CU173286 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU173286
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionCalmodulin-like protein 27
LocationChr1 : 2662284 .. 2662518 (-)
Sequence length242
The following sequences are available for this feature:

transcribed_cluster sequence

GACCTCTACGATCAGGACCGTAACGGCCTTATTTTCTTCTAGTTCCGAGCTCCATCTCGTTCTCAATCGCCTCGGAATCAGTTGTTCTAAGGAAGACTGTCAAAAAATGATCAACTCCGTTGATTCGGATGGAGACGGAAATGTGAATTTCGAAAGAGTTTTAAGGAAGATGATGACGGATAATTCCAAATCGAAGGCCGCTCAAACAGAAACGGAACTGCCGCGGCGCACCCTAGCCCTAA
BLAST of CU173286 vs. Swiss-Prot
Match: CML27_ARATH (Probable calcium-binding protein CML27 OS=Arabidopsis thaliana GN=CML27 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 3.3e-12
Identity = 39/63 (61.90%), Postives = 42/63 (66.67%), Query Frame = 2

Query: 38  SSSELHLVLNRLGISCSKEDCQKMINSVDSDGDGNVNFERVLRKMMTD----NSKSKAAQ 97
           S+SELH VLNRLG+SCS EDC +MI  VD+DGDGNVNFE   +KMMT     NS   AA 
Sbjct: 109 SASELHQVLNRLGMSCSVEDCTRMIGPVDADGDGNVNFEE-FQKMMTSSSLLNSNGSAAP 168

Query: 98  TET 157
             T
Sbjct: 169 PST 170

Query: 158 215
           
Sbjct: 229 170

BLAST of CU173286 vs. Swiss-Prot
Match: CML26_ARATH (Probable calcium-binding protein CML26 OS=Arabidopsis thaliana GN=CML26 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.1e-10
Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 2

Query: 38  SSSELHLVLNRLGISCSKEDCQKMINSVDSDGDGNVNFERVLRKMMT 97
           SSSE+H VLNRLG++CS EDC +MI  VD+DGDGNVNFE   +KMM+
Sbjct: 106 SSSEIHKVLNRLGMTCSVEDCVRMIGHVDTDGDGNVNFEE-FQKMMS 151

Query: 98  157
           
Sbjct: 166 151

Query: 158 179
           
Sbjct: 226 151

BLAST of CU173286 vs. Swiss-Prot
Match: CML23_ARATH (Probable calcium-binding protein CML23 OS=Arabidopsis thaliana GN=CML23 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 7.6e-09
Identity = 28/50 (56.00%), Postives = 34/50 (68.00%), Query Frame = 2

Query: 38  SSSELHLVLNRLGISCSKEDCQKMINSVDSDGDGNVNFERVLRKMMTDNS 97
           S++ELH V+  LG  CS +DCQ+MIN VDSDGDG V+FE   + MM + S
Sbjct: 107 SANELHSVMKNLGEKCSIQDCQRMINKVDSDGDGCVDFEEFKKMMMINGS 156

Query: 98  157
           
Sbjct: 167 156

Query: 158 188
           
Sbjct: 227 156

BLAST of CU173286 vs. Swiss-Prot
Match: ALL8_OLEEU (Calcium-binding allergen Ole e 8 OS=Olea europaea PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.4e-07
Identity = 29/50 (58.00%), Postives = 34/50 (68.00%), Query Frame = 2

Query: 38  SSSELHLVLNRLGISCSKEDCQKMINSVDSDGDGNVNFERVLRKMMTDNS 97
           SS ELH +L RLG   ++ DC +MI SVDSDGDG V+FE   +KMMT+ S
Sbjct: 113 SSVELHKILTRLGERYAEHDCVEMIKSVDSDGDGYVSFEE-FKKMMTNKS 161

Query: 98  157
           
Sbjct: 173 161

Query: 158 188
           
Sbjct: 233 161

BLAST of CU173286 vs. Swiss-Prot
Match: CML24_ARATH (Calcium-binding protein CML24 OS=Arabidopsis thaliana GN=CML24 PE=2 SV=2)

HSP 1 Score: 55.1 bits (131), Expect = 4.2e-07
Identity = 26/48 (54.17%), Postives = 33/48 (68.75%), Query Frame = 2

Query: 38  SSSELHLVLNRLGISCSKEDCQKMINSVDSDGDGNVNFERVLRKMMTD 97
           S+ ELH V+  LG  CS +DC+KMI+ VD DGDG VNF+   +KMM++
Sbjct: 111 SAKELHSVMKNLGEKCSVQDCKKMISKVDIDGDGCVNFDE-FKKMMSN 157

Query: 98  157
           
Sbjct: 171 157

Query: 158 182
           
Sbjct: 231 157

BLAST of CU173286 vs. TrEMBL
Match: A0A0A0LPP8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025020 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.5e-19
Identity = 52/56 (92.86%), Postives = 52/56 (92.86%), Query Frame = 2

Query: 38  SSSELHLVLNRLGISCSKEDCQKMINSVDSDGDGNVNFERVLRKMMTDNSKSKAAQ 97
           S SELHLVLNRLGISCSKEDCQKMINSVDSDGDGNVNFE   RKMMTDNSKSKAAQ
Sbjct: 125 SQSELHLVLNRLGISCSKEDCQKMINSVDSDGDGNVNFEE-FRKMMTDNSKSKAAQ 179

Query: 98  157
           
Sbjct: 185 179

Query: 158 206
           
Sbjct: 245 179

BLAST of CU173286 vs. TrEMBL
Match: V4KYC9_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10008945mg PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 3.7e-10
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 2

Query: 38  SSSELHLVLNRLGISCSKEDCQKMINSVDSDGDGNVNFERVLRKMMTDNS 97
           S+SELH VLNRLG+SCS EDC +MI  VD+DGDGNVNFE   +KMMT +S
Sbjct: 105 SASELHQVLNRLGMSCSLEDCSRMIGPVDADGDGNVNFEE-FQKMMTSSS 153

Query: 98  157
           
Sbjct: 165 153

Query: 158 188
           
Sbjct: 225 153

BLAST of CU173286 vs. TrEMBL
Match: M4EAW5_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 4.8e-10
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 2

Query: 38  SSSELHLVLNRLGISCSKEDCQKMINSVDSDGDGNVNFERVLRKMMTDNS 97
           S++ELH VLNRLG+SCS EDC KMI  VD+DGDGNVNFE   +KMMT +S
Sbjct: 109 SAAELHQVLNRLGMSCSVEDCAKMIGPVDADGDGNVNFEE-FQKMMTSSS 157

Query: 98  157
           
Sbjct: 169 157

Query: 158 188
           
Sbjct: 229 157

BLAST of CU173286 vs. TrEMBL
Match: A0A0D3CB55_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 4.8e-10
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 2

Query: 38  SSSELHLVLNRLGISCSKEDCQKMINSVDSDGDGNVNFERVLRKMMTDNS 97
           S++ELH VLNRLG+SCS EDC KMI  VD+DGDGNVNFE   +KMMT +S
Sbjct: 109 SAAELHQVLNRLGMSCSVEDCTKMIGPVDADGDGNVNFEE-FQKMMTSSS 157

Query: 98  157
           
Sbjct: 169 157

Query: 158 188
           
Sbjct: 229 157

BLAST of CU173286 vs. TrEMBL
Match: A0A078G1L6_BRANA (BnaC05g13970D protein OS=Brassica napus GN=BnaC05g13970D PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 4.8e-10
Identity = 35/50 (70.00%), Postives = 41/50 (82.00%), Query Frame = 2

Query: 38  SSSELHLVLNRLGISCSKEDCQKMINSVDSDGDGNVNFERVLRKMMTDNS 97
           S++ELH VLNRLG+SCS EDC KMI  VD+DGDGNVNFE   +KMMT +S
Sbjct: 109 SAAELHQVLNRLGMSCSVEDCTKMIGPVDADGDGNVNFEE-FQKMMTSSS 157

Query: 98  157
           
Sbjct: 169 157

Query: 158 188
           
Sbjct: 229 157

BLAST of CU173286 vs. NCBI nr
Match: gi|449439129|ref|XP_004137340.1| (PREDICTED: probable calcium-binding protein CML27 [Cucumis sativus])

HSP 1 Score: 99.8 bits (247), Expect = 2.4e-18
Identity = 52/56 (92.86%), Postives = 52/56 (92.86%), Query Frame = 2

Query: 38  SSSELHLVLNRLGISCSKEDCQKMINSVDSDGDGNVNFERVLRKMMTDNSKSKAAQ 97
           S SELHLVLNRLGISCSKEDCQKMINSVDSDGDGNVNFE   RKMMTDNSKSKAAQ
Sbjct: 125 SQSELHLVLNRLGISCSKEDCQKMINSVDSDGDGNVNFEE-FRKMMTDNSKSKAAQ 179

Query: 98  157
           
Sbjct: 185 179

Query: 158 206
           
Sbjct: 245 179

BLAST of CU173286 vs. NCBI nr
Match: gi|659106947|ref|XP_008453475.1| (PREDICTED: probable calcium-binding protein CML27 [Cucumis melo])

HSP 1 Score: 98.2 bits (243), Expect = 6.9e-18
Identity = 51/56 (91.07%), Postives = 52/56 (92.86%), Query Frame = 2

Query: 38  SSSELHLVLNRLGISCSKEDCQKMINSVDSDGDGNVNFERVLRKMMTDNSKSKAAQ 97
           S SELHLVLNRLGISCSKEDCQKMINSVDSDGDGNVNFE   RKMMTDNSKSKAA+
Sbjct: 125 SQSELHLVLNRLGISCSKEDCQKMINSVDSDGDGNVNFEE-FRKMMTDNSKSKAAK 179

Query: 98  157
           
Sbjct: 185 179

Query: 158 206
           
Sbjct: 245 179

BLAST of CU173286 vs. NCBI nr
Match: gi|1009165393|ref|XP_015901010.1| (PREDICTED: probable calcium-binding protein CML27 [Ziziphus jujuba])

HSP 1 Score: 70.5 bits (171), Expect = 1.5e-09
Identity = 35/52 (67.31%), Postives = 42/52 (80.77%), Query Frame = 2

Query: 38  SSSELHLVLNRLGISCSKEDCQKMINSVDSDGDGNVNFERVLRKMMTDNSKS 97
           SS ELHLVLNRLG++CS EDC++MI SVDSDGDGNVNF    +KMMT+   +
Sbjct: 112 SSEELHLVLNRLGMNCSPEDCRRMIRSVDSDGDGNVNFAE-FQKMMTNKGSN 162

Query: 98  157
           
Sbjct: 172 162

Query: 158 194
           
Sbjct: 232 162

BLAST of CU173286 vs. NCBI nr
Match: gi|470127141|ref|XP_004299534.1| (PREDICTED: probable calcium-binding protein CML27 [Fragaria vesca subsp. vesca])

HSP 1 Score: 70.1 bits (170), Expect = 2.0e-09
Identity = 35/54 (64.81%), Postives = 43/54 (79.63%), Query Frame = 2

Query: 38  SSSELHLVLNRLGISCSKEDCQKMINSVDSDGDGNVNFERVLRKMMTDNSKSKA 97
           S+ ELHLVLNRL + CS EDC +MI +VD+DGDGNVNFE   +KMM++NS S A
Sbjct: 110 SAEELHLVLNRLQMKCSVEDCNRMIQTVDADGDGNVNFEE-FKKMMSNNSASNA 162

Query: 98  157
           
Sbjct: 170 162

Query: 158 200
           
Sbjct: 230 162

BLAST of CU173286 vs. NCBI nr
Match: gi|1021495528|ref|XP_016190781.1| (PREDICTED: probable calcium-binding protein CML26 [Arachis ipaensis])

HSP 1 Score: 69.7 bits (169), Expect = 2.6e-09
Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 2

Query: 38  SSSELHLVLNRLGISCSKEDCQKMINSVDSDGDGNVNFERVLRKMMTDN 97
           SS+ELHLVLNRLG+ CS E+C  MI SVDSDGDGNVNFE   ++MM++N
Sbjct: 117 SSAELHLVLNRLGLKCSVEECHNMIKSVDSDGDGNVNFEE-FKQMMSNN 164

Query: 98  157
           
Sbjct: 177 164

Query: 158 185
           
Sbjct: 237 164

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
CML27_ARATH3.3e-1261.90Probable calcium-binding protein CML27 OS=Arabidopsis thaliana GN=CML27 PE=1 SV=... [more]
CML26_ARATH1.1e-1068.09Probable calcium-binding protein CML26 OS=Arabidopsis thaliana GN=CML26 PE=1 SV=... [more]
CML23_ARATH7.6e-0956.00Probable calcium-binding protein CML23 OS=Arabidopsis thaliana GN=CML23 PE=2 SV=... [more]
ALL8_OLEEU2.4e-0758.00Calcium-binding allergen Ole e 8 OS=Olea europaea PE=1 SV=1[more]
CML24_ARATH4.2e-0754.17Calcium-binding protein CML24 OS=Arabidopsis thaliana GN=CML24 PE=2 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0LPP8_CUCSA2.5e-1992.86Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025020 PE=4 SV=1[more]
V4KYC9_EUTSA3.7e-1070.00Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10008945mg PE=4 SV=1[more]
M4EAW5_BRARP4.8e-1070.00Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
A0A0D3CB55_BRAOL4.8e-1070.00Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1[more]
A0A078G1L6_BRANA4.8e-1070.00BnaC05g13970D protein OS=Brassica napus GN=BnaC05g13970D PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449439129|ref|XP_004137340.1|2.4e-1892.86PREDICTED: probable calcium-binding protein CML27 [Cucumis sativus][more]
gi|659106947|ref|XP_008453475.1|6.9e-1891.07PREDICTED: probable calcium-binding protein CML27 [Cucumis melo][more]
gi|1009165393|ref|XP_015901010.1|1.5e-0967.31PREDICTED: probable calcium-binding protein CML27 [Ziziphus jujuba][more]
gi|470127141|ref|XP_004299534.1|2.0e-0964.81PREDICTED: probable calcium-binding protein CML27 [Fragaria vesca subsp. vesca][more]
gi|1021495528|ref|XP_016190781.1|2.6e-0969.39PREDICTED: probable calcium-binding protein CML26 [Arachis ipaensis][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G025020Csa1G025020gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0160328H0160328EST