CU164413 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU164413
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 11495548 .. 11503184 (+)
Sequence length196
The following sequences are available for this feature:

transcribed_cluster sequence

TCCATTGGCACGTCATTAATATCTGGTTTCTCATCTTGAAGCTCCCCCTTGGTTGCTACTGCACCACTTGGTTCAACATCATCTGATTCTAAAGCTTCATCTTCGACATTATCAGTGGCTTCATTTTCTGCAGCCTCTATTTTTTTGTTCCTCTAACACAGCAATCGGCATGTATTTAAATTTTCGGCGAGGAGGC
BLAST of CU164413 vs. TrEMBL
Match: A0A0A0LVV2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G195230 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.4e-15
Identity = 44/49 (89.80%), Postives = 45/49 (91.84%), Query Frame = -3

Query: 3   NKKIEAAENEATDNVEDEALESDDVEPSGAVATKGELQDEKPDINDVPM 62
            +K EAAENEATDNVEDEALESDDVEPS  VATKGELQDEKPDINDVPM
Sbjct: 13  EQKNEAAENEATDNVEDEALESDDVEPSSTVATKGELQDEKPDINDVPM 61

Query: 63  122
           
Sbjct: 73  61

Query: 123 150
           
Sbjct: 133 61

BLAST of CU164413 vs. NCBI nr
Match: gi|700209983|gb|KGN65079.1| (hypothetical protein Csa_1G195230 [Cucumis sativus])

HSP 1 Score: 85.1 bits (209), Expect = 4.8e-14
Identity = 44/49 (89.80%), Postives = 45/49 (91.84%), Query Frame = -3

Query: 3   NKKIEAAENEATDNVEDEALESDDVEPSGAVATKGELQDEKPDINDVPM 62
            +K EAAENEATDNVEDEALESDDVEPS  VATKGELQDEKPDINDVPM
Sbjct: 13  EQKNEAAENEATDNVEDEALESDDVEPSSTVATKGELQDEKPDINDVPM 61

Query: 63  122
           
Sbjct: 73  61

Query: 123 150
           
Sbjct: 133 61

BLAST of CU164413 vs. NCBI nr
Match: gi|449465421|ref|XP_004150426.1| (PREDICTED: uncharacterized protein LOC101221727 isoform X1 [Cucumis sativus])

HSP 1 Score: 85.1 bits (209), Expect = 4.8e-14
Identity = 44/49 (89.80%), Postives = 45/49 (91.84%), Query Frame = -3

Query: 3   NKKIEAAENEATDNVEDEALESDDVEPSGAVATKGELQDEKPDINDVPM 62
            +K EAAENEATDNVEDEALESDDVEPS  VATKGELQDEKPDINDVPM
Sbjct: 121 EQKNEAAENEATDNVEDEALESDDVEPSSTVATKGELQDEKPDINDVPM 169

Query: 63  122
           
Sbjct: 181 169

Query: 123 150
           
Sbjct: 241 169

BLAST of CU164413 vs. NCBI nr
Match: gi|778659850|ref|XP_011655175.1| (PREDICTED: uncharacterized protein LOC101221727 isoform X2 [Cucumis sativus])

HSP 1 Score: 85.1 bits (209), Expect = 4.8e-14
Identity = 44/49 (89.80%), Postives = 45/49 (91.84%), Query Frame = -3

Query: 3   NKKIEAAENEATDNVEDEALESDDVEPSGAVATKGELQDEKPDINDVPM 62
            +K EAAENEATDNVEDEALESDDVEPS  VATKGELQDEKPDINDVPM
Sbjct: 121 EQKNEAAENEATDNVEDEALESDDVEPSSTVATKGELQDEKPDINDVPM 169

Query: 63  122
           
Sbjct: 181 169

Query: 123 150
           
Sbjct: 241 169

BLAST of CU164413 vs. NCBI nr
Match: gi|659118145|ref|XP_008458970.1| (PREDICTED: uncharacterized protein LOC103498224 isoform X2 [Cucumis melo])

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-11
Identity = 39/49 (79.59%), Postives = 44/49 (89.80%), Query Frame = -3

Query: 3   NKKIEAAENEATDNVEDEALESDDVEPSGAVATKGELQDEKPDINDVPM 62
            +K EAAENEA D+VEDEA++S+DVEPS  VATKGELQDEKPDINDVPM
Sbjct: 121 EQKNEAAENEAADDVEDEAIKSNDVEPSSTVATKGELQDEKPDINDVPM 169

Query: 63  122
           
Sbjct: 181 169

Query: 123 150
           
Sbjct: 241 169

BLAST of CU164413 vs. NCBI nr
Match: gi|659118143|ref|XP_008458968.1| (PREDICTED: uncharacterized protein LOC103498224 isoform X1 [Cucumis melo])

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-11
Identity = 39/49 (79.59%), Postives = 44/49 (89.80%), Query Frame = -3

Query: 3   NKKIEAAENEATDNVEDEALESDDVEPSGAVATKGELQDEKPDINDVPM 62
            +K EAAENEA D+VEDEA++S+DVEPS  VATKGELQDEKPDINDVPM
Sbjct: 121 EQKNEAAENEAADDVEDEAIKSNDVEPSSTVATKGELQDEKPDINDVPM 169

Query: 63  122
           
Sbjct: 181 169

Query: 123 150
           
Sbjct: 241 169

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LVV2_CUCSA1.4e-1589.80Uncharacterized protein OS=Cucumis sativus GN=Csa_1G195230 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700209983|gb|KGN65079.1|4.8e-1489.80hypothetical protein Csa_1G195230 [Cucumis sativus][more]
gi|449465421|ref|XP_004150426.1|4.8e-1489.80PREDICTED: uncharacterized protein LOC101221727 isoform X1 [Cucumis sativus][more]
gi|778659850|ref|XP_011655175.1|4.8e-1489.80PREDICTED: uncharacterized protein LOC101221727 isoform X2 [Cucumis sativus][more]
gi|659118145|ref|XP_008458970.1|1.3e-1179.59PREDICTED: uncharacterized protein LOC103498224 isoform X2 [Cucumis melo][more]
gi|659118143|ref|XP_008458968.1|1.3e-1179.59PREDICTED: uncharacterized protein LOC103498224 isoform X1 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G195230Csa1G195230gene
Csa1G195240Csa1G195240gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0081847H0081847EST