CU150290 (transcribed_cluster) Cucumber (Chinese Long) v2

BLAST of CU150290 vs. Swiss-Prot
Match: PP127_ARATH (Putative pentatricopeptide repeat-containing protein At1g77010, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E5 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 7.4e-07
Identity = 24/47 (51.06%), Postives = 31/47 (65.96%), Query Frame = -3

Query: 33  GLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY 92
           GL SD  VS+SLI LYCK G +E   +VF++M+  D   W+SM++GY
Sbjct: 480 GLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGY 526

Query: 93   152
           
Sbjct: 540  526

Query: 153  174
           
Sbjct: 600  526

HSP 2 Score: 31.6 bits (70), Expect = 4.0e+00
Identity = 14/46 (30.43%), Postives = 25/46 (54.35%), Query Frame = -3

Query: 33  LASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY 92
           L+S   V+  L+ +Y + G +  A  +F+ M  R+  +W++M+ GY
Sbjct: 58  LSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGY 103

Query: 93   152
           
Sbjct: 118  103

Query: 153  171
           
Sbjct: 178  103

HSP 3 Score: 31.2 bits (69), Expect = 5.2e+00
Identity = 17/50 (34.00%), Postives = 26/50 (52.00%), Query Frame = -3

Query: 24  GLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYRPC 83
           GL  D  V+++L+ +Y K GS  +A K+F+ +   D    +SM+  Y  C
Sbjct: 348 GLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSC 397

Query: 84   143
           
Sbjct: 408  397

Query: 144  174
           
Sbjct: 468  397

BLAST of CU150290 vs. Swiss-Prot
Match: PP219_ARATH (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.3e-06
Identity = 21/52 (40.38%), Postives = 35/52 (67.31%), Query Frame = -3

Query: 33  FIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY 92
           ++++  +  +S V T+L++LY K G +EKA  VF+SM+ +D+  WS+M+ GY
Sbjct: 237 YMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGY 288

Query: 93   152
           
Sbjct: 297  288

Query: 153  189
           
Sbjct: 357  288

BLAST of CU150290 vs. Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 2.8e-06
Identity = 21/52 (40.38%), Postives = 36/52 (69.23%), Query Frame = -3

Query: 36  AFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNG 95
           ++I++ G+  +  V+++LIH+Y K G +EK+ +VFNS+  RD+  WS+M+ G
Sbjct: 389 SYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGG 440

Query: 96   155
           
Sbjct: 449  440

Query: 156  192
           
Sbjct: 509  440

HSP 2 Score: 45.1 bits (105), Expect = 3.5e-04
Identity = 19/49 (38.78%), Postives = 30/49 (61.22%), Query Frame = -3

Query: 33  QDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY 92
           +  + SD  V+ SLIH Y   G ++ A KVF ++  +D+ +W+SM+NG+
Sbjct: 159 KSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGF 207

Query: 93   152
           
Sbjct: 219  207

Query: 153  180
           
Sbjct: 279  207

HSP 3 Score: 43.1 bits (100), Expect = 1.3e-03
Identity = 17/63 (26.98%), Postives = 40/63 (63.49%), Query Frame = -3

Query: 3   AFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYRPCMGWE 62
           ++I+++ +  +  ++ +++ +Y K GSIE A+++F++M  +D   W++M++GY     +E
Sbjct: 256 SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYE 315

Query: 63  KRR 122
             R
Sbjct: 316 AAR 318

Query: 123  182
           
Sbjct: 376  318

Query: 183  192
           
Sbjct: 436  318

BLAST of CU150290 vs. Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 4.8e-06
Identity = 21/47 (44.68%), Postives = 33/47 (70.21%), Query Frame = -3

Query: 33  GLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY 92
           G+ + S + TSLI +Y K G IE A +VFNS++H+ L++W++M+ G+
Sbjct: 399 GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGF 445

Query: 93   152
           
Sbjct: 459  445

Query: 153  174
           
Sbjct: 519  445

HSP 2 Score: 42.0 bits (97), Expect = 2.9e-03
Identity = 19/47 (40.43%), Postives = 29/47 (61.70%), Query Frame = -3

Query: 33  GLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY 92
           G   D  V TSLI +Y + G +E A KVF+   HRD+ ++++++ GY
Sbjct: 164 GCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGY 210

Query: 93   152
           
Sbjct: 224  210

Query: 153  174
           
Sbjct: 284  210

HSP 3 Score: 39.7 bits (91), Expect = 1.5e-02
Identity = 16/52 (30.77%), Postives = 30/52 (57.69%), Query Frame = -3

Query: 33  FIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY 92
           +I   G  S+ ++  +LI LY K G +E A  +F  + ++D+ +W++++ GY
Sbjct: 291 WIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGY 342

Query: 93   152
           
Sbjct: 351  342

Query: 153  189
           
Sbjct: 411  342

BLAST of CU150290 vs. Swiss-Prot
Match: PPR85_ARATH (Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=PCMP-H51 PE=2 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 6.3e-06
Identity = 23/46 (50.00%), Postives = 30/46 (65.22%), Query Frame = -3

Query: 33  LASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY 92
           +A D  V  SLI +YCK GS+  AE+VF  M  RDLA+W++M+ G+
Sbjct: 285 VAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGF 330

Query: 93   152
           
Sbjct: 345  330

Query: 153  171
           
Sbjct: 405  330

HSP 2 Score: 43.1 bits (100), Expect = 1.3e-03
Identity = 20/49 (40.82%), Postives = 27/49 (55.10%), Query Frame = -3

Query: 39  IQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMN 98
           I + G   D  V+  LIHLY   G ++ A KVF+ M  R L +W+SM++
Sbjct: 177 IVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMID 225

Query: 99   158
           
Sbjct: 237  225

Query: 159  186
           
Sbjct: 297  225

BLAST of CU150290 vs. TrEMBL
Match: A0A0A0LT91_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043310 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 3.3e-22
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = -3

Query: 33  EAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY 92
           EAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY
Sbjct: 381 EAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY 434

Query: 93   152
           
Sbjct: 441  434

Query: 153  195
           
Sbjct: 501  434

BLAST of CU150290 vs. TrEMBL
Match: A0A0A0LT91_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043310 PE=4 SV=1)

HSP 1 Score: 39.7 bits (91), Expect = 1.6e+00
Identity = 17/47 (36.17%), Postives = 28/47 (59.57%), Query Frame = -3

Query: 33  GLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY 92
           G  SD  V TSL+ +Y KF ++  + +VF+    R + +W+SM+  Y
Sbjct: 83  GFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAY 129

Query: 93   152
           
Sbjct: 143  129

Query: 153  174
           
Sbjct: 203  129

HSP 2 Score: 77.0 bits (188), Expect = 9.1e-12
Identity = 33/54 (61.11%), Postives = 45/54 (83.33%), Query Frame = -3

Query: 33  EAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY 92
           E +++ +GLAS+ QV TSLIH+YCK G I+KAE+VF  ++H+DLA WSSM+NGY
Sbjct: 377 EHYVKLNGLASNQQVQTSLIHMYCKCGRIDKAEEVFAGVLHKDLAVWSSMINGY 430

Query: 93   152
           
Sbjct: 437  430

Query: 153  195
           
Sbjct: 497  430

BLAST of CU150290 vs. TrEMBL
Match: A0A0D2RDY6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G014400 PE=4 SV=1)

HSP 1 Score: 43.1 bits (100), Expect = 1.5e-01
Identity = 19/56 (33.93%), Postives = 31/56 (55.36%), Query Frame = -3

Query: 24  AFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYRPC 83
           A + Q G   D  V TSL+ +Y K   +  A  VF+ M+ R++  W++M++ Y  C
Sbjct: 76  AHVLQLGFQQDIFVQTSLLDMYSKCSDLASARNVFDEMVMRNVVCWNTMISAYCRC 131

Query: 84   143
           
Sbjct: 136  131

Query: 144  192
           
Sbjct: 196  131

HSP 2 Score: 38.1 bits (87), Expect = 4.7e+00
Identity = 12/40 (30.00%), Postives = 29/40 (72.50%), Query Frame = -3

Query: 33  VSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY 92
           ++ S++++Y KFG I+ A  +F+++  R + +W++++ GY
Sbjct: 188 LANSVVNMYVKFGLIDDARSIFDTVDERSILSWTTIIGGY 227

Query: 93   152
           
Sbjct: 248  227

HSP 3 Score: 76.3 bits (186), Expect = 1.6e-11
Identity = 33/54 (61.11%), Postives = 45/54 (83.33%), Query Frame = -3

Query: 33  EAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY 92
           E +++ +GLAS+ QV TSLIH+YCK G +EKAE+VF  ++H+DLA WSSM+NGY
Sbjct: 374 EHYVKINGLASNRQVQTSLIHMYCKCGIVEKAEEVFVEVLHKDLAVWSSMINGY 427

Query: 93   152
           
Sbjct: 434  427

Query: 153  195
           
Sbjct: 494  427

BLAST of CU150290 vs. TrEMBL
Match: A0A061F704_THECC (Pentatricopeptide repeat superfamily protein, putative OS=Theobroma cacao GN=TCM_031344 PE=4 SV=1)

HSP 1 Score: 39.7 bits (91), Expect = 1.6e+00
Identity = 16/46 (34.78%), Postives = 30/46 (65.22%), Query Frame = -3

Query: 33  LASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY 92
           L  +  ++ SL+++Y KFG I  A  VF++M  R + +W++++ GY
Sbjct: 179 LQCEIPLANSLMNMYVKFGFINGARSVFDTMDERSILSWTTIIGGY 224

Query: 93   152
           
Sbjct: 239  224

Query: 153  171
           
Sbjct: 299  224

HSP 2 Score: 68.2 bits (165), Expect = 4.2e-09
Identity = 31/54 (57.41%), Postives = 41/54 (75.93%), Query Frame = -3

Query: 33  EAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY 92
           E +I  +GL S  QV TSLIH++C+ GS+EKA+ VF  +  +DLAAWSSM+NGY
Sbjct: 372 EEYILANGLHSSVQVQTSLIHMFCRCGSLEKAKAVFERLATKDLAAWSSMINGY 425

Query: 93   152
           
Sbjct: 432  425

Query: 153  195
           
Sbjct: 492  425

BLAST of CU150290 vs. TrEMBL
Match: B9SI50_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_0612730 PE=4 SV=1)

HSP 1 Score: 37.4 bits (85), Expect = 8.0e+00
Identity = 13/44 (29.55%), Postives = 29/44 (65.91%), Query Frame = -3

Query: 33  SDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY 92
           SD  ++ +L+++Y K G + +A  +F+ M  + L +W++++ GY
Sbjct: 181 SDIPLTNALLNMYVKHGQVHEARTLFDMMHEKSLISWTTVIGGY 224

Query: 93   152
           
Sbjct: 241  224

Query: 153  165
           
Sbjct: 301  224

HSP 2 Score: 32.0 bits (71), Expect = 3.4e+02
Identity = 13/40 (32.50%), Postives = 24/40 (60.00%), Query Frame = -3

Query: 33  VSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY 92
           V T+L+ +Y K   +  + KVF+ M  R   +W+S+++ Y
Sbjct: 86  VMTTLLDMYSKCYDLASSRKVFDEMPMRSTVSWNSIISAY 125

Query: 93   152
           
Sbjct: 146  125

HSP 3 Score: 64.3 bits (155), Expect = 6.1e-08
Identity = 28/47 (59.57%), Postives = 38/47 (80.85%), Query Frame = -3

Query: 33  GLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY 92
           GL SD +V+T LI +YCKFGSI+ A K+F+ + +RDLA WS+M+NGY
Sbjct: 385 GLHSDLRVATGLIDMYCKFGSIKLARKIFDGVSNRDLAVWSAMINGY 431

Query: 93   152
           
Sbjct: 445  431

Query: 153  174
           
Sbjct: 505  431

BLAST of CU150290 vs. NCBI nr
Match: gi|449439735|ref|XP_004137641.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g12770 [Cucumis sativus])

HSP 1 Score: 112.1 bits (279), Expect = 3.7e-22
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = -3

Query: 33  EAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY 92
           EAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY
Sbjct: 381 EAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY 434

Query: 93   152
           
Sbjct: 441  434

Query: 153  195
           
Sbjct: 501  434

BLAST of CU150290 vs. NCBI nr
Match: gi|659068757|ref|XP_008446053.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Cucumis melo])

HSP 1 Score: 106.3 bits (264), Expect = 2.0e-20
Identity = 51/54 (94.44%), Postives = 52/54 (96.30%), Query Frame = -3

Query: 33  EAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY 92
           EAFIQQDGLASD QVSTSLIHLYCKFGS EKAEKVF+SMIHRDLAAWSSMMNGY
Sbjct: 381 EAFIQQDGLASDYQVSTSLIHLYCKFGSFEKAEKVFSSMIHRDLAAWSSMMNGY 434

Query: 93   152
           
Sbjct: 441  434

Query: 153  195
           
Sbjct: 501  434

BLAST of CU150290 vs. NCBI nr
Match: gi|823163162|ref|XP_012481514.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like isoform X3 [Gossypium raimondii])

HSP 1 Score: 77.4 bits (189), Expect = 1.0e-11
Identity = 33/54 (61.11%), Postives = 45/54 (83.33%), Query Frame = -3

Query: 33  EAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY 92
           E +++ +GLAS+ QV TSLIH+YCK G I+KAE+VF  ++H+DLA WSSM+NGY
Sbjct: 333 EHYVKLNGLASNQQVQTSLIHMYCKCGRIDKAEEVFAGVLHKDLAVWSSMINGY 386

Query: 93   152
           
Sbjct: 393  386

Query: 153  195
           
Sbjct: 453  386

BLAST of CU150290 vs. NCBI nr
Match: gi|823163158|ref|XP_012481512.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like isoform X1 [Gossypium raimondii])

HSP 1 Score: 77.4 bits (189), Expect = 1.0e-11
Identity = 33/54 (61.11%), Postives = 45/54 (83.33%), Query Frame = -3

Query: 33  EAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY 92
           E +++ +GLAS+ QV TSLIH+YCK G I+KAE+VF  ++H+DLA WSSM+NGY
Sbjct: 377 EHYVKLNGLASNQQVQTSLIHMYCKCGRIDKAEEVFAGVLHKDLAVWSSMINGY 430

Query: 93   152
           
Sbjct: 437  430

Query: 153  195
           
Sbjct: 497  430

BLAST of CU150290 vs. NCBI nr
Match: gi|823163160|ref|XP_012481513.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like isoform X2 [Gossypium raimondii])

HSP 1 Score: 77.4 bits (189), Expect = 1.0e-11
Identity = 33/54 (61.11%), Postives = 45/54 (83.33%), Query Frame = -3

Query: 33  EAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGY 92
           E +++ +GLAS+ QV TSLIH+YCK G I+KAE+VF  ++H+DLA WSSM+NGY
Sbjct: 351 EHYVKLNGLASNQQVQTSLIHMYCKCGRIDKAEEVFAGVLHKDLAVWSSMINGY 404

Query: 93   152
           
Sbjct: 411  404

Query: 153  195
           
Sbjct: 471  404