CU172772 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU172772
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 1486317 .. 1486526 (-)
Sequence length210
The following sequences are available for this feature:

transcribed_cluster sequence

GTGTGGAATTGAATGCTCTCCCACAAAAGCCAGAACTATCTTCTTCATTCAGTTCCATATATGGTGTCAAAAGCCATGGCAAAAGGGGGAAGGCAAGAATCACCGATCAAGTATTGGGGAATGGGTTTTTCATTGTCGAGATTATAAACAGGACCCTTCAGTAATTCACTAGATTTCTCAATTTCTGCATATAGTTTGCTCTGCCGCAAG
BLAST of CU172772 vs. TrEMBL
Match: A0A0A0LFB5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G008700 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 3.6e-14
Identity = 40/41 (97.56%), Postives = 40/41 (97.56%), Query Frame = -2

Query: 87  LRQSKLYAEIEKSSELLKGPVYNLDNEKPIPQYLIGDSCLP 146
           LRQSKLYAEIEKSSELLKGPVYNLDNEKPIPQYLIGDSC P
Sbjct: 275 LRQSKLYAEIEKSSELLKGPVYNLDNEKPIPQYLIGDSCFP 315

Query: 147 206
           
Sbjct: 335 315

Query: 207 210
           
Sbjct: 395 315

BLAST of CU172772 vs. TrEMBL
Match: A0A0A0LFB5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G008700 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.7e-09
Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = -3

Query: 2   FPLLPWLLTPYMELNEEDSSGFCGRAFNST 61
           FPLLPWLLTPYMELNEEDSSGFCGRAFNST
Sbjct: 314 FPLLPWLLTPYMELNEEDSSGFCGRAFNST 343

Query: 62  92
           
Sbjct: 374 343


HSP 2 Score: 58.5 bits (140), Expect = 3.6e-06
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = -2

Query: 87  RQSKLYAEIEKSSELLKGPVYNLDNEKPIPQYLIGDSCLP 146
           RQ+KLY  +E+S +LL GPVY L N K IPQY++GDSC P
Sbjct: 273 RQTKLYLGVEESRDLLNGPVYELGNGKAIPQYILGDSCFP 312

Query: 147 206
           
Sbjct: 333 312

BLAST of CU172772 vs. TrEMBL
Match: M5VQK6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005929mg PE=4 SV=1)

HSP 1 Score: 43.5 bits (101), Expect = 1.2e-01
Identity = 19/29 (65.52%), Postives = 22/29 (75.86%), Query Frame = -3

Query: 5   FPLLPWLLTPYMELNEEDSSGFCGRAFNS 64
           FPLLPWLLTPY+  +E DS G   +AFNS
Sbjct: 311 FPLLPWLLTPYIRSDEADSFGSLEKAFNS 339

Query: 65  92
           
Sbjct: 371 339


HSP 2 Score: 58.5 bits (140), Expect = 3.6e-06
Identity = 26/40 (65.00%), Postives = 31/40 (77.50%), Query Frame = -2

Query: 87  RQSKLYAEIEKSSELLKGPVYNLDNEKPIPQYLIGDSCLP 146
           RQ+KLY+ IE+S ELLKGP YNL N   IPQY++GDS  P
Sbjct: 267 RQTKLYSRIEESRELLKGPCYNLSNGNSIPQYILGDSSFP 306

Query: 147 206
           
Sbjct: 327 306

BLAST of CU172772 vs. TrEMBL
Match: A0A067KEG1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16986 PE=4 SV=1)

HSP 1 Score: 41.6 bits (96), Expect = 4.6e-01
Identity = 19/30 (63.33%), Postives = 21/30 (70.00%), Query Frame = -3

Query: 5   AFPLLPWLLTPYMELNEEDSSGFCGRAFNS 64
           +FPLL WLLTPY+   EEDS G   R FNS
Sbjct: 304 SFPLLNWLLTPYIRPKEEDSFGSAQREFNS 333

Query: 65  95
           
Sbjct: 364 333


HSP 2 Score: 57.4 bits (137), Expect = 8.1e-06
Identity = 25/41 (60.98%), Postives = 31/41 (75.61%), Query Frame = -2

Query: 87  LRQSKLYAEIEKSSELLKGPVYNLDNEKPIPQYLIGDSCLP 146
           LR++KLY E+E+S ELL GP YNL     IPQY++GDSC P
Sbjct: 29  LRETKLYREVEESKELLNGPSYNLSEGCLIPQYILGDSCFP 69

Query: 147 206
           
Sbjct: 89  69

Query: 207 210
           
Sbjct: 149 69

BLAST of CU172772 vs. TrEMBL
Match: A0A0B2Q107_GLYSO (Putative nuclease HARBI1 OS=Glycine soja GN=glysoja_011638 PE=4 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 4.9e-03
Identity = 21/29 (72.41%), Postives = 23/29 (79.31%), Query Frame = -3

Query: 5  FPLLPWLLTPYMELNEEDSSGFCGRAFNS 64
          FPLLPWLLTPY  +NEEDS G   RAFN+
Sbjct: 68 FPLLPWLLTPYNRVNEEDSFGSAERAFNT 96

Query: 65 92
          
Sbjct: 128 96

BLAST of CU172772 vs. NCBI nr
Match: gi|449443271|ref|XP_004139403.1| (PREDICTED: putative nuclease HARBI1 [Cucumis sativus])

HSP 1 Score: 86.3 bits (212), Expect = 2.3e-14
Identity = 40/41 (97.56%), Postives = 40/41 (97.56%), Query Frame = -2

Query: 87  LRQSKLYAEIEKSSELLKGPVYNLDNEKPIPQYLIGDSCLP 146
           LRQSKLYAEIEKSSELLKGPVYNLDNEKPIPQYLIGDSC P
Sbjct: 275 LRQSKLYAEIEKSSELLKGPVYNLDNEKPIPQYLIGDSCFP 315

Query: 147 206
           
Sbjct: 335 315

Query: 207 210
           
Sbjct: 395 315

BLAST of CU172772 vs. NCBI nr
Match: gi|659070933|ref|XP_008457314.1| (PREDICTED: putative nuclease HARBI1 [Cucumis melo])

HSP 1 Score: 83.6 bits (205), Expect = 1.5e-13
Identity = 39/43 (90.70%), Postives = 40/43 (93.02%), Query Frame = -2

Query: 81  LRQSKLYAEIEKSSELLKGPVYNLDNEKPIPQYLIGDSCLPPF 140
           LRQSKLY EIEKSSELLKGPVYNLD+EKPIPQYLIGDSC P F
Sbjct: 274 LRQSKLYEEIEKSSELLKGPVYNLDDEKPIPQYLIGDSCFPLF 316

Query: 141 200
           
Sbjct: 334 316

Query: 201 210
           
Sbjct: 394 316

BLAST of CU172772 vs. NCBI nr
Match: gi|645275650|ref|XP_008242923.1| (PREDICTED: putative nuclease HARBI1 [Prunus mume])

HSP 1 Score: 59.7 bits (143), Expect = 2.3e-06
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = -2

Query: 87  RQSKLYAEIEKSSELLKGPVYNLDNEKPIPQYLIGDSCLP 146
           RQ+KLY  +E+S +LL GPVY L N K IPQY++GDSC P
Sbjct: 273 RQTKLYLGVEESRDLLNGPVYELGNGKAIPQYILGDSCFP 312

Query: 147 206
           
Sbjct: 333 312

BLAST of CU172772 vs. NCBI nr
Match: gi|595803820|ref|XP_007202067.1| (hypothetical protein PRUPE_ppa005929mg [Prunus persica])

HSP 1 Score: 59.7 bits (143), Expect = 2.3e-06
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = -2

Query: 87  RQSKLYAEIEKSSELLKGPVYNLDNEKPIPQYLIGDSCLP 146
           RQ+KLY  +E+S +LL GPVY L N K IPQY++GDSC P
Sbjct: 273 RQTKLYLGVEESRDLLNGPVYELGNGKAIPQYILGDSCFP 312

Query: 147 206
           
Sbjct: 333 312

BLAST of CU172772 vs. NCBI nr
Match: gi|356546142|ref|XP_003541490.1| (PREDICTED: putative nuclease HARBI1 [Glycine max])

HSP 1 Score: 59.7 bits (143), Expect = 2.3e-06
Identity = 26/41 (63.41%), Postives = 31/41 (75.61%), Query Frame = -2

Query: 87  LRQSKLYAEIEKSSELLKGPVYNLDNEKPIPQYLIGDSCLP 146
           LR+SKLY E+E+S ELL GP YNL     IPQY++GDSC P
Sbjct: 274 LRESKLYREVEQSKELLNGPSYNLSEGCLIPQYILGDSCFP 314

Query: 147 206
           
Sbjct: 334 314

Query: 207 210
           
Sbjct: 394 314

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LFB5_CUCSA3.6e-1497.56Uncharacterized protein OS=Cucumis sativus GN=Csa_2G008700 PE=4 SV=1[more]
A0A0A0LFB5_CUCSA2.7e-09100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G008700 PE=4 SV=1[more]
M5VQK6_PRUPE1.2e-0165.52Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005929mg PE=4 SV=1[more]
A0A067KEG1_JATCU4.6e-0163.33Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16986 PE=4 SV=1[more]
A0A0B2Q107_GLYSO4.9e-0372.41Putative nuclease HARBI1 OS=Glycine soja GN=glysoja_011638 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449443271|ref|XP_004139403.1|2.3e-1497.56PREDICTED: putative nuclease HARBI1 [Cucumis sativus][more]
gi|659070933|ref|XP_008457314.1|1.5e-1390.70PREDICTED: putative nuclease HARBI1 [Cucumis melo][more]
gi|645275650|ref|XP_008242923.1|2.3e-0662.50PREDICTED: putative nuclease HARBI1 [Prunus mume][more]
gi|595803820|ref|XP_007202067.1|2.3e-0662.50hypothetical protein PRUPE_ppa005929mg [Prunus persica][more]
gi|356546142|ref|XP_003541490.1|2.3e-0663.41PREDICTED: putative nuclease HARBI1 [Glycine max][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa2G008700Csa2G008700gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0156487H0156487EST