CU160843 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU160843
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 8236135 .. 8236348 (+)
Sequence length228
The following sequences are available for this feature:

transcribed_cluster sequence

AAGTCAAGTAGTCATGGGCCACCACCGGAACAACAGCTTGTGAGGTTCAGAAGCCAGAGGATTCTGTCGTGCTTGACTGGCCATTAAAATTTGTAAGGGCTTATTCTTCCAAACTTAAGATTAATGGATGTGTACAGCATAATTATTAATCATCTTCAAACCATACTTGATGTTGATAACTACTTACAAAAGCTTCTGCTTTAATTCAAATTTTTGTGTCTTTTTTCG
BLAST of CU160843 vs. TrEMBL
Match: A0A0A0LL24_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123040 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.6e-07
Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 1

Query: 1   KSSSHGPPPEQQLVRFRSQRILSCLTGH 60
           KSSSHGPPPEQQLVRFRSQRILSCLTGH
Sbjct: 83  KSSSHGPPPEQQLVRFRSQRILSCLTGH 110

Query: 61  85
           
Sbjct: 143 110

BLAST of CU160843 vs. NCBI nr
Match: gi|449442349|ref|XP_004138944.1| (PREDICTED: uncharacterized protein LOC101210346 [Cucumis sativus])

HSP 1 Score: 63.5 bits (153), Expect = 1.8e-07
Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 1

Query: 1   KSSSHGPPPEQQLVRFRSQRILSCLTGH 60
           KSSSHGPPPEQQLVRFRSQRILSCLTGH
Sbjct: 83  KSSSHGPPPEQQLVRFRSQRILSCLTGH 110

Query: 61  85
           
Sbjct: 143 110

BLAST of CU160843 vs. NCBI nr
Match: gi|659082088|ref|XP_008441665.1| (PREDICTED: uncharacterized protein LOC103485749 [Cucumis melo])

HSP 1 Score: 58.5 bits (140), Expect = 5.7e-06
Identity = 26/28 (92.86%), Postives = 26/28 (92.86%), Query Frame = 1

Query: 1   KSSSHGPPPEQQLVRFRSQRILSCLTGH 60
           KS SHG PPEQQLVRFRSQRILSCLTGH
Sbjct: 83  KSRSHGQPPEQQLVRFRSQRILSCLTGH 110

Query: 61  85
           
Sbjct: 143 110

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LL24_CUCSA3.6e-07100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G123040 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449442349|ref|XP_004138944.1|1.8e-07100.00PREDICTED: uncharacterized protein LOC101210346 [Cucumis sativus][more]
gi|659082088|ref|XP_008441665.1|5.7e-0692.86PREDICTED: uncharacterized protein LOC103485749 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa2G123040Csa2G123040gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0044045H0044045EST