BLAST of Csa1G043310 vs. Swiss-Prot
Match:
PP320_ARATH (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana GN=DOT4 PE=2 SV=1)
HSP 1 Score: 366.3 bits (939), Expect = 6.4e-100
Identity = 197/580 (33.97%), Postives = 316/580 (54.48%), Query Frame = 1
Query: 21 WNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDGTMLHAHLI 80
WN+ + G F+ S+ + M SG+ +++TF + K+ ++L S+ G LH ++
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222
Query: 81 HVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFRVNEALK 140
GF V SLV Y K + ++R+VFDE + R VISWNS+I Y + + L
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282
Query: 141 LFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVENSLVQM 200
+F +ML G E + +T VS+ +G AD SL GR +H K + N+L+ M
Sbjct: 283 VFVQMLVSGIEIDLATIVSVFAGCADSRLISL--GRAVHSIGVKACFSREDRFCNTLLDM 342
Query: 201 YVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNNVVLDKFVF 260
Y G +DSA +VF +S+++V+S+T M+ GY + G + + F +M + + D +
Sbjct: 343 YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 402
Query: 261 VDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLSE 320
+++ C + L G +H + + L ++ + L+ MY+KCG + A VF +
Sbjct: 403 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 462
Query: 321 KSIYSWTSMISGYANAGYPREALSLFSMATQNN-VRPNGAMLATAISACADLGSLSMRRE 380
K I SW ++I GY+ Y EALSLF++ + P+ +A + ACA L + RE
Sbjct: 463 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGRE 522
Query: 381 IEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGM 440
I +I ++G SD V+ SL+ +Y K G++ A +F+ + +DL +W+ M+ GY +HG
Sbjct: 523 IHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGF 582
Query: 441 GEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGIVPTMVHYT 500
G++ + LF++M+++GI+ D + S+L ACSHSGLV++G F M+ + I PT+ HY
Sbjct: 583 GKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYA 642
Query: 501 CLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVELGEVANRCLLSSNPR 560
C+VD+L+R G L A I+ MP + W L CR + DV+L E + P
Sbjct: 643 CIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPE 702
Query: 561 NPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCS 600
N +VLMAN+Y KW++ ++R I +GL K PGCS
Sbjct: 703 NTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 740
HSP 2 Score: 225.7 bits (574), Expect = 1.3e-57
Identity = 138/457 (30.20%), Postives = 235/457 (51.42%), Query Frame = 1
Query: 59 LLKACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRS 118
+L+ CA+ S+ DG + + GF D + + L MY+ +L+ + +VFDE
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK 159
Query: 119 VISWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLL 178
+ WN ++ ++S + ++ LF++M+ G E +S TF + F+ S+ G L
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR--SVHGGEQL 219
Query: 179 HGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAV 238
HG + K + V NSLV Y+ ++DSA VF ++E+ VISW ++ GY+ G
Sbjct: 220 HGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLA 279
Query: 239 AKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLL 298
K F QM + + +D V + + C + LG ++HS+ +K ED L
Sbjct: 280 EKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTL 339
Query: 299 ISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNG 358
+ MYSKCGDL SA+AVF +S++S+ S+TSMI+GYA G EA+ LF + + P+
Sbjct: 340 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDV 399
Query: 359 AMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNS 418
+ ++ CA L + + +I+++ L D VS +L+ +Y K GS+++AE VF+
Sbjct: 400 YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSE 459
Query: 419 MIHRDLAAWSSMMNGYAVHGMGEKTMNLFH-EMQRSGIKPDGSVYASILLACSHSGLVED 478
M +D+ +W++++ GY+ + + ++LF+ ++ PD A +L AC+ +
Sbjct: 460 MRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDK 519
Query: 479 GLEHFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELA 515
G E + G LVD+ ++ G L LA
Sbjct: 520 GRE-IHGYIMRNGYFSDRHVANSLVDMYAKCGALLLA 553
HSP 3 Score: 166.0 bits (419), Expect = 1.3e-39
Identity = 111/425 (26.12%), Postives = 203/425 (47.76%), Query Frame = 1
Query: 102 SNLRASRQVFDETST--RSVISWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVS 161
++LR D +T RSV N+ + + S + A+KL + G ++ + T S
Sbjct: 42 ASLRTVSDCVDSITTFDRSVTDANTQLRRFCESGNLENAVKLL--CVSGKWDIDPRTLCS 101
Query: 162 LLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISE 221
+L AD SL G+ + + D+ + + L MY N G + A VF +
Sbjct: 102 VLQLCADSK--SLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKI 161
Query: 222 KTVISWTIMLGGYLKAGAVAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSL 281
+ + W I++ K+G + F +M + V +D + F + S L ++ G L
Sbjct: 162 EKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQL 221
Query: 282 HSLLLKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYP 341
H +LK+G + +G L++ Y K + SAR VFD ++E+ + SW S+I+GY + G
Sbjct: 222 HGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLA 281
Query: 342 REALSLFSMATQNNVRPNGAMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSL 401
+ LS+F + + + A + + + CAD +S+ R + + + + + + +L
Sbjct: 282 EKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTL 341
Query: 402 IHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDG 461
+ +Y K G ++ A+ VF M R + +++SM+ GYA G+ + + LF EM+ GI PD
Sbjct: 342 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDV 401
Query: 462 SVYASILLACSHSGLVEDGL---EHFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALN 521
++L C+ L+++G E K L + I + L+D+ ++ G ++ A
Sbjct: 402 YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS----NALMDMYAKCGSMQEAEL 458
BLAST of Csa1G043310 vs. Swiss-Prot
Match:
PP390_ARATH (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1)
HSP 1 Score: 365.5 bits (937), Expect = 1.1e-99
Identity = 220/630 (34.92%), Postives = 330/630 (52.38%), Query Frame = 1
Query: 18 LYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDGTMLHA 77
+Y WN IRS + G + L + M +N+TFP + KAC ++S+ G HA
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151
Query: 78 HLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFRVNE 137
+ GF S+VFV +LV MYS+ +L +R+VFDE S V+SWNS+I +Y++ +
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV 211
Query: 138 ALKLFREMLGG-GFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVENS 197
AL++F M G P++ T V++L A SL G+ LH ++ + V N
Sbjct: 212 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSL--GKQLHCFAVTSEMIQNMFVGNC 271
Query: 198 LVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGA---VAKVFETFS------- 257
LV MY G +D A +VF +S K V+SW M+ GY + G ++FE
Sbjct: 272 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 331
Query: 258 -------------------------QMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHS 317
QM + + ++ + ++S C +G L G +H
Sbjct: 332 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 391
Query: 318 L-------LLKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLS--EKSIYSWTSMISG 377
L K G E+ + LI MY+KC + +ARA+FD LS E+ + +WT MI G
Sbjct: 392 YAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGG 451
Query: 378 YANAGYPREALSLFSMATQNN--VRPNGAMLATAISACADLGSLSMRREIEAF-IQQDGL 437
Y+ G +AL L S + + RPN ++ A+ ACA L +L + ++I A+ ++
Sbjct: 452 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQN 511
Query: 438 ASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHE 497
A VS LI +Y K GSI A VF++M+ ++ W+S+M GY +HG GE+ + +F E
Sbjct: 512 AVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDE 571
Query: 498 MQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGIVPTMVHYTCLVDILSRAG 557
M+R G K DG +L ACSHSG+++ G+E+F M+ +G+ P HY CLVD+L RAG
Sbjct: 572 MRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAG 631
Query: 558 HLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVELGEVANRCLLSSNPRNPVNHVLMAN 600
L AL I+EMP + W FLS CR + VELGE A + + ++ L++N
Sbjct: 632 RLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSN 691
HSP 2 Score: 152.1 bits (383), Expect = 1.9e-35
Identity = 98/339 (28.91%), Postives = 165/339 (48.67%), Query Frame = 1
Query: 171 SLFQGRLLHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVF--YAISEKTVISWTIM 230
++ Q +L+H L F + + + L+ Y++ G + A S+ + S+ V W +
Sbjct: 40 TISQVKLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSL 99
Query: 231 LGGYLKAGAVAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGL 290
+ Y G K F M + D + F + +C ++ ++ G S H+L L TG
Sbjct: 100 IRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGF 159
Query: 291 KYEDPIGCLLISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFS- 350
+G L++MYS+C L AR VFD +S + SW S+I YA G P+ AL +FS
Sbjct: 160 ISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSR 219
Query: 351 MATQNNVRPNGAMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFG 410
M + RP+ L + CA LG+ S+ +++ F + + V L+ +Y K G
Sbjct: 220 MTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCG 279
Query: 411 SIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILL 470
+++A VF++M +D+ +W++M+ GY+ G E + LF +MQ IK D +++ +
Sbjct: 280 MMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAIS 339
Query: 471 ACSHSGLVEDGLEHFKNMQLDYGIVPTMVHYTCLVDILS 507
+ GL + L + M L GI P V L+ +LS
Sbjct: 340 GYAQRGLGYEALGVCRQM-LSSGIKPNEV---TLISVLS 373
BLAST of Csa1G043310 vs. Swiss-Prot
Match:
PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 362.8 bits (930), Expect = 7.0e-99
Identity = 197/578 (34.08%), Postives = 318/578 (55.02%), Query Frame = 1
Query: 59 LLKACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDM--YSKFSNLRASRQVFDETST 118
L++ C +L + H H+I G SD + + L M S F++L +R+VFDE
Sbjct: 36 LIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPK 95
Query: 119 RSVISWNSMIAAYSRSFRVNEALKLFREMLGGG-FEPNSSTFVSLLSGFADPTHGSLFQG 178
+ +WN++I AY+ ++ F +M+ PN TF L+ A+ + SL G
Sbjct: 96 PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVS--SLSLG 155
Query: 179 RLLHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKA 238
+ LHG K + D V NSL+ Y + G +DSAC VF I EK V+SW M+ G+++
Sbjct: 156 QSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 215
Query: 239 GAVAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIG 298
G+ K E F +M +V V ++S+C ++ NL G + S + + + +
Sbjct: 216 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLA 275
Query: 299 CLLISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYA--------------------- 358
++ MY+KCG + A+ +FD + EK +WT+M+ GYA
Sbjct: 276 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIV 335
Query: 359 --NA--------GYPREALSLF-SMATQNNVRPNGAMLATAISACADLGSLSMRREIEAF 418
NA G P EAL +F + Q N++ N L + +SACA +G+L + R I ++
Sbjct: 336 AWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSY 395
Query: 419 IQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGMGEKT 478
I++ G+ + V+++LIH+Y K G +EK+ +VFNS+ RD+ WS+M+ G A+HG G +
Sbjct: 396 IKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEA 455
Query: 479 MNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGIVPTMVHYTCLVD 538
+++F++MQ + +KP+G + ++ ACSH+GLV++ F M+ +YGIVP HY C+VD
Sbjct: 456 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVD 515
Query: 539 ILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVELGEVANRCLLSSNPRNPVN 598
+L R+G+LE A+ I+ MP + W L AC+ + ++ L E+A LL PRN
Sbjct: 516 VLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGA 575
Query: 599 HVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQL 602
HVL++N+Y +GKW+ +++R + GL KEPGCS +
Sbjct: 576 HVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSI 608
HSP 2 Score: 150.2 bits (378), Expect = 7.2e-35
Identity = 122/471 (25.90%), Postives = 207/471 (43.95%), Query Frame = 1
Query: 13 ITKKPLYLWNLTIRSSVNGGFFAQSLETY-SFMRHSGIHGNNFTFPLLLKACANLASIGD 72
I K + WN IR+ +G S+ + + S + N +TFP L+KA A ++S+
Sbjct: 90 IPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSL 149
Query: 73 GTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSR 132
G LH + SDVFV SL+ Y +L ++ +VF + V+SWNSMI + +
Sbjct: 150 GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 209
Query: 133 SFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDT 192
++AL+LF++M + + T V +LS A +L GR + + + +++ +
Sbjct: 210 KGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIR--NLEFGRQVCSYIEENRVNVNL 269
Query: 193 PVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQN 252
+ N+++ MY G I+ A +F A+ EK ++WT ML GY + E + M Q
Sbjct: 270 TLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK 329
Query: 253 NVVLDKFVFVDIISSCIQLG--NLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKC---- 312
++V + +IS+ Q G N L H L L+ +K L+S S C
Sbjct: 330 DIV----AWNALISAYEQNGKPNEAL-IVFHELQLQKNMKLNQ---ITLVSTLSACAQVG 389
Query: 313 ----------------------------------GDLLSARAVFDLLSEKSIYSWTSMIS 372
GDL +R VF+ + ++ ++ W++MI
Sbjct: 390 ALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIG 449
Query: 373 GYANAGYPREALSLFSMATQNNVRPNGAMLATAISACADLGSLSMRREIEAFIQQ----D 432
G A G EA+ +F + NV+PNG AC+ G + E E+ Q
Sbjct: 450 GLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVD---EAESLFHQMESNY 509
Query: 433 GLASDSQVSTSLIHLYCKFGSIEKAEKVFNSM-IHRDLAAWSSMMNGYAVH 438
G+ + + ++ + + G +EKA K +M I + W +++ +H
Sbjct: 510 GIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIH 547
HSP 3 Score: 104.8 bits (260), Expect = 3.5e-21
Identity = 101/421 (23.99%), Postives = 182/421 (43.23%), Query Frame = 1
Query: 85 ESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFRVNEALKLFRE 144
E D T+++D Y+ + A+R+V + + +++WN++I+AY ++ + NEAL +F E
Sbjct: 295 EKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHE 354
Query: 145 M-LGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVENSLVQMYVN 204
+ L + N T VS LS A G+L GR +H + K + + V ++L+ MY
Sbjct: 355 LQLQKNMKLNQITLVSTLSACAQV--GALELGRWIHSYIKKHGIRMNFHVTSALIHMYSK 414
Query: 205 FGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNNVVLDKFVFVDI 264
G ++ + VF ++ ++ V W+ M+GG G + + F +M++ NV + F ++
Sbjct: 415 CGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNV 474
Query: 265 ISSCIQLGNLFLGSSL-HSLLLKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLSEKS 324
+C G + SL H + G+ E+ ++ + + G L A +
Sbjct: 475 FCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKA---VKFIEAMP 534
Query: 325 IYSWTSMISGYANAGYPREALSLFSMA----TQNNVRPNGAMLATAISACADLGSLSMRR 384
I TS+ A L+L MA + R +GA + + + A LG
Sbjct: 535 IPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLS-NIYAKLGKWENVS 594
Query: 385 EIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHG 444
E+ ++ GL + S SIE + MIH ++G H
Sbjct: 595 ELRKHMRVTGLKKEPGCS-----------SIE-----IDGMIH-------EFLSGDNAHP 654
Query: 445 MGEKTMNLFHE----MQRSGIKPDGSVYASILLACSHSGLVEDGLE-HFKNMQLDYGIVP 495
M EK HE ++ +G +P+ + +L + E L H + + + YG++
Sbjct: 655 MSEKVYGKLHEVMEKLKSNGYEPE---ISQVLQIIEEEEMKEQSLNLHSEKLAICYGLIS 683
BLAST of Csa1G043310 vs. Swiss-Prot
Match:
PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1)
HSP 1 Score: 359.8 bits (922), Expect = 6.0e-98
Identity = 193/556 (34.71%), Postives = 314/556 (56.47%), Query Frame = 1
Query: 46 HSGIHGNNFTFPLLLKACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLR 105
+SGIH ++F + L+ + + A + +HA L+ +G + F+ T L+ S F ++
Sbjct: 15 NSGIHSDSF-YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDIT 74
Query: 106 ASRQVFDETSTRSVISWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFA 165
+RQVFD+ + WN++I YSR+ +AL ++ M P+S TF LL +
Sbjct: 75 FARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS 134
Query: 166 DPTHGSLFQGRLLHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAIS--EKTVI 225
+H L GR +H + + D V+N L+ +Y ++ SA +VF + E+T++
Sbjct: 135 GLSH--LQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIV 194
Query: 226 SWTIMLGGYLKAGAVAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLL 285
SWT ++ Y + G + E FSQMR+ +V D V ++++ L +L G S+H+ +
Sbjct: 195 SWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASV 254
Query: 286 LKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREAL 345
+K GL+ E + L +MY+KCG + +A+ +FD + ++ W +MISGYA GY REA+
Sbjct: 255 VKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAI 314
Query: 346 SLFSMATQNNVRPNGAMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLY 405
+F +VRP+ + +AISACA +GSL R + ++ + D +S++LI ++
Sbjct: 315 DMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMF 374
Query: 406 CKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYA 465
K GS+E A VF+ + RD+ WS+M+ GY +HG + ++L+ M+R G+ P+ +
Sbjct: 375 AKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFL 434
Query: 466 SILLACSHSGLVEDGLEHFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPT 525
+L+AC+HSG+V +G F N D+ I P HY C++D+L RAGHL+ A I+ MP
Sbjct: 435 GLLMACNHSGMVREGWWFF-NRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPV 494
Query: 526 QFQSQAWAPFLSACRTYCDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKV 585
Q W LSAC+ + VELGE A + L S +P N ++V ++NLY + W A+V
Sbjct: 495 QPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEV 554
Query: 586 RSLIDDKGLVKEPGCS 600
R + +KGL K+ GCS
Sbjct: 555 RVRMKEKGLNKDVGCS 563
HSP 2 Score: 109.0 bits (271), Expect = 1.8e-22
Identity = 69/320 (21.56%), Postives = 145/320 (45.31%), Query Frame = 1
Query: 13 ITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDG 72
+ ++ + W + + G ++LE +S MR + + +L A L + G
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQG 241
Query: 73 TMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRS 132
+HA ++ +G E + + SL MY+K + ++ +FD+ + ++I WN+MI+ Y+++
Sbjct: 242 RSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN 301
Query: 133 FRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTP 192
EA+ +F EM+ P++ + S +S A GSL Q R ++ + + DD
Sbjct: 302 GYAREAIDMFHEMINKDVRPDTISITSAISACAQV--GSLEQARSMYEYVGRSDYRDDVF 361
Query: 193 VENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNN 252
+ ++L+ M+ G ++ A VF ++ V+ W+ M+ GY G + + M +
Sbjct: 362 ISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGG 421
Query: 253 VVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSAR 312
V + F+ ++ +C G + G + + + + +I + + G L A
Sbjct: 422 VHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAY 481
Query: 313 AVFDLLS-EKSIYSWTSMIS 332
V + + + W +++S
Sbjct: 482 EVIKCMPVQPGVTVWGALLS 499
BLAST of Csa1G043310 vs. Swiss-Prot
Match:
PP146_ARATH (Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3 SV=1)
HSP 1 Score: 359.0 bits (920), Expect = 1.0e-97
Identity = 203/591 (34.35%), Postives = 322/591 (54.48%), Query Frame = 1
Query: 13 ITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDG 72
I + YLW + +R + ++ Y + G ++ F LKAC L + +G
Sbjct: 102 IPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNG 161
Query: 73 TMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRS 132
+H L+ V +V V T L+DMY+K ++++ +VF++ + R+V+ W SMIA Y ++
Sbjct: 162 KKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKN 221
Query: 133 FRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTP 192
E L LF M N T+ +L+ A +L QG+ HGCL K + +
Sbjct: 222 DLCEEGLVLFNRMRENNVLGNEYTYGTLI--MACTKLSALHQGKWFHGCLVKSGIELSSC 281
Query: 193 VENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNN 252
+ SL+ MYV G I +A VF S ++ WT M+ GY G+V + F +M+
Sbjct: 282 LVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE 341
Query: 253 VVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSAR 312
+ + ++S C + NL LG S+H L +K G+ ++ + L+ MY+KC A+
Sbjct: 342 IKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAK 401
Query: 313 AVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAISACADLG 372
VF++ SEK I +W S+ISG++ G EAL LF +V PNG +A+ SACA LG
Sbjct: 402 YVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLG 461
Query: 373 SLSMRREIEAFIQQDG-LASDS-QVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSM 432
SL++ + A+ + G LAS S V T+L+ Y K G + A +F+++ ++ WS+M
Sbjct: 462 SLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAM 521
Query: 433 MNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYG 492
+ GY G ++ LF EM + KP+ S + SIL AC H+G+V +G ++F +M DY
Sbjct: 522 IGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYN 581
Query: 493 IVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVELGEVAN 552
P+ HYTC+VD+L+RAG LE AL+ I++MP Q + + FL C + +LGE+
Sbjct: 582 FTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVI 641
Query: 553 RCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQL 602
+ +L +P + +VL++NLY S G+W +A +VR+L+ +GL K G S +
Sbjct: 642 KKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTM 688
HSP 2 Score: 221.1 bits (562), Expect = 3.3e-56
Identity = 141/471 (29.94%), Postives = 233/471 (49.47%), Query Frame = 1
Query: 58 LLLKACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTR 117
LLL C N+ S+ H L G D+ + T LV +Y F + +R VFD+
Sbjct: 49 LLLSKCTNIDSLRQS---HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEP 108
Query: 118 SVISWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRL 177
W M+ Y + E +KL+ ++ GF + F L + L G+
Sbjct: 109 DFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQ--DLDNGKK 168
Query: 178 LHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGA 237
+H L K D+ V L+ MY G+I SA VF I+ + V+ WT M+ GY+K
Sbjct: 169 IHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDL 228
Query: 238 VAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCL 297
+ F++MR+NNV+ +++ + +I +C +L L G H L+K+G++ +
Sbjct: 229 CEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTS 288
Query: 298 LISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPN 357
L+ MY KCGD+ +AR VF+ S + WT+MI GY + G EALSLF ++PN
Sbjct: 289 LLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPN 348
Query: 358 GAMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFN 417
+A+ +S C + +L + R + + G+ D+ V+ +L+H+Y K A+ VF
Sbjct: 349 CVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFE 408
Query: 418 SMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVED 477
+D+ AW+S+++G++ +G + + LFH M + P+G AS+ AC+ G +
Sbjct: 409 MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAV 468
Query: 478 GLE-HFKNMQLDYGIVPTMVHY-TCLVDILSRAG---HLELALNTIQEMPT 524
G H +++L + + + VH T L+D ++ G L +TI+E T
Sbjct: 469 GSSLHAYSVKLGF-LASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNT 511
BLAST of Csa1G043310 vs. TrEMBL
Match:
A0A0A0LT91_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043310 PE=4 SV=1)
HSP 1 Score: 1200.3 bits (3104), Expect = 0.0e+00
Identity = 601/601 (100.00%), Postives = 601/601 (100.00%), Query Frame = 1
Query: 1 MQIHRFSSSSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLL 60
MQIHRFSSSSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLL
Sbjct: 1 MQIHRFSSSSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLL 60
Query: 61 KACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVI 120
KACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVI
Sbjct: 61 KACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVI 120
Query: 121 SWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHG 180
SWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHG
Sbjct: 121 SWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHG 180
Query: 181 CLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAK 240
CLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAK
Sbjct: 181 CLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAK 240
Query: 241 VFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLIS 300
VFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLIS
Sbjct: 241 VFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLIS 300
Query: 301 MYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAM 360
MYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAM
Sbjct: 301 MYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAM 360
Query: 361 LATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMI 420
LATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMI
Sbjct: 361 LATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMI 420
Query: 421 HRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLE 480
HRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLE
Sbjct: 421 HRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLE 480
Query: 481 HFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTY 540
HFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTY
Sbjct: 481 HFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTY 540
Query: 541 CDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQ 600
CDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQ
Sbjct: 541 CDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQ 600
Query: 601 L 602
L
Sbjct: 601 L 601
BLAST of Csa1G043310 vs. TrEMBL
Match:
A0A0D2RDY6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G014400 PE=4 SV=1)
HSP 1 Score: 651.0 bits (1678), Expect = 1.4e-183
Identity = 330/605 (54.55%), Postives = 440/605 (72.73%), Query Frame = 1
Query: 3 IHRFSSSSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFM-RHSGIHGNNFTFPLLLK 62
+ F +S K+PLYL+NL IR+S N G FA +L+ YS M R + +HGN+FTFPLL K
Sbjct: 1 MRHFPLNSITSKKRPLYLFNLKIRNSTNNGDFADTLKIYSSMLRDTPVHGNSFTFPLLFK 60
Query: 63 ACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVIS 122
ACA+L S+ DGT LHAH++ +GF+ D+FVQTSL+DMYSK S+L ++R VFDE R+V+
Sbjct: 61 ACASLNSLHDGTKLHAHVLQLGFQQDIFVQTSLLDMYSKCSDLASARNVFDEMVMRNVVC 120
Query: 123 WNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGC 182
WN+MI+AY R FRV EA+ L +EM GFE N+STFVS+++ + L G +H C
Sbjct: 121 WNTMISAYCRCFRVMEAMNLLKEMWVIGFELNASTFVSVIAACTN-----LRLGLSMHCC 180
Query: 183 LTKFQL-HDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAK 242
+ K L H + P+ NS+V MYV FG ID A S+F + E++++SWT ++GGY+ G V +
Sbjct: 181 VFKLGLLHCEIPLANSVVNMYVKFGLIDDARSIFDTVDERSILSWTTIIGGYVSVGNVGE 240
Query: 243 VFETFSQMRQNNVVL-DKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLI 302
F F++MRQ V D +FV IIS C++ GNL L SS+HSL+LK+G E I ++
Sbjct: 241 AFNLFNRMRQMGCVSQDMVLFVKIISGCVKSGNLLLASSVHSLVLKSGFHGEASIDNSVL 300
Query: 303 SMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGA 362
+MYSKCGD++SAR VF+++ EK I+ WTSMI+ GYP EAL LF + +++PN A
Sbjct: 301 NMYSKCGDIVSARRVFEMVDEKCIFLWTSMIAANTQHGYPAEALDLFKSLLRTDLKPNEA 360
Query: 363 MLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSM 422
+A+ +SACADLGSLS+ EIE +++ +GLAS+ QV TSLIH+YCK G I+KAE+VF +
Sbjct: 361 TIASILSACADLGSLSIGNEIEHYVKLNGLASNQQVQTSLIHMYCKCGRIDKAEEVFAGV 420
Query: 423 IHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKP---DGSVYASILLACSHSGLVE 482
+H+DLA WSSM+NGYA+HGMG + + LFH MQ + KP D V+ SILLACSHSGLVE
Sbjct: 421 LHKDLAVWSSMINGYAIHGMGNEALKLFHRMQIT--KPCSLDHVVFTSILLACSHSGLVE 480
Query: 483 DGLEHFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSA 542
DGL+++K+M+ DYGI P + HYTCLVD+L RAGH +LAL TIQEMP Q Q+Q WAP LS+
Sbjct: 481 DGLKYYKSMKDDYGIEPGIEHYTCLVDLLGRAGHFDLALKTIQEMPLQVQAQVWAPLLSS 540
Query: 543 CRTYCDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEP 602
CR +C +ELGE + LL NP N ++VLMAN+YTS GKWKEAAK RS++ +KGLVKEP
Sbjct: 541 CRKHCKIELGEYVAKKLLDLNPGNTSSYVLMANIYTSAGKWKEAAKTRSMMRNKGLVKEP 598
BLAST of Csa1G043310 vs. TrEMBL
Match:
A0A0L9VHU5_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g052300 PE=4 SV=1)
HSP 1 Score: 649.8 bits (1675), Expect = 3.2e-183
Identity = 328/597 (54.94%), Postives = 433/597 (72.53%), Query Frame = 1
Query: 8 SSSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLA 67
SSS + ++PLYLWNL IR S N GFF Q+L Y M HSG+HGNN T+PLLLKACANLA
Sbjct: 5 SSSLVSFRRPLYLWNLMIRDSTNNGFFIQTLNIYFSMAHSGVHGNNLTYPLLLKACANLA 64
Query: 68 SIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIA 127
SI GT+LH H++ +GF++D FVQT+LVDMYSK S++ ++R VFDE R+V+SWN+M++
Sbjct: 65 SIQHGTVLHGHVLKLGFQADAFVQTALVDMYSKSSHVESARLVFDEMPHRTVVSWNTMVS 124
Query: 128 AYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFAD-PTHGSLFQGRLLHGCLTKFQ 187
AYSR +++AL L +EM GF+P +STFVS+LSG+++ T QG +H CL K
Sbjct: 125 AYSRVSSMDQALSLLKEMGVLGFKPTASTFVSILSGYSNLDTFKFRLQGVSIHSCLIKLG 184
Query: 188 L-HDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETF 247
+ H + + NSL+ MY F ++D A VF + EK++ISWT M+GGY+K G A+ F F
Sbjct: 185 IVHREVSLANSLMAMYAQFCRMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAAEAFGLF 244
Query: 248 SQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKC 307
QM + +V +D VF+++IS CIQ+G L L SS+HSL+LK G D + LLI+MYSKC
Sbjct: 245 KQMLRQSVGIDFVVFLNLISGCIQVGELLLASSVHSLVLKCGCDEADSVENLLITMYSKC 304
Query: 308 GDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAI 367
G+L AR +FDL+ EKS+ SWTSMI+GY ++G+P EAL LF + + RPNGA LAT +
Sbjct: 305 GNLTFARRIFDLIIEKSMLSWTSMIAGYVHSGHPVEALDLFRRMVKTDTRPNGATLATVL 364
Query: 368 SACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLA 427
SACADLGSLSM +EIE ++ G S+ QV TSLIH+Y K GSI+KA +VF + +DL
Sbjct: 365 SACADLGSLSMGQEIEEYVFLHGWESEQQVQTSLIHMYSKCGSIKKAREVFEKVTDKDLT 424
Query: 428 AWSSMMNGYAVHGMGEKTMNLFHEM-QRSGIKPDGSVYASILLACSHSGLVEDGLEHFKN 487
W+SM+N YA+HGMG + + LFH+M GI PD VY S+LLACSHSGLVEDGL++FK+
Sbjct: 425 VWTSMINSYAIHGMGNEAITLFHKMTTEEGIIPDAIVYTSVLLACSHSGLVEDGLKYFKS 484
Query: 488 MQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVE 547
MQ D+ I PT+ H TCL+D+L R G L+LAL+ IQ MP Q+QAW LSACR + +VE
Sbjct: 485 MQKDFKIAPTVEHCTCLIDLLGRVGQLDLALDAIQGMPLAVQAQAWGSLLSACRIHGNVE 544
Query: 548 LGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQL 602
LGE+A LL ++P ++VLM+NLYTS+GKWKEA +R+LID KGLVKE G SQ+
Sbjct: 545 LGELATFKLLETSPGRSGSYVLMSNLYTSLGKWKEAHMMRNLIDGKGLVKECGWSQV 601
BLAST of Csa1G043310 vs. TrEMBL
Match:
A0A0S3TBU1_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G208900 PE=4 SV=1)
HSP 1 Score: 649.8 bits (1675), Expect = 3.2e-183
Identity = 328/597 (54.94%), Postives = 433/597 (72.53%), Query Frame = 1
Query: 8 SSSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLA 67
SSS + ++PLYLWNL IR S N GFF Q+L Y M HSG+HGNN T+PLLLKACANLA
Sbjct: 5 SSSLVSFRRPLYLWNLMIRDSTNNGFFIQTLNIYFSMAHSGVHGNNLTYPLLLKACANLA 64
Query: 68 SIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIA 127
SI GT+LH H++ +GF++D FVQT+LVDMYSK S++ ++R VFDE R+V+SWN+M++
Sbjct: 65 SIQHGTVLHGHVLKLGFQADAFVQTALVDMYSKSSHVESARLVFDEMPHRTVVSWNTMVS 124
Query: 128 AYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFAD-PTHGSLFQGRLLHGCLTKFQ 187
AYSR +++AL L +EM GF+P +STFVS+LSG+++ T QG +H CL K
Sbjct: 125 AYSRVSSMDQALSLLKEMGVLGFKPTASTFVSILSGYSNLDTFKFRLQGVSIHSCLIKLG 184
Query: 188 L-HDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETF 247
+ H + + NSL+ MY F ++D A VF + EK++ISWT M+GGY+K G A+ F F
Sbjct: 185 IVHREVSLANSLMAMYAQFCRMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAAEAFGLF 244
Query: 248 SQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKC 307
QM + +V +D VF+++IS CIQ+G L L SS+HSL+LK G D + LLI+MYSKC
Sbjct: 245 KQMLRQSVGIDFVVFLNLISGCIQVGELLLASSVHSLVLKCGCDEADSVENLLITMYSKC 304
Query: 308 GDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAI 367
G+L AR +FDL+ EKS+ SWTSMI+GY ++G+P EAL LF + + RPNGA LAT +
Sbjct: 305 GNLTFARRIFDLIIEKSMLSWTSMIAGYVHSGHPVEALDLFRRMVKTDTRPNGATLATVL 364
Query: 368 SACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLA 427
SACADLGSLSM +EIE ++ G S+ QV TSLIH+Y K GSI+KA +VF + +DL
Sbjct: 365 SACADLGSLSMGQEIEEYVFLHGWESEQQVQTSLIHMYSKCGSIKKAREVFEKVTDKDLT 424
Query: 428 AWSSMMNGYAVHGMGEKTMNLFHEM-QRSGIKPDGSVYASILLACSHSGLVEDGLEHFKN 487
W+SM+N YA+HGMG + + LFH+M GI PD VY S+LLACSHSGLVEDGL++FK+
Sbjct: 425 VWTSMINSYAIHGMGNEAITLFHKMTTEEGIIPDAIVYTSVLLACSHSGLVEDGLKYFKS 484
Query: 488 MQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVE 547
MQ D+ I PT+ H TCL+D+L R G L+LAL+ IQ MP Q+QAW LSACR + +VE
Sbjct: 485 MQKDFKIAPTVEHCTCLIDLLGRVGQLDLALDAIQGMPLAVQAQAWGSLLSACRIHGNVE 544
Query: 548 LGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQL 602
LGE+A LL ++P ++VLM+NLYTS+GKWKEA +R+LID KGLVKE G SQ+
Sbjct: 545 LGELATFKLLETSPGRSGSYVLMSNLYTSLGKWKEAHMMRNLIDGKGLVKECGWSQV 601
BLAST of Csa1G043310 vs. TrEMBL
Match:
V7C2U8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G135700g PE=4 SV=1)
HSP 1 Score: 648.7 bits (1672), Expect = 7.1e-183
Identity = 327/596 (54.87%), Postives = 431/596 (72.32%), Query Frame = 1
Query: 9 SSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLAS 68
SS ++PLYLWNL IR S N GFF Q+L YS M HSG+HGNN T+PLLLKACANLAS
Sbjct: 6 SSLASFRRPLYLWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLAS 65
Query: 69 IGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAA 128
I GT+LH H++ +GF+ D FVQT+LVDMYSK S++ ++R VFDE RSV+SWN+M++A
Sbjct: 66 IQHGTVLHGHVLKLGFQEDTFVQTALVDMYSKCSHVASARLVFDEMPQRSVVSWNAMVSA 125
Query: 129 YSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFAD-PTHGSLFQGRLLHGCLTKFQL 188
YSR +++AL L +EM GFEP +STFVS+LSG+++ + QG +H CL K +
Sbjct: 126 YSRVSSMDQALSLLKEMWVLGFEPTASTFVSILSGYSELDSFKFRLQGESIHCCLIKLGI 185
Query: 189 -HDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFS 248
H + + NSL+ MY F +D A VF + EK++ISWT M+GGY+K G + F F+
Sbjct: 186 VHTEVSLGNSLMAMYAQFCIMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAFALFN 245
Query: 249 QMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCG 308
QM++ +V +D VF+++IS CIQ+G L L SS+HSL+LK G D I LLI+MY+KCG
Sbjct: 246 QMQRQSVGIDFVVFLNLISGCIQVGELLLASSVHSLVLKCGCDEVDSIENLLIAMYAKCG 305
Query: 309 DLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAIS 368
+L A+ +FD++ EKS+ SWTS+I+GYA++G+P EAL LF + ++RPNGA LA +S
Sbjct: 306 NLTFAKKIFDMIIEKSMLSWTSIIAGYAHSGHPAEALDLFRRMVKTDIRPNGATLAVVLS 365
Query: 369 ACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAA 428
ACADLGSLSM +EIE ++ +GL SD QV TSLIH+Y K GSI+KA +VF + +DL
Sbjct: 366 ACADLGSLSMGQEIEEYVFLNGLESDQQVQTSLIHMYSKCGSIKKAREVFERVTDKDLTV 425
Query: 429 WSSMMNGYAVHGMGEKTMNLFHEM-QRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNM 488
W+SM+N YA+HGMG + + LFH+M GI PD VY S+ LACSHSGLVEDGL++FK+M
Sbjct: 426 WTSMINSYAIHGMGNEAITLFHKMTTEEGIIPDAIVYTSVFLACSHSGLVEDGLKYFKSM 485
Query: 489 QLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVEL 548
Q D+ I PT+ H TCL+D+L R G L+LAL+ IQ MP Q+QAW LSACR + +VEL
Sbjct: 486 QKDFRIAPTVEHCTCLIDLLGRVGQLDLALDAIQGMPLAVQAQAWGSLLSACRIHGNVEL 545
Query: 549 GEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQL 602
GE+A LL P + ++VLMANLYTS GKWKEA +R+LID KGLVKE G SQ+
Sbjct: 546 GELATVKLLEIAPGSSGSYVLMANLYTSSGKWKEAHMMRNLIDGKGLVKECGWSQV 601
BLAST of Csa1G043310 vs. TAIR10
Match:
AT4G18750.1 (AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 366.3 bits (939), Expect = 3.6e-101
Identity = 197/580 (33.97%), Postives = 316/580 (54.48%), Query Frame = 1
Query: 21 WNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDGTMLHAHLI 80
WN+ + G F+ S+ + M SG+ +++TF + K+ ++L S+ G LH ++
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222
Query: 81 HVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFRVNEALK 140
GF V SLV Y K + ++R+VFDE + R VISWNS+I Y + + L
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282
Query: 141 LFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVENSLVQM 200
+F +ML G E + +T VS+ +G AD SL GR +H K + N+L+ M
Sbjct: 283 VFVQMLVSGIEIDLATIVSVFAGCADSRLISL--GRAVHSIGVKACFSREDRFCNTLLDM 342
Query: 201 YVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNNVVLDKFVF 260
Y G +DSA +VF +S+++V+S+T M+ GY + G + + F +M + + D +
Sbjct: 343 YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 402
Query: 261 VDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLSE 320
+++ C + L G +H + + L ++ + L+ MY+KCG + A VF +
Sbjct: 403 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 462
Query: 321 KSIYSWTSMISGYANAGYPREALSLFSMATQNN-VRPNGAMLATAISACADLGSLSMRRE 380
K I SW ++I GY+ Y EALSLF++ + P+ +A + ACA L + RE
Sbjct: 463 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGRE 522
Query: 381 IEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGM 440
I +I ++G SD V+ SL+ +Y K G++ A +F+ + +DL +W+ M+ GY +HG
Sbjct: 523 IHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGF 582
Query: 441 GEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGIVPTMVHYT 500
G++ + LF++M+++GI+ D + S+L ACSHSGLV++G F M+ + I PT+ HY
Sbjct: 583 GKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYA 642
Query: 501 CLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVELGEVANRCLLSSNPR 560
C+VD+L+R G L A I+ MP + W L CR + DV+L E + P
Sbjct: 643 CIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPE 702
Query: 561 NPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCS 600
N +VLMAN+Y KW++ ++R I +GL K PGCS
Sbjct: 703 NTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 740
HSP 2 Score: 225.7 bits (574), Expect = 7.6e-59
Identity = 138/457 (30.20%), Postives = 235/457 (51.42%), Query Frame = 1
Query: 59 LLKACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRS 118
+L+ CA+ S+ DG + + GF D + + L MY+ +L+ + +VFDE
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK 159
Query: 119 VISWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLL 178
+ WN ++ ++S + ++ LF++M+ G E +S TF + F+ S+ G L
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR--SVHGGEQL 219
Query: 179 HGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAV 238
HG + K + V NSLV Y+ ++DSA VF ++E+ VISW ++ GY+ G
Sbjct: 220 HGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLA 279
Query: 239 AKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLL 298
K F QM + + +D V + + C + LG ++HS+ +K ED L
Sbjct: 280 EKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTL 339
Query: 299 ISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNG 358
+ MYSKCGDL SA+AVF +S++S+ S+TSMI+GYA G EA+ LF + + P+
Sbjct: 340 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDV 399
Query: 359 AMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNS 418
+ ++ CA L + + +I+++ L D VS +L+ +Y K GS+++AE VF+
Sbjct: 400 YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSE 459
Query: 419 MIHRDLAAWSSMMNGYAVHGMGEKTMNLFH-EMQRSGIKPDGSVYASILLACSHSGLVED 478
M +D+ +W++++ GY+ + + ++LF+ ++ PD A +L AC+ +
Sbjct: 460 MRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDK 519
Query: 479 GLEHFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELA 515
G E + G LVD+ ++ G L LA
Sbjct: 520 GRE-IHGYIMRNGYFSDRHVANSLVDMYAKCGALLLA 553
HSP 3 Score: 166.0 bits (419), Expect = 7.1e-41
Identity = 111/425 (26.12%), Postives = 203/425 (47.76%), Query Frame = 1
Query: 102 SNLRASRQVFDETST--RSVISWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVS 161
++LR D +T RSV N+ + + S + A+KL + G ++ + T S
Sbjct: 42 ASLRTVSDCVDSITTFDRSVTDANTQLRRFCESGNLENAVKLL--CVSGKWDIDPRTLCS 101
Query: 162 LLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISE 221
+L AD SL G+ + + D+ + + L MY N G + A VF +
Sbjct: 102 VLQLCADSK--SLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKI 161
Query: 222 KTVISWTIMLGGYLKAGAVAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSL 281
+ + W I++ K+G + F +M + V +D + F + S L ++ G L
Sbjct: 162 EKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQL 221
Query: 282 HSLLLKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYP 341
H +LK+G + +G L++ Y K + SAR VFD ++E+ + SW S+I+GY + G
Sbjct: 222 HGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLA 281
Query: 342 REALSLFSMATQNNVRPNGAMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSL 401
+ LS+F + + + A + + + CAD +S+ R + + + + + + +L
Sbjct: 282 EKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTL 341
Query: 402 IHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDG 461
+ +Y K G ++ A+ VF M R + +++SM+ GYA G+ + + LF EM+ GI PD
Sbjct: 342 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDV 401
Query: 462 SVYASILLACSHSGLVEDGL---EHFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALN 521
++L C+ L+++G E K L + I + L+D+ ++ G ++ A
Sbjct: 402 YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS----NALMDMYAKCGSMQEAEL 458
BLAST of Csa1G043310 vs. TAIR10
Match:
AT5G16860.1 (AT5G16860.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 365.5 bits (937), Expect = 6.1e-101
Identity = 220/630 (34.92%), Postives = 330/630 (52.38%), Query Frame = 1
Query: 18 LYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDGTMLHA 77
+Y WN IRS + G + L + M +N+TFP + KAC ++S+ G HA
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151
Query: 78 HLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFRVNE 137
+ GF S+VFV +LV MYS+ +L +R+VFDE S V+SWNS+I +Y++ +
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV 211
Query: 138 ALKLFREMLGG-GFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVENS 197
AL++F M G P++ T V++L A SL G+ LH ++ + V N
Sbjct: 212 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSL--GKQLHCFAVTSEMIQNMFVGNC 271
Query: 198 LVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGA---VAKVFETFS------- 257
LV MY G +D A +VF +S K V+SW M+ GY + G ++FE
Sbjct: 272 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 331
Query: 258 -------------------------QMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHS 317
QM + + ++ + ++S C +G L G +H
Sbjct: 332 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 391
Query: 318 L-------LLKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLS--EKSIYSWTSMISG 377
L K G E+ + LI MY+KC + +ARA+FD LS E+ + +WT MI G
Sbjct: 392 YAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGG 451
Query: 378 YANAGYPREALSLFSMATQNN--VRPNGAMLATAISACADLGSLSMRREIEAF-IQQDGL 437
Y+ G +AL L S + + RPN ++ A+ ACA L +L + ++I A+ ++
Sbjct: 452 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQN 511
Query: 438 ASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHE 497
A VS LI +Y K GSI A VF++M+ ++ W+S+M GY +HG GE+ + +F E
Sbjct: 512 AVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDE 571
Query: 498 MQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGIVPTMVHYTCLVDILSRAG 557
M+R G K DG +L ACSHSG+++ G+E+F M+ +G+ P HY CLVD+L RAG
Sbjct: 572 MRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAG 631
Query: 558 HLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVELGEVANRCLLSSNPRNPVNHVLMAN 600
L AL I+EMP + W FLS CR + VELGE A + + ++ L++N
Sbjct: 632 RLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSN 691
HSP 2 Score: 152.1 bits (383), Expect = 1.1e-36
Identity = 98/339 (28.91%), Postives = 165/339 (48.67%), Query Frame = 1
Query: 171 SLFQGRLLHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVF--YAISEKTVISWTIM 230
++ Q +L+H L F + + + L+ Y++ G + A S+ + S+ V W +
Sbjct: 40 TISQVKLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSL 99
Query: 231 LGGYLKAGAVAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGL 290
+ Y G K F M + D + F + +C ++ ++ G S H+L L TG
Sbjct: 100 IRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGF 159
Query: 291 KYEDPIGCLLISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFS- 350
+G L++MYS+C L AR VFD +S + SW S+I YA G P+ AL +FS
Sbjct: 160 ISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSR 219
Query: 351 MATQNNVRPNGAMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFG 410
M + RP+ L + CA LG+ S+ +++ F + + V L+ +Y K G
Sbjct: 220 MTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCG 279
Query: 411 SIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILL 470
+++A VF++M +D+ +W++M+ GY+ G E + LF +MQ IK D +++ +
Sbjct: 280 MMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAIS 339
Query: 471 ACSHSGLVEDGLEHFKNMQLDYGIVPTMVHYTCLVDILS 507
+ GL + L + M L GI P V L+ +LS
Sbjct: 340 GYAQRGLGYEALGVCRQM-LSSGIKPNEV---TLISVLS 373
BLAST of Csa1G043310 vs. TAIR10
Match:
AT2G29760.1 (AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 362.8 bits (930), Expect = 4.0e-100
Identity = 197/578 (34.08%), Postives = 318/578 (55.02%), Query Frame = 1
Query: 59 LLKACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDM--YSKFSNLRASRQVFDETST 118
L++ C +L + H H+I G SD + + L M S F++L +R+VFDE
Sbjct: 36 LIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPK 95
Query: 119 RSVISWNSMIAAYSRSFRVNEALKLFREMLGGG-FEPNSSTFVSLLSGFADPTHGSLFQG 178
+ +WN++I AY+ ++ F +M+ PN TF L+ A+ + SL G
Sbjct: 96 PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVS--SLSLG 155
Query: 179 RLLHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKA 238
+ LHG K + D V NSL+ Y + G +DSAC VF I EK V+SW M+ G+++
Sbjct: 156 QSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 215
Query: 239 GAVAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIG 298
G+ K E F +M +V V ++S+C ++ NL G + S + + + +
Sbjct: 216 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLA 275
Query: 299 CLLISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYA--------------------- 358
++ MY+KCG + A+ +FD + EK +WT+M+ GYA
Sbjct: 276 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIV 335
Query: 359 --NA--------GYPREALSLF-SMATQNNVRPNGAMLATAISACADLGSLSMRREIEAF 418
NA G P EAL +F + Q N++ N L + +SACA +G+L + R I ++
Sbjct: 336 AWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSY 395
Query: 419 IQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGMGEKT 478
I++ G+ + V+++LIH+Y K G +EK+ +VFNS+ RD+ WS+M+ G A+HG G +
Sbjct: 396 IKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEA 455
Query: 479 MNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGIVPTMVHYTCLVD 538
+++F++MQ + +KP+G + ++ ACSH+GLV++ F M+ +YGIVP HY C+VD
Sbjct: 456 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVD 515
Query: 539 ILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVELGEVANRCLLSSNPRNPVN 598
+L R+G+LE A+ I+ MP + W L AC+ + ++ L E+A LL PRN
Sbjct: 516 VLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGA 575
Query: 599 HVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQL 602
HVL++N+Y +GKW+ +++R + GL KEPGCS +
Sbjct: 576 HVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSI 608
HSP 2 Score: 150.2 bits (378), Expect = 4.0e-36
Identity = 122/471 (25.90%), Postives = 207/471 (43.95%), Query Frame = 1
Query: 13 ITKKPLYLWNLTIRSSVNGGFFAQSLETY-SFMRHSGIHGNNFTFPLLLKACANLASIGD 72
I K + WN IR+ +G S+ + + S + N +TFP L+KA A ++S+
Sbjct: 90 IPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSL 149
Query: 73 GTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSR 132
G LH + SDVFV SL+ Y +L ++ +VF + V+SWNSMI + +
Sbjct: 150 GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 209
Query: 133 SFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDT 192
++AL+LF++M + + T V +LS A +L GR + + + +++ +
Sbjct: 210 KGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIR--NLEFGRQVCSYIEENRVNVNL 269
Query: 193 PVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQN 252
+ N+++ MY G I+ A +F A+ EK ++WT ML GY + E + M Q
Sbjct: 270 TLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK 329
Query: 253 NVVLDKFVFVDIISSCIQLG--NLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKC---- 312
++V + +IS+ Q G N L H L L+ +K L+S S C
Sbjct: 330 DIV----AWNALISAYEQNGKPNEAL-IVFHELQLQKNMKLNQ---ITLVSTLSACAQVG 389
Query: 313 ----------------------------------GDLLSARAVFDLLSEKSIYSWTSMIS 372
GDL +R VF+ + ++ ++ W++MI
Sbjct: 390 ALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIG 449
Query: 373 GYANAGYPREALSLFSMATQNNVRPNGAMLATAISACADLGSLSMRREIEAFIQQ----D 432
G A G EA+ +F + NV+PNG AC+ G + E E+ Q
Sbjct: 450 GLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVD---EAESLFHQMESNY 509
Query: 433 GLASDSQVSTSLIHLYCKFGSIEKAEKVFNSM-IHRDLAAWSSMMNGYAVH 438
G+ + + ++ + + G +EKA K +M I + W +++ +H
Sbjct: 510 GIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIH 547
HSP 3 Score: 104.8 bits (260), Expect = 1.9e-22
Identity = 101/421 (23.99%), Postives = 182/421 (43.23%), Query Frame = 1
Query: 85 ESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFRVNEALKLFRE 144
E D T+++D Y+ + A+R+V + + +++WN++I+AY ++ + NEAL +F E
Sbjct: 295 EKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHE 354
Query: 145 M-LGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVENSLVQMYVN 204
+ L + N T VS LS A G+L GR +H + K + + V ++L+ MY
Sbjct: 355 LQLQKNMKLNQITLVSTLSACAQV--GALELGRWIHSYIKKHGIRMNFHVTSALIHMYSK 414
Query: 205 FGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNNVVLDKFVFVDI 264
G ++ + VF ++ ++ V W+ M+GG G + + F +M++ NV + F ++
Sbjct: 415 CGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNV 474
Query: 265 ISSCIQLGNLFLGSSL-HSLLLKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLSEKS 324
+C G + SL H + G+ E+ ++ + + G L A +
Sbjct: 475 FCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKA---VKFIEAMP 534
Query: 325 IYSWTSMISGYANAGYPREALSLFSMA----TQNNVRPNGAMLATAISACADLGSLSMRR 384
I TS+ A L+L MA + R +GA + + + A LG
Sbjct: 535 IPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLS-NIYAKLGKWENVS 594
Query: 385 EIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHG 444
E+ ++ GL + S SIE + MIH ++G H
Sbjct: 595 ELRKHMRVTGLKKEPGCS-----------SIE-----IDGMIH-------EFLSGDNAHP 654
Query: 445 MGEKTMNLFHE----MQRSGIKPDGSVYASILLACSHSGLVEDGLE-HFKNMQLDYGIVP 495
M EK HE ++ +G +P+ + +L + E L H + + + YG++
Sbjct: 655 MSEKVYGKLHEVMEKLKSNGYEPE---ISQVLQIIEEEEMKEQSLNLHSEKLAICYGLIS 683
BLAST of Csa1G043310 vs. TAIR10
Match:
AT3G12770.1 (AT3G12770.1 mitochondrial editing factor 22)
HSP 1 Score: 359.8 bits (922), Expect = 3.4e-99
Identity = 193/556 (34.71%), Postives = 314/556 (56.47%), Query Frame = 1
Query: 46 HSGIHGNNFTFPLLLKACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLR 105
+SGIH ++F + L+ + + A + +HA L+ +G + F+ T L+ S F ++
Sbjct: 15 NSGIHSDSF-YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDIT 74
Query: 106 ASRQVFDETSTRSVISWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFA 165
+RQVFD+ + WN++I YSR+ +AL ++ M P+S TF LL +
Sbjct: 75 FARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS 134
Query: 166 DPTHGSLFQGRLLHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAIS--EKTVI 225
+H L GR +H + + D V+N L+ +Y ++ SA +VF + E+T++
Sbjct: 135 GLSH--LQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIV 194
Query: 226 SWTIMLGGYLKAGAVAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLL 285
SWT ++ Y + G + E FSQMR+ +V D V ++++ L +L G S+H+ +
Sbjct: 195 SWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASV 254
Query: 286 LKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREAL 345
+K GL+ E + L +MY+KCG + +A+ +FD + ++ W +MISGYA GY REA+
Sbjct: 255 VKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAI 314
Query: 346 SLFSMATQNNVRPNGAMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLY 405
+F +VRP+ + +AISACA +GSL R + ++ + D +S++LI ++
Sbjct: 315 DMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMF 374
Query: 406 CKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYA 465
K GS+E A VF+ + RD+ WS+M+ GY +HG + ++L+ M+R G+ P+ +
Sbjct: 375 AKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFL 434
Query: 466 SILLACSHSGLVEDGLEHFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPT 525
+L+AC+HSG+V +G F N D+ I P HY C++D+L RAGHL+ A I+ MP
Sbjct: 435 GLLMACNHSGMVREGWWFF-NRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPV 494
Query: 526 QFQSQAWAPFLSACRTYCDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKV 585
Q W LSAC+ + VELGE A + L S +P N ++V ++NLY + W A+V
Sbjct: 495 QPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEV 554
Query: 586 RSLIDDKGLVKEPGCS 600
R + +KGL K+ GCS
Sbjct: 555 RVRMKEKGLNKDVGCS 563
HSP 2 Score: 109.0 bits (271), Expect = 1.0e-23
Identity = 69/320 (21.56%), Postives = 145/320 (45.31%), Query Frame = 1
Query: 13 ITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDG 72
+ ++ + W + + G ++LE +S MR + + +L A L + G
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQG 241
Query: 73 TMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRS 132
+HA ++ +G E + + SL MY+K + ++ +FD+ + ++I WN+MI+ Y+++
Sbjct: 242 RSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN 301
Query: 133 FRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTP 192
EA+ +F EM+ P++ + S +S A GSL Q R ++ + + DD
Sbjct: 302 GYAREAIDMFHEMINKDVRPDTISITSAISACAQV--GSLEQARSMYEYVGRSDYRDDVF 361
Query: 193 VENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNN 252
+ ++L+ M+ G ++ A VF ++ V+ W+ M+ GY G + + M +
Sbjct: 362 ISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGG 421
Query: 253 VVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSAR 312
V + F+ ++ +C G + G + + + + +I + + G L A
Sbjct: 422 VHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAY 481
Query: 313 AVFDLLS-EKSIYSWTSMIS 332
V + + + W +++S
Sbjct: 482 EVIKCMPVQPGVTVWGALLS 499
BLAST of Csa1G043310 vs. TAIR10
Match:
AT2G03380.1 (AT2G03380.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 359.0 bits (920), Expect = 5.7e-99
Identity = 203/591 (34.35%), Postives = 322/591 (54.48%), Query Frame = 1
Query: 13 ITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDG 72
I + YLW + +R + ++ Y + G ++ F LKAC L + +G
Sbjct: 102 IPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNG 161
Query: 73 TMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRS 132
+H L+ V +V V T L+DMY+K ++++ +VF++ + R+V+ W SMIA Y ++
Sbjct: 162 KKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKN 221
Query: 133 FRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTP 192
E L LF M N T+ +L+ A +L QG+ HGCL K + +
Sbjct: 222 DLCEEGLVLFNRMRENNVLGNEYTYGTLI--MACTKLSALHQGKWFHGCLVKSGIELSSC 281
Query: 193 VENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNN 252
+ SL+ MYV G I +A VF S ++ WT M+ GY G+V + F +M+
Sbjct: 282 LVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE 341
Query: 253 VVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSAR 312
+ + ++S C + NL LG S+H L +K G+ ++ + L+ MY+KC A+
Sbjct: 342 IKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAK 401
Query: 313 AVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAISACADLG 372
VF++ SEK I +W S+ISG++ G EAL LF +V PNG +A+ SACA LG
Sbjct: 402 YVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLG 461
Query: 373 SLSMRREIEAFIQQDG-LASDS-QVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSM 432
SL++ + A+ + G LAS S V T+L+ Y K G + A +F+++ ++ WS+M
Sbjct: 462 SLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAM 521
Query: 433 MNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYG 492
+ GY G ++ LF EM + KP+ S + SIL AC H+G+V +G ++F +M DY
Sbjct: 522 IGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYN 581
Query: 493 IVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVELGEVAN 552
P+ HYTC+VD+L+RAG LE AL+ I++MP Q + + FL C + +LGE+
Sbjct: 582 FTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVI 641
Query: 553 RCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQL 602
+ +L +P + +VL++NLY S G+W +A +VR+L+ +GL K G S +
Sbjct: 642 KKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTM 688
HSP 2 Score: 221.1 bits (562), Expect = 1.9e-57
Identity = 141/471 (29.94%), Postives = 233/471 (49.47%), Query Frame = 1
Query: 58 LLLKACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTR 117
LLL C N+ S+ H L G D+ + T LV +Y F + +R VFD+
Sbjct: 49 LLLSKCTNIDSLRQS---HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEP 108
Query: 118 SVISWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRL 177
W M+ Y + E +KL+ ++ GF + F L + L G+
Sbjct: 109 DFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQ--DLDNGKK 168
Query: 178 LHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGA 237
+H L K D+ V L+ MY G+I SA VF I+ + V+ WT M+ GY+K
Sbjct: 169 IHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDL 228
Query: 238 VAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCL 297
+ F++MR+NNV+ +++ + +I +C +L L G H L+K+G++ +
Sbjct: 229 CEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTS 288
Query: 298 LISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPN 357
L+ MY KCGD+ +AR VF+ S + WT+MI GY + G EALSLF ++PN
Sbjct: 289 LLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPN 348
Query: 358 GAMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFN 417
+A+ +S C + +L + R + + G+ D+ V+ +L+H+Y K A+ VF
Sbjct: 349 CVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFE 408
Query: 418 SMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVED 477
+D+ AW+S+++G++ +G + + LFH M + P+G AS+ AC+ G +
Sbjct: 409 MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAV 468
Query: 478 GLE-HFKNMQLDYGIVPTMVHY-TCLVDILSRAG---HLELALNTIQEMPT 524
G H +++L + + + VH T L+D ++ G L +TI+E T
Sbjct: 469 GSSLHAYSVKLGF-LASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNT 511
BLAST of Csa1G043310 vs. NCBI nr
Match:
gi|449439735|ref|XP_004137641.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g12770 [Cucumis sativus])
HSP 1 Score: 1200.3 bits (3104), Expect = 0.0e+00
Identity = 601/601 (100.00%), Postives = 601/601 (100.00%), Query Frame = 1
Query: 1 MQIHRFSSSSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLL 60
MQIHRFSSSSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLL
Sbjct: 1 MQIHRFSSSSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLL 60
Query: 61 KACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVI 120
KACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVI
Sbjct: 61 KACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVI 120
Query: 121 SWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHG 180
SWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHG
Sbjct: 121 SWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHG 180
Query: 181 CLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAK 240
CLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAK
Sbjct: 181 CLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAK 240
Query: 241 VFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLIS 300
VFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLIS
Sbjct: 241 VFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLIS 300
Query: 301 MYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAM 360
MYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAM
Sbjct: 301 MYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAM 360
Query: 361 LATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMI 420
LATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMI
Sbjct: 361 LATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMI 420
Query: 421 HRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLE 480
HRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLE
Sbjct: 421 HRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLE 480
Query: 481 HFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTY 540
HFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTY
Sbjct: 481 HFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTY 540
Query: 541 CDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQ 600
CDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQ
Sbjct: 541 CDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQ 600
Query: 601 L 602
L
Sbjct: 601 L 601
BLAST of Csa1G043310 vs. NCBI nr
Match:
gi|659068757|ref|XP_008446053.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Cucumis melo])
HSP 1 Score: 1155.6 bits (2988), Expect = 0.0e+00
Identity = 578/601 (96.17%), Postives = 588/601 (97.84%), Query Frame = 1
Query: 1 MQIHRFSSSSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLL 60
MQIHRFSSSSTLITKKPLYLWNLTIRSSVNGGFFAQ+LETYSFMR SGIHGNNFTFPLLL
Sbjct: 1 MQIHRFSSSSTLITKKPLYLWNLTIRSSVNGGFFAQTLETYSFMRQSGIHGNNFTFPLLL 60
Query: 61 KACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVI 120
KACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSK S+LRASRQVFDETSTRSVI
Sbjct: 61 KACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKISDLRASRQVFDETSTRSVI 120
Query: 121 SWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHG 180
WNSMIAAYSR FRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHG
Sbjct: 121 FWNSMIAAYSRGFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHG 180
Query: 181 CLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAK 240
+TKFQ HDDTPV+NSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAK
Sbjct: 181 FMTKFQFHDDTPVQNSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAK 240
Query: 241 VFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLIS 300
VFETFSQMRQNNVVLDKFVFVDIISSCIQLGNL LGSSLHSLLLKT LKY+DPIGCLLIS
Sbjct: 241 VFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLSLGSSLHSLLLKTALKYQDPIGCLLIS 300
Query: 301 MYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAM 360
MYSKCGDLLSARAVFDLLSEKSIYSWTSMIS YANAGYPREALSLF+MATQNNVRPNGAM
Sbjct: 301 MYSKCGDLLSARAVFDLLSEKSIYSWTSMISEYANAGYPREALSLFTMATQNNVRPNGAM 360
Query: 361 LATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMI 420
LATAISACADLGSLSM REIEAFIQQDGLASD QVSTSLIHLYCKFGS EKAEKVF+SMI
Sbjct: 361 LATAISACADLGSLSMLREIEAFIQQDGLASDYQVSTSLIHLYCKFGSFEKAEKVFSSMI 420
Query: 421 HRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLE 480
HRDLAAWSSMMNGYA+HGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGL+
Sbjct: 421 HRDLAAWSSMMNGYAMHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLQ 480
Query: 481 HFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTY 540
HFKNMQLDYGIVP MVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTY
Sbjct: 481 HFKNMQLDYGIVPNMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTY 540
Query: 541 CDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQ 600
CDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVK+PGCSQ
Sbjct: 541 CDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKQPGCSQ 600
Query: 601 L 602
L
Sbjct: 601 L 601
BLAST of Csa1G043310 vs. NCBI nr
Match:
gi|1009133338|ref|XP_015883847.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Ziziphus jujuba])
HSP 1 Score: 652.5 bits (1682), Expect = 7.1e-184
Identity = 317/588 (53.91%), Postives = 426/588 (72.45%), Query Frame = 1
Query: 15 KKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDGTM 74
K+PL+LWNL IR S+N G F+ +L+ Y+ M H+G+HGN+FTFPL+ KAC+NL SI
Sbjct: 6 KRPLFLWNLMIRDSINHGLFSHTLQLYASMFHTGLHGNSFTFPLVFKACSNLTSIDFAIQ 65
Query: 75 LHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFR 134
LH+H+ GF +D+FVQT+L+DMYS S L +SR+VFDE RS++SWNS+I+AYSR+FR
Sbjct: 66 LHSHVFRNGFHADLFVQTALIDMYSSCSRLGSSRKVFDEMPMRSLVSWNSIISAYSRAFR 125
Query: 135 VNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHD-DTPV 194
VNEA L +E+ G +P+SSTFVS+LSG P + SLF +HGC K L + + P+
Sbjct: 126 VNEAFLLLKEVWVLGLQPSSSTFVSILSGCCHPDNHSLFHCLSIHGCAIKLGLTNCEIPL 185
Query: 195 ENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNNV 254
NSL+ Y++FGQ+D A +F I EK++ISWT ++GGY + G V + F F+QMRQ ++
Sbjct: 186 ANSLLNAYIHFGQMDRARFIFNNIEEKSLISWTTIIGGYFRVGNVDEAFSLFNQMRQTSL 245
Query: 255 VLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSARA 314
LD +FV ++S C Q GN+ L SS+HSL+LK G E+PI LL++MY+ CGDL+SAR
Sbjct: 246 SLDSVLFVILVSGCAQEGNIILASSVHSLVLKAGSDDEEPINHLLVTMYANCGDLVSARK 305
Query: 315 VFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAISACADLGS 374
F + +++SI WTSMI GY + GYP EA +LF +P GA LA +SA ADL S
Sbjct: 306 TFHMANDRSISLWTSMIGGYTHLGYPEEAFNLFRKLLSTATKPTGATLAIILSAYADLQS 365
Query: 375 LSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNG 434
LSM +EIE +I +GL SD++V TSLIH++C+ G+I+KA ++F + ++DL WSSM+NG
Sbjct: 366 LSMGKEIEEYILMNGLGSDTRVQTSLIHMFCRCGAIKKARELFERVTNKDLVVWSSMING 425
Query: 435 YAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGIVP 494
YA HGMGE+ ++LFH MQ SGIKPD VY SIL ACSHSGLV DG+++F +MQ D+GI P
Sbjct: 426 YATHGMGEEALSLFHNMQSSGIKPDSVVYKSILTACSHSGLVADGMKYFHSMQKDFGIQP 485
Query: 495 TMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVELGEVANRCL 554
T HY CLVD+L RAG L LA+ IQEMP + Q+ AW P LSACRTYC++ELGE+A + L
Sbjct: 486 TSEHYACLVDLLGRAGQLNLAVRIIQEMPVEEQALAWGPLLSACRTYCNIELGELAAKKL 545
Query: 555 LSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQL 602
L NP + N VL+ANLYTS+GKW++AA R LI ++ L+KE G S +
Sbjct: 546 LDLNPESASNCVLVANLYTSVGKWEKAATTRRLIKEEQLIKERGWSHI 593
BLAST of Csa1G043310 vs. NCBI nr
Match:
gi|950927789|ref|XP_014495233.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Vigna radiata var. radiata])
HSP 1 Score: 651.7 bits (1680), Expect = 1.2e-183
Identity = 329/596 (55.20%), Postives = 435/596 (72.99%), Query Frame = 1
Query: 9 SSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLAS 68
SS + ++PLYLWNL IR S N GFF Q+L YS M HSG+HGNN T+PLLLKACANLAS
Sbjct: 6 SSLVSFRRPLYLWNLMIRDSTNNGFFIQTLNIYSSMAHSGVHGNNLTYPLLLKACANLAS 65
Query: 69 IGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAA 128
I GT+LH+HL+ +GF++D FVQT+LVDMYSK S++ ++R VFDE RSV+SWN+M++A
Sbjct: 66 IQHGTVLHSHLLKLGFQADAFVQTALVDMYSKSSHVESARLVFDEMPHRSVVSWNTMVSA 125
Query: 129 YSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFAD-PTHGSLFQGRLLHGCLTKFQL 188
YSR +++AL L +EM GF+P +STFVS+LSG+++ T QG +HGCL K +
Sbjct: 126 YSRVSSMDQALSLLKEMWVLGFKPTASTFVSILSGYSNVDTFKFRLQGVSIHGCLIKLGI 185
Query: 189 -HDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFS 248
+ + + NSL+ MY F ++D A VF + EK++ISWT M+GGY+K G + F F
Sbjct: 186 VNTEVSLANSLMAMYAQFCRMDEARKVFDLMDEKSIISWTTMIGGYVKIGHATEAFGLFK 245
Query: 249 QMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCG 308
QM++ +V +D VF+++IS CIQ+G L L SS+HSL+LK G + LLI+MYSKCG
Sbjct: 246 QMQRQSVGIDFVVFLNLISGCIQVGELLLASSVHSLVLKCGCDEAGSVENLLITMYSKCG 305
Query: 309 DLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAIS 368
+L AR +FDL+ EKS+ SWTSMI+GYA++G P EAL LF + ++RPNGA LAT +S
Sbjct: 306 NLTFARRIFDLIIEKSMLSWTSMIAGYAHSGLPVEALDLFRRMLKTDIRPNGATLATVLS 365
Query: 369 ACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAA 428
ACADLGSLSM +EIE ++ +G SD QV TSLIH+Y K G I+KA +VF + +DL
Sbjct: 366 ACADLGSLSMGQEIEEYVFLNGWESDQQVQTSLIHMYSKCGCIKKAREVFEKVTDKDLTV 425
Query: 429 WSSMMNGYAVHGMGEKTMNLFHEM-QRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNM 488
W+SM+N YA+HGMG + ++LFH+M GI PD VY S+LLACSHSGLVEDGL++FK+M
Sbjct: 426 WTSMINSYAIHGMGNEAISLFHKMTTEEGIIPDAIVYTSVLLACSHSGLVEDGLKYFKSM 485
Query: 489 QLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVEL 548
Q D+ I PT+ H TCL+D+L R G L+LAL+ IQ MP Q+QAW LSACR + +VEL
Sbjct: 486 QKDFRIAPTVEHCTCLIDLLGRVGQLDLALDAIQGMPLAVQAQAWGSLLSACRIHGNVEL 545
Query: 549 GEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQL 602
GE+A LL ++P ++VLM+NLYTS GKWKEA +R+LID KGLVKE G SQ+
Sbjct: 546 GELATFKLLETSPGRSGSYVLMSNLYTSSGKWKEAHMMRNLIDGKGLVKECGWSQV 601
BLAST of Csa1G043310 vs. NCBI nr
Match:
gi|356561794|ref|XP_003549163.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g19191, mitochondrial-like [Glycine max])
HSP 1 Score: 651.4 bits (1679), Expect = 1.6e-183
Identity = 325/590 (55.08%), Postives = 432/590 (73.22%), Query Frame = 1
Query: 15 KKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDGTM 74
++ LY WNL IR S N GFF Q+L YS M HSG+HGNN T+PLLLKACANL SI GTM
Sbjct: 8 RRSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTM 67
Query: 75 LHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFR 134
LH H++ +GF++D FVQT+LVDMYSK S++ ++RQVFDE RSV+SWN+M++AYSR
Sbjct: 68 LHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSS 127
Query: 135 VNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSL-FQGRLLHGCLTKFQL-HDDTP 194
+++AL L +EM GFEP +STFVS+LSG+++ G+ +H CL K + + +
Sbjct: 128 MDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVS 187
Query: 195 VENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNN 254
+ NSL+ MYV F +D A VF + EK++ISWT M+GGY+K G + + F QM+ +
Sbjct: 188 LANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQS 247
Query: 255 VVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSAR 314
V +D VF+++IS CIQ+ +L L SS+HSL+LK G +DP+ LLI+MY+KCG+L SAR
Sbjct: 248 VGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTSAR 307
Query: 315 AVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAISACADLG 374
+FDL+ EKS+ SWTSMI+GY + G+P EAL LF + ++RPNGA LAT +SACADLG
Sbjct: 308 RIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACADLG 367
Query: 375 SLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMN 434
SLS+ +EIE +I +GL SD QV TSLIH+Y K GSI KA +VF + +DL W+SM+N
Sbjct: 368 SLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWTSMIN 427
Query: 435 GYAVHGMGEKTMNLFHEMQRS-GIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGI 494
YA+HGMG + ++LFH+M + GI PD VY S+ LACSHSGLVE+GL++FK+MQ D+GI
Sbjct: 428 SYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLKYFKSMQKDFGI 487
Query: 495 VPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVELGEVANR 554
PT+ H TCL+D+L R G L+LALN IQ MP Q+Q W P LSACR + +VELGE+A
Sbjct: 488 TPTVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWGPLLSACRIHGNVELGELATV 547
Query: 555 CLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQL 602
LL S+P + ++VLMANLYTS+GKWKEA +R+ +D KGLVKE G SQ+
Sbjct: 548 RLLDSSPGSSGSYVLMANLYTSLGKWKEAHMMRNSMDGKGLVKESGWSQV 597
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
PP320_ARATH | 6.4e-100 | 33.97 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
PP390_ARATH | 1.1e-99 | 34.92 | Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana GN... | [more] |
PP175_ARATH | 7.0e-99 | 34.08 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
PP224_ARATH | 6.0e-98 | 34.71 | Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN... | [more] |
PP146_ARATH | 1.0e-97 | 34.35 | Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LT91_CUCSA | 0.0e+00 | 100.00 | Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043310 PE=4 SV=1 | [more] |
A0A0D2RDY6_GOSRA | 1.4e-183 | 54.55 | Uncharacterized protein OS=Gossypium raimondii GN=B456_005G014400 PE=4 SV=1 | [more] |
A0A0L9VHU5_PHAAN | 3.2e-183 | 54.94 | Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g052300 PE=4 SV=1 | [more] |
A0A0S3TBU1_PHAAN | 3.2e-183 | 54.94 | Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G208900 PE=... | [more] |
V7C2U8_PHAVU | 7.1e-183 | 54.87 | Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G135700g PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT4G18750.1 | 3.6e-101 | 33.97 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G16860.1 | 6.1e-101 | 34.92 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G29760.1 | 4.0e-100 | 34.08 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G12770.1 | 3.4e-99 | 34.71 | mitochondrial editing factor 22 | [more] |
AT2G03380.1 | 5.7e-99 | 34.35 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |