CU152478 (transcribed_cluster) Cucumber (Chinese Long) v2

Overview
NameCU152478
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 1007586 .. 1007752 (+)
Sequence length168
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

GACACACCCTTTCCCAGAAAATGACCACCAATCTACTCATCTTTCGCCCTATCAGAATCCAACCATCTGCCACCTCTGGCTCCAGCTCCGGTCAACCGAAAACCTATATCCATACCCTGTCGCCACGGTTGGCCTCAATGGAGACTTGACCCACCAGACTACATCGGT
Library
Library categoryESTs
gynoecious flower library1
Homology
[Close]
BLAST of CU152478 vs. TrEMBL
Match: A0A0A0LI01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G006010 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.6e-07
Identity = 24/25 (96.00%), Postives = 25/25 (100.00%), Query Frame = 1 

Query: 94  NRKPISIPCRHGWPQWRLDPPDYIG 153
           +RKPISIPCRHGWPQWRLDPPDYIG
Sbjct: 25  HRKPISIPCRHGWPQWRLDPPDYIG 49

Query: 154  169
           
Sbjct: 85   49

[Close]
BLAST of CU152478 vs. TrEMBL
Match: A0A0A0LI01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G006010 PE=4 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 6.0e-04
Identity = 25/27 (92.59%), Postives = 25/27 (92.59%), Query Frame = 3 

Query: 21  MTTNLLIFRPIRIQPSATSGSSSGQPK 80
           MTTNLLIFRPIRIQPSATSGSSSG  K
Sbjct: 1   MTTNLLIFRPIRIQPSATSGSSSGHRK 27

Query: 81   102
           
Sbjct: 61   27

[Close]
BLAST of CU152478 vs. NCBI nr
Match: gi|700205535|gb|KGN60654.1| (hypothetical protein Csa_2G006010 [Cucumis sativus])

HSP 1 Score: 63.9 bits (154), Expect = 1.0e-07
Identity = 24/25 (96.00%), Postives = 25/25 (100.00%), Query Frame = 1 

Query: 94  NRKPISIPCRHGWPQWRLDPPDYIG 153
           +RKPISIPCRHGWPQWRLDPPDYIG
Sbjct: 25  HRKPISIPCRHGWPQWRLDPPDYIG 49

Query: 154  169
           
Sbjct: 85   49

The following BLAST results are available for this feature:
BLAST of CU152478 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LI01_CUCSA1.6e-0796.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G006010 PE=4 SV=1[more]
A0A0A0LI01_CUCSA6.0e-0492.59Uncharacterized protein OS=Cucumis sativus GN=Csa_2G006010 PE=4 SV=1[more]
BLAST of CU152478 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700205535|gb|KGN60654.1|1.0e-0796.00hypothetical protein Csa_2G006010 [Cucumis sativus][more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa2G006010Csa2G006010gene
Csa2G006000Csa2G006000gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0192388G0192388EST