CU157171 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU157171
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 9893135 .. 9893370 (-)
Sequence length237
The following sequences are available for this feature:

transcribed_cluster sequence

GAAGAACTTCGACTCTTGACCGAAGCTACATTACTATCGCTCGTAGAAATTAGGAGAGCCAGGCCGCTTTAGGCCATAGTGCATTGGGTTTCTTTTGATATTGGAAAATGCGTGGGGAACTCTCGACTTTTGGCTGAAGCCACATTACAATTGCACGTAGAAAGTAGGAGAGACGAGCCGTTTCGGGCCAGAATGAGTCAAGTTCATTTCGTGTCAGAATACTACTTTAAGAACTCT
BLAST of CU157171 vs. TrEMBL
Match: A0A0A0K4I4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G279800 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 9.8e-16
Identity = 48/67 (71.64%), Postives = 51/67 (76.12%), Query Frame = 1

Query: 52  RRARPL*AIVHWVS-----------FDIGKCVGNSRLLAEATLQLHVESRRDEPFRARMS 111
           +RA+P  A + W S           FDIGKCVGNSRLLAEATLQLHVESRRDEPFRARMS
Sbjct: 74  KRAKPFQARMRWESQAALGHSALGFFDIGKCVGNSRLLAEATLQLHVESRRDEPFRARMS 133

Query: 112 QVHFVSE 171
           QVHFVSE
Sbjct: 134 QVHFVSE 140

Query: 172 220
           
Sbjct: 194 140

BLAST of CU157171 vs. TrEMBL
Match: A0A0A0K4I4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G279800 PE=4 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 1.6e-02
Identity = 35/87 (40.23%), Postives = 35/87 (40.23%), Query Frame = 1

Query: 106 KCVGNSRLLAEATLQ--------------------------------------------- 165
           K  GNSRLLAEA LQ                                             
Sbjct: 54  KLRGNSRLLAEAILQLPVERKRAKPFQARMRWESQAALGHSALGFFDIGKCVGNSRLLAE 113

Query: 166 ----LHVESRRDEPFRARMSQVHFVSE 220
               LHVESRRDEPFRARMSQVHFVSE
Sbjct: 114 ATLQLHVESRRDEPFRARMSQVHFVSE 140


HSP 2 Score: 33.1 bits (74), Expect = 1.8e+02
Identity = 16/19 (84.21%), Postives = 16/19 (84.21%), Query Frame = 3

Query: 39 ARRN*ESQAALGHSALGFF 96
          AR   ESQAALGHSALGFF
Sbjct: 81 ARMRWESQAALGHSALGFF 99


HSP 3 Score: 73.2 bits (178), Expect = 1.6e-10
Identity = 44/85 (51.76%), Postives = 52/85 (61.18%), Query Frame = -3

Query: 8   SSILTRNELDSFWPETARLSYFLRAIVMWLQP----------KVESS--PRIFQYQKKPN 67
           + +L   E D+ WP+ A LSYFLRAIV+ L P           +ES   P      K+P+
Sbjct: 475 TKVLIPKEPDALWPKAAWLSYFLRAIVIGLAPLFSTGDCIGASIESREFPTKVLIPKEPD 534

Query: 68  ALWPKAAWLS*FLRAIVM*LRSRVE 127
           ALWPKAAWLS FLRAIVM LR RVE
Sbjct: 535 ALWPKAAWLSYFLRAIVMWLRPRVE 559

Query: 128 187
           
Sbjct: 595 559

Query: 188 227
           
Sbjct: 655 559

BLAST of CU157171 vs. TrEMBL
Match: A0A0A0K4J2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G279850 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 5.2e-09
Identity = 41/105 (39.05%), Postives = 50/105 (47.62%), Query Frame = -3

Query: 8   SSILTRNELDSFWPETARLSYFLRAIVMWLQPKVESSPRIFQYQKKP------------- 67
           + +L   E D+ WP+ A LSYFLRAIVMWL+P+VESSP+       P             
Sbjct: 525 TKVLIPKEPDALWPKAAWLSYFLRAIVMWLRPRVESSPQKNPIHSSPKRLGSTIFYGGLY 584

Query: 68  -------------------NALWPKAAWLS*FLRAIVM*LRSRVE 127
                              N  WPKA WL  FLR IV+ L S+VE
Sbjct: 585 WGFYRKSRVPHAVFVPKELNEFWPKADWLPYFLRGIVLGLLSKVE 629

Query: 128 187
           
Sbjct: 645 629

Query: 188 227
           
Sbjct: 705 629


HSP 2 Score: 59.3 bits (142), Expect = 2.4e-06
Identity = 37/79 (46.84%), Postives = 45/79 (56.96%), Query Frame = -3

Query: 8   ELDSFWPETARLSYFLRAIVMWLQPKVESSPRIFQYQKKPNALW-------------PKA 67
           +L +FW E + LSYFLRAIV+WL  KV+  PR    +  P+A W             PKA
Sbjct: 64  KLYAFWLEASWLSYFLRAIVLWLLSKVKIFPRSSDIE-GPDAFWHEAIWLSYFLRVIPKA 123

Query: 68  AWLS*FLRAIVM*LRSRVE 127
           AW S FLRAI M LR R +
Sbjct: 124 AWHSYFLRAIFMWLRPRAQ 141

Query: 128 187
           
Sbjct: 184 141

Query: 188 206
           
Sbjct: 244 141


HSP 3 Score: 51.2 bits (121), Expect = 6.5e-04
Identity = 40/107 (37.38%), Postives = 48/107 (44.86%), Query Frame = -2

Query: 9   ILARNGSSLLLSTCNCNVASAKSREFPTH------------------------------- 68
           ILA +G +LLLST +CNVAS KSREFPT                                
Sbjct: 270 ILAHSGFALLLSTGDCNVASTKSREFPTKVLIPKEPDALWPKAAWLSYFLRAIFMWLRPR 329

Query: 69  --FPISKE------------TQCTMA*SGLALLISTSDSNVASVKSR 128
             +   +E            T+C +A SG ALL+STSD  VAS KSR
Sbjct: 330 GDYGFRRESEVPDAGSSIDATRCILAHSGFALLLSTSDFYVASAKSR 376

Query: 129 188
           
Sbjct: 390 376

Query: 189 195
           
Sbjct: 450 376


HSP 4 Score: 50.4 bits (119), Expect = 1.1e-03
Identity = 38/97 (39.18%), Postives = 44/97 (45.36%), Query Frame = -3

Query: 8   PETARLSYFLRAIVMWLQPKVESSPRIFQYQKKP-------------NALW--------- 67
           P+ A  SYFLRAI MWL+P+ +SS RIF Y+K P               LW         
Sbjct: 120 PKAAWHSYFLRAIFMWLRPRAQSSTRIFLYRKNPMHSCPKQHVSPFYGRLWLRLRVESFL 179

Query: 68  --------------PKAAWLS-*FLRAIVM*LRSRVE 127
                         P A W +  FLRAIVM LR RVE
Sbjct: 180 YSQEFPTKVLIPKEPDALWPNYFFLRAIVMWLRPRVE 216

Query: 128 187
           
Sbjct: 240 216


HSP 5 Score: 50.1 bits (118), Expect = 1.5e-03
Identity = 35/74 (47.30%), Postives = 40/74 (54.05%), Query Frame = -2

Query: 9   ILARNGSSLLLSTCNCNVASAKSREFPTHFPISKETQCTMA*S------------GLALL 68
           ILA  G +LLLST +CNVAS KSREFPT   I KE       +            GLA L
Sbjct: 448 ILAWIGFALLLSTSDCNVASTKSREFPTKVLIPKEPDALWPKAAWLSYFLRAIVIGLAPL 507

Query: 69  ISTSDSNVASVKSR 128
            ST D   AS++SR
Sbjct: 508 FSTGDCIGASIESR 521

Query: 129 188
           
Sbjct: 568 521

Query: 189 195
           
Sbjct: 628 521


HSP 6 Score: 44.7 bits (104), Expect = 6.1e-02
Identity = 21/39 (53.85%), Postives = 27/39 (69.23%), Query Frame = -3

Query: 110 SSILTRNELDSFWPETARLSYFLRAIVMWLQPKVESSPR 169
           + +L   E D+ WP      +FLRAIVMWL+P+VESSPR
Sbjct: 186 TKVLIPKEPDALWPNY----FFLRAIVMWLRPRVESSPR 220

Query: 170 227
           
Sbjct: 246 220


HSP 7 Score: 43.5 bits (101), Expect = 1.4e-01
Identity = 18/33 (54.55%), Postives = 24/33 (72.73%), Query Frame = -3

Query: 128 SSILTRNELDSFWPETARLSYFLRAIVMWLQPK 187
           + +L   E D+ WP+ A LSYFLRAI MWL+P+
Sbjct: 297 TKVLIPKEPDALWPKAAWLSYFLRAIFMWLRPR 329

Query: 188 227
           
Sbjct: 357 329


HSP 8 Score: 42.4 bits (98), Expect = 3.0e-01
Identity = 28/62 (45.16%), Postives = 34/62 (54.84%), Query Frame = -2

Query: 9   ILARNGSSLLLSTCNCNVASAKSREFPTHFPISKETQCTMA*SGLALLISTSDSNVASVK 68
           I AR+G  LLLS    +    +  E P        T+C +A SG ALL+ST D NVAS K
Sbjct: 234 IQARSGLDLLLS--KGDYGFRRESEVPDAGSSIDATRCILAHSGFALLLSTGDCNVASTK 293

Query: 69  SR 128
           SR
Sbjct: 294 SR 293

Query: 129 188
           
Sbjct: 354 293

Query: 189 195
           
Sbjct: 414 293


HSP 9 Score: 41.6 bits (96), Expect = 5.2e-01
Identity = 20/40 (50.00%), Postives = 25/40 (62.50%), Query Frame = -3

Query: 104 SILTRNELDSFWPETARLSYFLRAIVMWLQPKVESSPRIF 163
           ++    EL+ FWP+   L YFLR IV+ L  KVESSP  F
Sbjct: 596 AVFVPKELNEFWPKADWLPYFLRGIVLGLLSKVESSPCSF 635

Query: 164 223
           
Sbjct: 656 635


HSP 10 Score: 40.8 bits (94), Expect = 8.8e-01
Identity = 22/35 (62.86%), Postives = 26/35 (74.29%), Query Frame = -2

Query: 90  ILARNGSSLLLSTCNCNVASAKSREFPTHFPISKE 149
           ILA +G +LLLST +  VASAKSREFP  F I K+
Sbjct: 353 ILAHSGFALLLSTSDFYVASAKSREFPMQFLIPKK 387

Query: 150 195
           
Sbjct: 413 387


HSP 11 Score: 35.0 bits (79), Expect = 4.8e+01
Identity = 26/56 (46.43%), Postives = 32/56 (57.14%), Query Frame = -2

Query: 9   SSLLLSTCNCNVASAKSREFPTHFPISKETQCTMA*SGLALLISTSDSNVASVKSR 68
           S L L    C+    +SR   T F I + T+  +A  G ALL+STSD NVAS KSR
Sbjct: 418 SPLFLGQLYCSFRR-ESRVLHTSFNI-EGTRHILAWIGFALLLSTSDCNVASTKSR 471

Query: 69  128
           
Sbjct: 478 471

Query: 129 177
           
Sbjct: 538 471

BLAST of CU157171 vs. NCBI nr
Match: gi|700189165|gb|KGN44398.1| (hypothetical protein Csa_7G279800 [Cucumis sativus])

HSP 1 Score: 92.8 bits (229), Expect = 2.8e-16
Identity = 48/67 (71.64%), Postives = 51/67 (76.12%), Query Frame = 1

Query: 52  RRARPL*AIVHWVS-----------FDIGKCVGNSRLLAEATLQLHVESRRDEPFRARMS 111
           +RA+P  A + W S           FDIGKCVGNSRLLAEATLQLHVESRRDEPFRARMS
Sbjct: 74  KRAKPFQARMRWESQAALGHSALGFFDIGKCVGNSRLLAEATLQLHVESRRDEPFRARMS 133

Query: 112 QVHFVSE 171
           QVHFVSE
Sbjct: 134 QVHFVSE 140

Query: 172 220
           
Sbjct: 194 140

BLAST of CU157171 vs. NCBI nr
Match: gi|700189170|gb|KGN44403.1| (hypothetical protein Csa_7G279850 [Cucumis sativus])

HSP 1 Score: 75.9 bits (185), Expect = 3.6e-11
Identity = 44/85 (51.76%), Postives = 52/85 (61.18%), Query Frame = -3

Query: 8   SSILTRNELDSFWPETARLSYFLRAIVMWLQP----------KVESS--PRIFQYQKKPN 67
           + +L   E D+ WP+ A LSYFLRAIV+ L P           +ES   P      K+P+
Sbjct: 475 TKVLIPKEPDALWPKAAWLSYFLRAIVIGLAPLFSTGDCIGASIESREFPTKVLIPKEPD 534

Query: 68  ALWPKAAWLS*FLRAIVM*LRSRVE 127
           ALWPKAAWLS FLRAIVM LR RVE
Sbjct: 535 ALWPKAAWLSYFLRAIVMWLRPRVE 559

Query: 128 187
           
Sbjct: 595 559

Query: 188 227
           
Sbjct: 655 559

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K4I4_CUCSA9.8e-1671.64Uncharacterized protein OS=Cucumis sativus GN=Csa_7G279800 PE=4 SV=1[more]
A0A0A0K4I4_CUCSA1.6e-0240.23Uncharacterized protein OS=Cucumis sativus GN=Csa_7G279800 PE=4 SV=1[more]
A0A0A0K4J2_CUCSA5.2e-0939.05Uncharacterized protein OS=Cucumis sativus GN=Csa_7G279850 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700189165|gb|KGN44398.1|2.8e-1671.64hypothetical protein Csa_7G279800 [Cucumis sativus][more]
gi|700189170|gb|KGN44403.1|3.6e-1151.76hypothetical protein Csa_7G279850 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa7G279800Csa7G279800gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0006478H0006478EST