CU168339 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU168339
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionMetalloprotease m41 ftsh, putative isoform 1
LocationChr1 : 27166276 .. 27172806 (-)
Sequence length173
The following sequences are available for this feature:

transcribed_cluster sequence

ATGCTGCTTCCTTTTGGAGAAGAAAATTTCCTATCTTCGTATGAGTTAAAGCAGGCACAAGAGATTGCAACAAGAATGGTGCTTCAGTATGGCTGGAGACCAGATGATAGTCCAGCAATTTACAGCCGAAACAATGCAGTTTCTTTTTGAGTATGGGTGATAACTGTGAATAT
BLAST of CU168339 vs. Swiss-Prot
Match: FTSI5_ARATH (Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=Arabidopsis thaliana GN=FTSHI5 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 5.6e-14
Identity = 37/48 (77.08%), Postives = 39/48 (81.25%), Query Frame = 1

Query: 1    MLLPFGEENFLSSYELKQAQEIATRMVLQYGWRPDDSPAIYSRNNAVS 60
            MLLP G+ENFLSS E+ +AQEIATRMVLQYGW PDDSPA+Y   NAVS
Sbjct: 1170 MLLPPGDENFLSSSEITKAQEIATRMVLQYGWGPDDSPAVYYATNAVS 1217

Query: 61   120
            
Sbjct: 1230 1217

Query: 121  145
            
Sbjct: 1290 1217

BLAST of CU168339 vs. TrEMBL
Match: A0A0A0M0B7_CUCSA (Metalloprotease m41 ftsh OS=Cucumis sativus GN=Csa_1G673510 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.7e-17
Identity = 45/47 (95.74%), Postives = 46/47 (97.87%), Query Frame = 1

Query: 1   MLLPFGEENFLSSYELKQAQEIATRMVLQYGWRPDDSPAIYSRNNAV 60
           MLLPFGEENFLSSYELKQAQEIATRMVLQYGW PDDSPAIYSRNNA+
Sbjct: 96  MLLPFGEENFLSSYELKQAQEIATRMVLQYGWGPDDSPAIYSRNNAI 142

Query: 61  120
           
Sbjct: 156 142

Query: 121 142
           
Sbjct: 216 142

BLAST of CU168339 vs. TrEMBL
Match: A0A059B763_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04217 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 3.0e-14
Identity = 40/48 (83.33%), Postives = 44/48 (91.67%), Query Frame = 1

Query: 1    MLLPFGEENFLSSYELKQAQEIATRMVLQYGWRPDDSPAIYSRNNAVS 60
            +LLPFGEENFLSS ELKQAQEIATRMV+QYGW PDDSPAIY  +NAV+
Sbjct: 982  LLLPFGEENFLSSSELKQAQEIATRMVIQYGWGPDDSPAIYYHSNAVT 1029

Query: 61   120
            
Sbjct: 1042 1029

Query: 121  145
            
Sbjct: 1102 1029

BLAST of CU168339 vs. TrEMBL
Match: A0A059B6H8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04217 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 3.9e-14
Identity = 40/47 (85.11%), Postives = 43/47 (91.49%), Query Frame = 1

Query: 1    MLLPFGEENFLSSYELKQAQEIATRMVLQYGWRPDDSPAIYSRNNAV 60
            +LLPFGEENFLSS ELKQAQEIATRMV+QYGW PDDSPAIY  +NAV
Sbjct: 982  LLLPFGEENFLSSSELKQAQEIATRMVIQYGWGPDDSPAIYYHSNAV 1028

Query: 61   120
            
Sbjct: 1042 1028

Query: 121  142
            
Sbjct: 1102 1028

BLAST of CU168339 vs. TrEMBL
Match: W9RHH7_9ROSA (ATP-dependent zinc metalloprotease FtsH OS=Morus notabilis GN=L484_024479 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 3.9e-14
Identity = 40/48 (83.33%), Postives = 43/48 (89.58%), Query Frame = 1

Query: 1    MLLPFGEENFLSSYELKQAQEIATRMVLQYGWRPDDSPAIYSRNNAVS 60
            MLLPFGEENFLSS ELKQAQEIATRMV+QYGW PDDSPAIY  +NA +
Sbjct: 1153 MLLPFGEENFLSSSELKQAQEIATRMVIQYGWGPDDSPAIYYHSNAAT 1200

Query: 61   120
            
Sbjct: 1213 1200

Query: 121  145
            
Sbjct: 1273 1200

BLAST of CU168339 vs. TrEMBL
Match: A0A067JUT9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23568 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 8.7e-14
Identity = 39/48 (81.25%), Postives = 44/48 (91.67%), Query Frame = 1

Query: 1    MLLPFGEENFLSSYELKQAQEIATRMVLQYGWRPDDSPAIYSRNNAVS 60
            +LLPFGEENFLSS EL+QAQEIATRMV+QYGW PDDSPAIY  +NAV+
Sbjct: 1147 LLLPFGEENFLSSSELRQAQEIATRMVIQYGWGPDDSPAIYYTSNAVT 1194

Query: 61   120
            
Sbjct: 1207 1194

Query: 121  145
            
Sbjct: 1267 1194

BLAST of CU168339 vs. NCBI nr
Match: gi|449449669|ref|XP_004142587.1| (PREDICTED: uncharacterized protein LOC101207174 [Cucumis sativus])

HSP 1 Score: 102.8 bits (255), Expect = 2.0e-19
Identity = 48/49 (97.96%), Postives = 48/49 (97.96%), Query Frame = 1

Query: 1    MLLPFGEENFLSSYELKQAQEIATRMVLQYGWRPDDSPAIYSRNNAVSF 60
            MLLPFGEENFLSSYELKQAQEIATRMVLQYGW PDDSPAIYSRNNAVSF
Sbjct: 1177 MLLPFGEENFLSSYELKQAQEIATRMVLQYGWGPDDSPAIYSRNNAVSF 1225

Query: 61   120
            
Sbjct: 1237 1225

Query: 121  148
            
Sbjct: 1297 1225

BLAST of CU168339 vs. NCBI nr
Match: gi|700211648|gb|KGN66744.1| (Metalloprotease m41 ftsh [Cucumis sativus])

HSP 1 Score: 98.2 bits (243), Expect = 4.9e-18
Identity = 45/47 (95.74%), Postives = 46/47 (97.87%), Query Frame = 1

Query: 1   MLLPFGEENFLSSYELKQAQEIATRMVLQYGWRPDDSPAIYSRNNAV 60
           MLLPFGEENFLSSYELKQAQEIATRMVLQYGW PDDSPAIYSRNNA+
Sbjct: 96  MLLPFGEENFLSSYELKQAQEIATRMVLQYGWGPDDSPAIYSRNNAI 142

Query: 61  120
           
Sbjct: 156 142

Query: 121 142
           
Sbjct: 216 142

BLAST of CU168339 vs. NCBI nr
Match: gi|659086122|ref|XP_008443775.1| (PREDICTED: uncharacterized protein LOC103487285 [Cucumis melo])

HSP 1 Score: 95.1 bits (235), Expect = 4.1e-17
Identity = 44/49 (89.80%), Postives = 45/49 (91.84%), Query Frame = 1

Query: 1    MLLPFGEENFLSSYELKQAQEIATRMVLQYGWRPDDSPAIYSRNNAVSF 60
            MLLPFGEENFLSS ELKQAQEIATRMV+QYGW PDDSPAIY RNNAV F
Sbjct: 1172 MLLPFGEENFLSSSELKQAQEIATRMVIQYGWGPDDSPAIYCRNNAVGF 1220

Query: 61   120
            
Sbjct: 1232 1220

Query: 121  148
            
Sbjct: 1292 1220

BLAST of CU168339 vs. NCBI nr
Match: gi|629095490|gb|KCW61485.1| (hypothetical protein EUGRSUZ_H04217 [Eucalyptus grandis])

HSP 1 Score: 87.4 bits (215), Expect = 8.6e-15
Identity = 40/48 (83.33%), Postives = 44/48 (91.67%), Query Frame = 1

Query: 1    MLLPFGEENFLSSYELKQAQEIATRMVLQYGWRPDDSPAIYSRNNAVS 60
            +LLPFGEENFLSS ELKQAQEIATRMV+QYGW PDDSPAIY  +NAV+
Sbjct: 982  LLLPFGEENFLSSSELKQAQEIATRMVIQYGWGPDDSPAIYYHSNAVT 1029

Query: 61   120
            
Sbjct: 1042 1029

Query: 121  145
            
Sbjct: 1102 1029

BLAST of CU168339 vs. NCBI nr
Match: gi|702447608|ref|XP_010024934.1| (PREDICTED: uncharacterized protein LOC104415355 [Eucalyptus grandis])

HSP 1 Score: 87.4 bits (215), Expect = 8.6e-15
Identity = 40/48 (83.33%), Postives = 44/48 (91.67%), Query Frame = 1

Query: 1    MLLPFGEENFLSSYELKQAQEIATRMVLQYGWRPDDSPAIYSRNNAVS 60
            +LLPFGEENFLSS ELKQAQEIATRMV+QYGW PDDSPAIY  +NAV+
Sbjct: 1149 LLLPFGEENFLSSSELKQAQEIATRMVIQYGWGPDDSPAIYYHSNAVT 1196

Query: 61   120
            
Sbjct: 1209 1196

Query: 121  145
            
Sbjct: 1269 1196

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
FTSI5_ARATH5.6e-1477.08Probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic OS=A... [more]
Match NameE-valueIdentityDescription
A0A0A0M0B7_CUCSA1.7e-1795.74Metalloprotease m41 ftsh OS=Cucumis sativus GN=Csa_1G673510 PE=4 SV=1[more]
A0A059B763_EUCGR3.0e-1483.33Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04217 PE=4 SV=1[more]
A0A059B6H8_EUCGR3.9e-1485.11Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04217 PE=4 SV=1[more]
W9RHH7_9ROSA3.9e-1483.33ATP-dependent zinc metalloprotease FtsH OS=Morus notabilis GN=L484_024479 PE=4 S... [more]
A0A067JUT9_JATCU8.7e-1481.25Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23568 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449449669|ref|XP_004142587.1|2.0e-1997.96PREDICTED: uncharacterized protein LOC101207174 [Cucumis sativus][more]
gi|700211648|gb|KGN66744.1|4.9e-1895.74Metalloprotease m41 ftsh [Cucumis sativus][more]
gi|659086122|ref|XP_008443775.1|4.1e-1789.80PREDICTED: uncharacterized protein LOC103487285 [Cucumis melo][more]
gi|629095490|gb|KCW61485.1|8.6e-1583.33hypothetical protein EUGRSUZ_H04217 [Eucalyptus grandis][more]
gi|702447608|ref|XP_010024934.1|8.6e-1583.33PREDICTED: uncharacterized protein LOC104415355 [Eucalyptus grandis][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G673510Csa1G673510gene
Csa1G668010Csa1G668010gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0119569H0119569EST


Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23076METALLOPROTEASE M41 FTSHcoord: 5..45
score: 2.0
NoneNo IPR availablePANTHERPTHR23076:SF58FTSH EXTRACELLULAR PROTEASE FAMILY PROTEINcoord: 5..45
score: 2.0
NoneNo IPR availableunknownSSF140990FtsH protease domain-likecoord: 5..46
score: 3.0