CU154727 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU154727
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionMultidrug resistance pump, putative
LocationChr1 : 26447994 .. 26448302 (+)
Sequence length199
The following sequences are available for this feature:

transcribed_cluster sequence

GTGCCAATGTTGGTCTAGTAAATGAACGTCAGTTCAACTTCATCCAGCTCAAAAGGGCTGTATATCAAATGCGTGAACTGAGCCCCTTCAAAAAAAGATGCCACTCATAATTTTGCATAAAAGCGCATCACTGACGGTCCTGCACGGAATCCTAATAATATGAAATTAATAGAGACATAGGAAAAATTGTGGTGCACTC
Library categoryESTs
gynoecious flower library1
BLAST of CU154727 vs. TrEMBL
Match: A0A0A0M056_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G659060 PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 4.0e-07
Identity = 30/31 (96.77%), Postives = 30/31 (96.77%), Query Frame = 3

Query: 3  ANVGLVNERQFNFIQLKRAVYQMRELSPFKK 62
          ANVGLVNERQFNFIQLKRAVYQMRELSP KK
Sbjct: 34 ANVGLVNERQFNFIQLKRAVYQMRELSPSKK 64

Query: 63 96
          
Sbjct: 94 64

BLAST of CU154727 vs. NCBI nr
Match: gi|700211588|gb|KGN66684.1| (hypothetical protein Csa_1G659060 [Cucumis sativus])

HSP 1 Score: 62.4 bits (150), Expect = 3.4e-07
Identity = 30/31 (96.77%), Postives = 30/31 (96.77%), Query Frame = 3

Query: 3  ANVGLVNERQFNFIQLKRAVYQMRELSPFKK 62
          ANVGLVNERQFNFIQLKRAVYQMRELSP KK
Sbjct: 34 ANVGLVNERQFNFIQLKRAVYQMRELSPSKK 64

Query: 63 96
          
Sbjct: 94 64

BLAST of CU154727 vs. NCBI nr
Match: gi|449449619|ref|XP_004142562.1| (PREDICTED: proteinaceous RNase P 1, chloroplastic/mitochondrial [Cucumis sativus])

HSP 1 Score: 62.4 bits (150), Expect = 3.4e-07
Identity = 30/31 (96.77%), Postives = 30/31 (96.77%), Query Frame = 3

Query: 3   ANVGLVNERQFNFIQLKRAVYQMRELSPFKK 62
           ANVGLVNERQFNFIQLKRAVYQMRELSP KK
Sbjct: 412 ANVGLVNERQFNFIQLKRAVYQMRELSPSKK 442

Query: 63  96
           
Sbjct: 472 442

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0M056_CUCSA4.0e-0796.77Uncharacterized protein OS=Cucumis sativus GN=Csa_1G659060 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700211588|gb|KGN66684.1|3.4e-0796.77hypothetical protein Csa_1G659060 [Cucumis sativus][more]
gi|449449619|ref|XP_004142562.1|3.4e-0796.77PREDICTED: proteinaceous RNase P 1, chloroplastic/mitochondrial [Cucumis sativus... [more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G659060Csa1G659060gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0208688G0208688EST