55

Query: 203 262
           
Sbjct: 64  55

Query: 263 299
           
Sbjct: 124 55

BLAST of MU45946 vs. Swiss-Prot
Match: LTI6A_ORYSJ (Hydrophobic protein LTI6A OS=Oryza sativa subsp. japonica GN=LTI6A PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.5e-13
Identity = 36/57 (63.16%), Postives = 38/57 (66.67%), Query Frame = 2

Query: 128 MADERTTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 187
           MAD  T  CID          GVF KFGC +EFWICL+LTFFGY+PGIIYAV+ ITK
Sbjct: 1   MADS-TATCIDIILAIILPPLGVFFKFGCGIEFWICLLLTFFGYLPGIIYAVWVITK 56

Query: 188 247
           
Sbjct: 61  56

Query: 248 299
           
Sbjct: 121 56

BLAST of MU45946 vs. Swiss-Prot
Match: RCI2B_ARATH (Hydrophobic protein RCI2B OS=Arabidopsis thaliana GN=RCI2B PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-11
Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 2

Query: 191 GVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 250
           GVFLKFGC+VEFWICL+LT FGY+PGI+YA+Y ITK
Sbjct: 19  GVFLKFGCKVEFWICLILTLFGYLPGILYALYIITK 54

Query: 251 299
           
Sbjct: 79  54

BLAST of MU45946 vs. Swiss-Prot
Match: RCI2A_ARATH (Hydrophobic protein RCI2A OS=Arabidopsis thaliana GN=RCI2A PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.1e-11
Identity = 31/52 (59.62%), Postives = 33/52 (63.46%), Query Frame = 2

Query: 143 TTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 202
           T   +D          GVFL+FGC VEFWICLVLT  GYIPGIIYA+Y +TK
Sbjct: 3   TATFVDIIIAILLPPLGVFLRFGCGVEFWICLVLTLLGYIPGIIYAIYVLTK 54

Query: 203 262
           
Sbjct: 63  54

Query: 263 299
           
Sbjct: 123 54

BLAST of MU45946 vs. TrEMBL
Match: A0A0A0M1D6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560745 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.6e-17
Identity = 46/57 (80.70%), Postives = 46/57 (80.70%), Query Frame = 2

Query: 128 MADERTTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 187
           MADE TTNCID          GVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK
Sbjct: 1   MADEGTTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 57

Query: 188 247
           
Sbjct: 61  57

Query: 248 299
           
Sbjct: 121 57

BLAST of MU45946 vs. TrEMBL
Match: M0RN96_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.9e-15
Identity = 42/57 (73.68%), Postives = 44/57 (77.19%), Query Frame = 2

Query: 128 MADERTTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 187
           MADE T NCID          GVFLKFGCQVEFWICL+LT FGY+PGIIYAVYAITK
Sbjct: 1   MADEGTVNCIDILVAILLPPLGVFLKFGCQVEFWICLLLTLFGYLPGIIYAVYAITK 57

Query: 188 247
           
Sbjct: 61  57

Query: 248 299
           
Sbjct: 121 57

BLAST of MU45946 vs. TrEMBL
Match: A0A058ZTP7_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_L01633 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.4e-15
Identity = 43/57 (75.44%), Postives = 44/57 (77.19%), Query Frame = 2

Query: 128 MADERTTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 187
           MADE T NCID          GVFLKFGCQVEFWICLVLT FG+IPGIIYAVYAITK
Sbjct: 61  MADEGTMNCIDILLAIILPPLGVFLKFGCQVEFWICLVLTLFGWIPGIIYAVYAITK 117

Query: 188 247
           
Sbjct: 121 117

Query: 248 299
           
Sbjct: 181 117

BLAST of MU45946 vs. TrEMBL
Match: A0A059CWH7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C03713 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.4e-15
Identity = 43/57 (75.44%), Postives = 44/57 (77.19%), Query Frame = 2

Query: 128 MADERTTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 187
           MADE T NCID          GVFLKFGCQVEFWICLVLT FG+IPGIIYAVYAITK
Sbjct: 86  MADEGTMNCIDILLAIILPPLGVFLKFGCQVEFWICLVLTLFGWIPGIIYAVYAITK 142

Query: 188 247
           
Sbjct: 146 142

Query: 248 299
           
Sbjct: 206 142

BLAST of MU45946 vs. TrEMBL
Match: A0A0B0P7E4_GOSAR (Hydrophobic RCI2B-like protein OS=Gossypium arboreum GN=F383_27445 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 5.4e-15
Identity = 41/57 (71.93%), Postives = 43/57 (75.44%), Query Frame = 2

Query: 128 MADERTTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 187
           MAD+ T  CID          GVFLKFGCQVEFWICLVLT FGYIPGIIYA+YAITK
Sbjct: 1   MADDSTATCIDILLAIILPPLGVFLKFGCQVEFWICLVLTLFGYIPGIIYAIYAITK 57

Query: 188 247
           
Sbjct: 61  57

Query: 248 299
           
Sbjct: 121 57

BLAST of MU45946 vs. TAIR10
Match: AT3G05890.1 (AT3G05890.1 Low temperature and salt responsive protein family)

HSP 1 Score: 71.6 bits (174), Expect = 5.9e-13
Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 2

Query: 191 GVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 250
           GVFLKFGC+VEFWICL+LT FGY+PGI+YA+Y ITK
Sbjct: 19  GVFLKFGCKVEFWICLILTLFGYLPGILYALYIITK 54

Query: 251 299
           
Sbjct: 79  54

BLAST of MU45946 vs. TAIR10
Match: AT3G05880.1 (AT3G05880.1 Low temperature and salt responsive protein family)

HSP 1 Score: 70.1 bits (170), Expect = 1.7e-12
Identity = 31/52 (59.62%), Postives = 33/52 (63.46%), Query Frame = 2

Query: 143 TTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 202
           T   +D          GVFL+FGC VEFWICLVLT  GYIPGIIYA+Y +TK
Sbjct: 3   TATFVDIIIAILLPPLGVFLRFGCGVEFWICLVLTLLGYIPGIIYAIYVLTK 54

Query: 203 262
           
Sbjct: 63  54

Query: 263 299
           
Sbjct: 123 54

BLAST of MU45946 vs. TAIR10
Match: AT2G38905.1 (AT2G38905.1 Low temperature and salt responsive protein family)

HSP 1 Score: 63.2 bits (152), Expect = 2.1e-10
Identity = 25/34 (73.53%), Postives = 28/34 (82.35%), Query Frame = 2

Query: 191 GVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAI 250
           GVFL++GC VEFWICL+LT  GYIPGIIYA+Y +
Sbjct: 19  GVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVL 52

Query: 251 293
           
Sbjct: 79  52

BLAST of MU45946 vs. TAIR10
Match: AT1G57550.1 (AT1G57550.1 Low temperature and salt responsive protein family)

HSP 1 Score: 59.3 bits (142), Expect = 3.1e-09
Identity = 22/36 (61.11%), Postives = 29/36 (80.56%), Query Frame = 2

Query: 191 GVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 250
           GVFL++G  +EFW+CL+LT F +IPG+IYA+Y +TK
Sbjct: 17  GVFLRYGLGLEFWVCLLLTLFAFIPGLIYAIYVLTK 52

Query: 251 299
           
Sbjct: 77  52

BLAST of MU45946 vs. TAIR10
Match: AT2G24040.1 (AT2G24040.1 Low temperature and salt responsive protein family)

HSP 1 Score: 52.0 bits (123), Expect = 4.9e-07
Identity = 24/35 (68.57%), Postives = 27/35 (77.14%), Query Frame = 2

Query: 191 GVFLKFGC-QVEFWICLVLTFFGYIPGIIYAVYAI 250
           GV L+ GC  VEF+ICL+LT  GY+PGIIYA+YAI
Sbjct: 21  GVCLRHGCCTVEFFICLILTCLGYLPGIIYAIYAI 55

Query: 251 293
           
Sbjct: 81  55

BLAST of MU45946 vs. NCBI nr
Match: gi|659099264|ref|XP_008450512.1| (PREDICTED: hydrophobic protein LTI6B-like [Cucumis melo])

HSP 1 Score: 99.4 bits (246), Expect = 7.5e-18
Identity = 47/57 (82.46%), Postives = 47/57 (82.46%), Query Frame = 2

Query: 128 MADERTTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 187
           MADERTTNCID          GVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK
Sbjct: 1   MADERTTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 57

Query: 188 247
           
Sbjct: 61  57

Query: 248 299
           
Sbjct: 121 57

BLAST of MU45946 vs. NCBI nr
Match: gi|700210895|gb|KGN65991.1| (hypothetical protein Csa_1G560745 [Cucumis sativus])

HSP 1 Score: 96.7 bits (239), Expect = 4.9e-17
Identity = 46/57 (80.70%), Postives = 46/57 (80.70%), Query Frame = 2

Query: 128 MADERTTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 187
           MADE TTNCID          GVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK
Sbjct: 1   MADEGTTNCIDILLAILLPPLGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 57

Query: 188 247
           
Sbjct: 61  57

Query: 248 299
           
Sbjct: 121 57

BLAST of MU45946 vs. NCBI nr
Match: gi|502112986|ref|XP_004494506.1| (PREDICTED: hydrophobic protein LTI6B-like [Cicer arietinum])

HSP 1 Score: 92.4 bits (228), Expect = 9.2e-16
Identity = 43/57 (75.44%), Postives = 44/57 (77.19%), Query Frame = 2

Query: 128 MADERTTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 187
           MADE T NCID          GVFLKFGC VEFWICLVLTFFGYIPGIIYA+YAITK
Sbjct: 1   MADEGTANCIDILLAILLPPLGVFLKFGCHVEFWICLVLTFFGYIPGIIYAIYAITK 57

Query: 188 247
           
Sbjct: 61  57

Query: 248 299
           
Sbjct: 121 57

BLAST of MU45946 vs. NCBI nr
Match: gi|629076871|gb|KCW44804.1| (hypothetical protein EUGRSUZ_L01633, partial [Eucalyptus grandis])

HSP 1 Score: 90.1 bits (222), Expect = 4.6e-15
Identity = 43/57 (75.44%), Postives = 44/57 (77.19%), Query Frame = 2

Query: 128 MADERTTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 187
           MADE T NCID          GVFLKFGCQVEFWICLVLT FG+IPGIIYAVYAITK
Sbjct: 61  MADEGTMNCIDILLAIILPPLGVFLKFGCQVEFWICLVLTLFGWIPGIIYAVYAITK 117

Query: 188 247
           
Sbjct: 121 117

Query: 248 299
           
Sbjct: 181 117

BLAST of MU45946 vs. NCBI nr
Match: gi|629117630|gb|KCW82305.1| (hypothetical protein EUGRSUZ_C03713 [Eucalyptus grandis])

HSP 1 Score: 90.1 bits (222), Expect = 4.6e-15
Identity = 43/57 (75.44%), Postives = 44/57 (77.19%), Query Frame = 2

Query: 128 MADERTTNCIDXXXXXXXXXXGVFLKFGCQVEFWICLVLTFFGYIPGIIYAVYAITK 187
           MADE T NCID          GVFLKFGCQVEFWICLVLT FG+IPGIIYAVYAITK
Sbjct: 86  MADEGTMNCIDILLAIILPPLGVFLKFGCQVEFWICLVLTLFGWIPGIIYAVYAITK 142

Query: 188 247
           
Sbjct: 146 142

Query: 248 299
           
Sbjct: 206 142

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
LTI6B_ORYSI6.6e-1469.23Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica GN=LTI6B PE=3 SV=2[more]
LTI6B_ORYSJ6.6e-1469.23Hydrophobic protein LTI6B OS=Oryza sativa subsp. japonica GN=LTI6B PE=2 SV=1[more]
LTI6A_ORYSJ2.5e-1363.16Hydrophobic protein LTI6A OS=Oryza sativa subsp. japonica GN=LTI6A PE=2 SV=1[more]
RCI2B_ARATH1.1e-1180.56Hydrophobic protein RCI2B OS=Arabidopsis thaliana GN=RCI2B PE=2 SV=1[more]
RCI2A_ARATH3.1e-1159.62Hydrophobic protein RCI2A OS=Arabidopsis thaliana GN=RCI2A PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0M1D6_CUCSA2.6e-1780.70Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560745 PE=4 SV=1[more]
M0RN96_MUSAM1.9e-1573.68Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1[more]
A0A058ZTP7_EUCGR2.4e-1575.44Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_L01633 PE=4 ... [more]
A0A059CWH7_EUCGR2.4e-1575.44Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C03713 PE=4 SV=1[more]
A0A0B0P7E4_GOSAR5.4e-1571.93Hydrophobic RCI2B-like protein OS=Gossypium arboreum GN=F383_27445 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G05890.15.9e-1380.56 Low temperature and salt responsive protein family[more]
AT3G05880.11.7e-1259.62 Low temperature and salt responsive protein family[more]
AT2G38905.12.1e-1073.53 Low temperature and salt responsive protein family[more]
AT1G57550.13.1e-0961.11 Low temperature and salt responsive protein family[more]
AT2G24040.14.9e-0768.57 Low temperature and salt responsive protein family[more]
Match NameE-valueIdentityDescription
gi|659099264|ref|XP_008450512.1|7.5e-1882.46PREDICTED: hydrophobic protein LTI6B-like [Cucumis melo][more]
gi|700210895|gb|KGN65991.1|4.9e-1780.70hypothetical protein Csa_1G560745 [Cucumis sativus][more]
gi|502112986|ref|XP_004494506.1|9.2e-1675.44PREDICTED: hydrophobic protein LTI6B-like [Cicer arietinum][more]
gi|629076871|gb|KCW44804.1|4.6e-1575.44hypothetical protein EUGRSUZ_L01633, partial [Eucalyptus grandis][more]
gi|629117630|gb|KCW82305.1|4.6e-1575.44hypothetical protein EUGRSUZ_C03713 [Eucalyptus grandis][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C015238MELO3C015238gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
AA5YC04FM1AA5YC04FM1EST
CA13YN06FM1CA13YN06FM1EST
LA6YO17FM1LA6YO17FM1EST