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The following sequences are available for this feature:
transcribed_cluster sequence TACTACATACACAATATGGGTAGAGCAGAACCAATTAAGGATGTGAATGACTCAGAAGTGAAATTTGCTGCAGGGCAAGCAGTTAAAATCCATAACGATCAAAAACACGATACATTGGTTTTCATTCGTGTAGTGAATGGTCTGAAGCAGGAAGTTGATACTGCCAAGCTGTATTCTCTTCTGATAGAAGCTACAAATGGTGATGGAACTCATTGGGGATATATCGCTAAGATTAAGTTGTGGCCTAAGGCCCCAAGTCATTATGATCCATATTCCCATACCTTTGAGCTCATATCTTGGGAAGATCCCCTCAAATTCTGGAACTAAGTATTCCAATGTTATCTTTTTACATCTTTACATCTTTACATCTTTACATCATAATAATATGTCCTTCTCTATATATAGAGAGAGGGCATTATT
BLAST of CU178219 vs. Swiss-Prot
Match: CYT4_ARATH (Cysteine proteinase inhibitor 4 OS=Arabidopsis thaliana GN=CYS4 PE=3 SV=2) HSP 1 Score: 51.6 bits (122), Expect = 8.1e-06 Identity = 31/78 (39.74%), Postives = 42/78 (53.85%), Query Frame = 1
Query: 16 MGRAEPIKDVNDSEVKFAAGQAVKIHNDQKHDTLVFIRVVNGLKQEVDTAKLYSLLIEAT 75
+G +PIK+V+D +V A A++ HN + + LVF++VV G Q V K Y L I A
Sbjct: 29 LGSRKPIKNVSDPDVVAVAKYAIEEHNKESKEKLVFVKVVEGTTQVVSGTK-YDLKIAAK 88
Query: 76 NGDGTHWGYIAKI--KLW 135
+G G Y A + KLW
Sbjct: 89 DGGGKIKNYEAVVVEKLW 105
Query: 136 195
Sbjct: 149 105
Query: 196 244
Sbjct: 209 105
BLAST of CU178219 vs. TrEMBL
Match: A0A0A0LVH4_CUCSA (Cystatin Hv-CPI6 OS=Cucumis sativus GN=Csa_1G123470 PE=4 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 1.5e-54 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1
Query: 16 MGRAEPIKDVNDSEVKFAAGQAVKIHNDQKHDTLVFIRVVNGLKQEVDTAKLYSLLIEAT 75
MGRAEPIKDVNDSEVKFAAGQAVKIHNDQKHDTLVFIRVVNGLKQEVDTAKLYSLLIEAT
Sbjct: 1 MGRAEPIKDVNDSEVKFAAGQAVKIHNDQKHDTLVFIRVVNGLKQEVDTAKLYSLLIEAT 60
Query: 76 NGDGTHWGYIAKIKLWPKAPSHYDPYSHTFELISWEDPLKFWN 135
NGDGTHWGYIAKIKLWPKAPSHYDPYSHTFELISWEDPLKFWN
Sbjct: 61 NGDGTHWGYIAKIKLWPKAPSHYDPYSHTFELISWEDPLKFWN 103
Query: 136 195
Sbjct: 121 103
Query: 196 255
Sbjct: 181 103
Query: 256 315
Sbjct: 241 103
Query: 316 325
Sbjct: 301 103
BLAST of CU178219 vs. NCBI nr
Match: gi|700209736|gb|KGN64832.1| (Cystatin Hv-CPI6 [Cucumis sativus]) HSP 1 Score: 222.2 bits (565), Expect = 5.5e-55 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 1
Query: 16 MGRAEPIKDVNDSEVKFAAGQAVKIHNDQKHDTLVFIRVVNGLKQEVDTAKLYSLLIEAT 75
MGRAEPIKDVNDSEVKFAAGQAVKIHNDQKHDTLVFIRVVNGLKQEVDTAKLYSLLIEAT
Sbjct: 1 MGRAEPIKDVNDSEVKFAAGQAVKIHNDQKHDTLVFIRVVNGLKQEVDTAKLYSLLIEAT 60
Query: 76 NGDGTHWGYIAKIKLWPKAPSHYDPYSHTFELISWEDPLKFWN 135
NGDGTHWGYIAKIKLWPKAPSHYDPYSHTFELISWEDPLKFWN
Sbjct: 61 NGDGTHWGYIAKIKLWPKAPSHYDPYSHTFELISWEDPLKFWN 103
Query: 136 195
Sbjct: 121 103
Query: 196 255
Sbjct: 181 103
Query: 256 315
Sbjct: 241 103
Query: 316 325
Sbjct: 301 103
BLAST of CU178219 vs. NCBI nr
Match: gi|727555227|ref|XP_010449778.1| (PREDICTED: cysteine proteinase inhibitor 4-like [Camelina sativa]) HSP 1 Score: 60.8 bits (146), Expect = 2.1e-06 Identity = 36/83 (43.37%), Postives = 47/83 (56.63%), Query Frame = 1
Query: 16 MGRAEPIKDVNDSEVKFAAGQAVKIHNDQKHDTLVFIRVVNGLKQEVDTAKLYSLLIEAT 75
+G A+PIKDV+D V A A++ HN Q + LVF++VV G Q V K Y L I A
Sbjct: 26 LGGAKPIKDVSDPNVVAIANYAIEEHNKQSKENLVFVKVVEGTTQVVSGTK-YDLKIAAK 85
Query: 76 NGDGTHWGYIAKI--KLWPKAPS 135
NG G Y A + KLW ++ S
Sbjct: 86 NGGGQIKNYEAVVVEKLWLRSKS 107
Query: 136 195
Sbjct: 146 107
Query: 196 255
Sbjct: 206 107
Query: 256 259
Sbjct: 266 107
BLAST of CU178219 vs. NCBI nr
Match: gi|567221422|ref|XP_006414340.1| (hypothetical protein EUTSA_v10026611mg [Eutrema salsugineum]) HSP 1 Score: 58.9 bits (141), Expect = 8.1e-06 Identity = 34/79 (43.04%), Postives = 47/79 (59.49%), Query Frame = 1
Query: 13 NMGRAEPIKDVNDSEVKFAAGQAVKIHNDQKHDTLVFIRVVNGLKQEVDTAKLYSLLIEA 72
N+G +PIKDV+D V+ A A++ HN Q LVF +VV G K++V + K Y L+I A
Sbjct: 22 NLGGWKPIKDVSDPNVEAIAKYAIEEHNKQSKANLVFEKVVRG-KEQVVSGKKYDLIIAA 81
Query: 73 TNGDGTHWGYIAKI--KLW 132
NG G Y A + +LW
Sbjct: 82 KNGGGATKNYEAVVVERLW 99
Query: 133 192
Sbjct: 142 99
Query: 193 244
Sbjct: 202 99
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| CYT4_ARATH | 8.1e-06 | 39.74 | Cysteine proteinase inhibitor 4 OS=Arabidopsis thaliana GN=CYS4 PE=3 SV=2 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LVH4_CUCSA | 1.5e-54 | 100.00 | Cystatin Hv-CPI6 OS=Cucumis sativus GN=Csa_1G123470 PE=4 SV=1 | [more] |
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR020381 | Proteinase inhibitor I25, cystatin, conserved region |
This transcribed_cluster is associated with the following gene feature(s):
The following EST feature(s) are a part of this transcribed_cluster:
Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR020381 | Proteinase inhibitor I25, cystatin, conserved region | PFAM | PF16845 | SQAPI | coord: 12..77
score: 3.4 |
| None | No IPR available | GENE3D | G3DSA:3.10.450.10 | | coord: 6..103
score: 2. |
| None | No IPR available | unknown | SSF54403 | Cystatin/monellin | coord: 4..71
score: 1.8 |
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