Csa1G043310 (gene) Cucumber (Chinese Long) v2

NameCsa1G043310
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPentatricopeptide repeat-containing protein, putative; contains IPR002885 (Pentatricopeptide repeat), IPR011990 (Tetratricopeptide-like helical)
LocationChr1 : 4849482 .. 4851465 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTAATAGACAAACAAATGCAGATTCATAGGTTCTCTTCATCTTCCACCTTGATTACCAAGAAGCCTCTTTATCTATGGAACTTGACGATTAGAAGCTCTGTCAATGGCGGGTTTTTCGCCCAATCTCTTGAAACCTACTCGTTTATGCGCCACTCTGGAATCCATGGCAACAATTTCACCTTTCCTCTCCTCCTCAAGGCTTGCGCCAATCTTGCTTCGATCGGTGATGGCACAATGCTCCACGCTCACCTCATCCATGTAGGCTTTGAATCAGACGTCTTTGTTCAAACCTCGCTCGTTGACATGTACTCCAAATTTTCTAACTTGCGTGCTTCACGCCAAGTGTTTGACGAAACGTCTACAAGAAGTGTCATTTCTTGGAATTCTATGATTGCTGCTTATTCTCGTAGTTTTCGGGTTAATGAAGCTTTAAAGCTATTCAGAGAGATGTTGGGGGGTGGATTTGAGCCAAATTCCTCAACTTTTGTAAGCTTATTGTCAGGTTTTGCTGACCCAACTCATGGATCTCTCTTTCAGGGACGTTTGCTACACGGTTGCTTAACCAAGTTTCAACTTCATGATGATACGCCTGTCGAAAATTCTCTTGTGCAAATGTACGTAAACTTTGGTCAAATCGATTCTGCTTGCTCTGTTTTTTATGCCATCAGCGAGAAGACAGTAATTTCTTGGACAATAATGCTTGGTGGTTACTTGAAAGCTGGGGCTGTTGCCAAAGTATTCGAAACCTTTAGCCAAATGAGGCAAAATAATGTCGTATTGGATAAATTTGTTTTTGTAGACATAATCTCCTCTTGTATACAACTAGGAAATTTGTTTTTAGGTTCTTCACTTCATTCCCTCCTCTTGAAAACTGGGCTCAAGTACGAGGATCCTATTGGTTGTTTGCTCATTAGCATGTATTCAAAATGTGGAGACCTCTTGTCTGCTCGAGCAGTATTTGATTTGTTATCTGAAAAAAGCATCTATTCATGGACATCAATGATAAGTGGATATGCCAATGCTGGGTATCCCAGAGAAGCATTAAGTCTATTTTCAATGGCAACACAAAATAATGTTAGACCAAATGGAGCAATGCTAGCTACTGCTATCTCTGCTTGTGCTGATTTAGGATCATTGAGCATGCGTAGGGAAATTGAGGCATTCATACAGCAGGACGGTTTAGCATCGGATAGTCAAGTTTCAACATCGTTGATACATTTGTATTGCAAATTTGGAAGTATTGAGAAGGCAGAAAAAGTTTTTAATAGTATGATACATAGAGACTTGGCAGCTTGGAGTTCCATGATGAACGGTTATGCCGTGCATGGGATGGGAGAAAAGACGATGAATCTGTTTCATGAGATGCAAAGATCAGGAATAAAACCAGATGGTTCTGTTTATGCAAGCATTTTATTGGCTTGCAGTCATTCAGGTCTAGTGGAAGATGGACTAGAGCATTTCAAGAACATGCAGTTGGATTATGGAATAGTACCTACCATGGTACACTACACTTGTTTGGTAGACATTCTAAGCCGAGCTGGTCATCTAGAATTAGCTTTGAATACAATTCAAGAGATGCCTACCCAATTTCAATCTCAAGCTTGGGCTCCTTTCCTCAGTGCTTGCAGAACTTATTGTGATGTTGAACTTGGAGAAGTTGCAAATAGATGTCTATTAAGTTCAAATCCTAGAAACCCAGTAAATCATGTTTTGATGGCTAATTTATACACATCTATGGGTAAGTGGAAAGAAGCAGCCAAAGTGAGAAGTTTGATTGATGATAAAGGTTTGGTCAAAGAACCAGGATGCAGCCAGCTTTAAATCTATGGCCCTATCCATATCATAACCGAAGAACTCCATTTTGTTCCATTGATATTTCCCATTAAAATGTGCTAATCTTCAAAAAAAAGCTTTGTGAATTGGTGGAAAATGACAAGGGGTGGCTTGGAAATGAAGGGAACAAATAAGTTTAAATGGTGGCA

mRNA sequence

ATGCAGATTCATAGGTTCTCTTCATCTTCCACCTTGATTACCAAGAAGCCTCTTTATCTATGGAACTTGACGATTAGAAGCTCTGTCAATGGCGGGTTTTTCGCCCAATCTCTTGAAACCTACTCGTTTATGCGCCACTCTGGAATCCATGGCAACAATTTCACCTTTCCTCTCCTCCTCAAGGCTTGCGCCAATCTTGCTTCGATCGGTGATGGCACAATGCTCCACGCTCACCTCATCCATGTAGGCTTTGAATCAGACGTCTTTGTTCAAACCTCGCTCGTTGACATGTACTCCAAATTTTCTAACTTGCGTGCTTCACGCCAAGTGTTTGACGAAACGTCTACAAGAAGTGTCATTTCTTGGAATTCTATGATTGCTGCTTATTCTCGTAGTTTTCGGGTTAATGAAGCTTTAAAGCTATTCAGAGAGATGTTGGGGGGTGGATTTGAGCCAAATTCCTCAACTTTTGTAAGCTTATTGTCAGGTTTTGCTGACCCAACTCATGGATCTCTCTTTCAGGGACGTTTGCTACACGGTTGCTTAACCAAGTTTCAACTTCATGATGATACGCCTGTCGAAAATTCTCTTGTGCAAATGTACGTAAACTTTGGTCAAATCGATTCTGCTTGCTCTGTTTTTTATGCCATCAGCGAGAAGACAGTAATTTCTTGGACAATAATGCTTGGTGGTTACTTGAAAGCTGGGGCTGTTGCCAAAGTATTCGAAACCTTTAGCCAAATGAGGCAAAATAATGTCGTATTGGATAAATTTGTTTTTGTAGACATAATCTCCTCTTGTATACAACTAGGAAATTTGTTTTTAGGTTCTTCACTTCATTCCCTCCTCTTGAAAACTGGGCTCAAGTACGAGGATCCTATTGGTTGTTTGCTCATTAGCATGTATTCAAAATGTGGAGACCTCTTGTCTGCTCGAGCAGTATTTGATTTGTTATCTGAAAAAAGCATCTATTCATGGACATCAATGATAAGTGGATATGCCAATGCTGGGTATCCCAGAGAAGCATTAAGTCTATTTTCAATGGCAACACAAAATAATGTTAGACCAAATGGAGCAATGCTAGCTACTGCTATCTCTGCTTGTGCTGATTTAGGATCATTGAGCATGCGTAGGGAAATTGAGGCATTCATACAGCAGGACGGTTTAGCATCGGATAGTCAAGTTTCAACATCGTTGATACATTTGTATTGCAAATTTGGAAGTATTGAGAAGGCAGAAAAAGTTTTTAATAGTATGATACATAGAGACTTGGCAGCTTGGAGTTCCATGATGAACGGTTATGCCGTGCATGGGATGGGAGAAAAGACGATGAATCTGTTTCATGAGATGCAAAGATCAGGAATAAAACCAGATGGTTCTGTTTATGCAAGCATTTTATTGGCTTGCAGTCATTCAGGTCTAGTGGAAGATGGACTAGAGCATTTCAAGAACATGCAGTTGGATTATGGAATAGTACCTACCATGGTACACTACACTTGTTTGGTAGACATTCTAAGCCGAGCTGGTCATCTAGAATTAGCTTTGAATACAATTCAAGAGATGCCTACCCAATTTCAATCTCAAGCTTGGGCTCCTTTCCTCAGTGCTTGCAGAACTTATTGTGATGTTGAACTTGGAGAAGTTGCAAATAGATGTCTATTAAGTTCAAATCCTAGAAACCCAGTAAATCATGTTTTGATGGCTAATTTATACACATCTATGGGTAAGTGGAAAGAAGCAGCCAAAGTGAGAAGTTTGATTGATGATAAAGGTTTGGTCAAAGAACCAGGATGCAGCCAGCTTTAA

Coding sequence (CDS)

ATGCAGATTCATAGGTTCTCTTCATCTTCCACCTTGATTACCAAGAAGCCTCTTTATCTATGGAACTTGACGATTAGAAGCTCTGTCAATGGCGGGTTTTTCGCCCAATCTCTTGAAACCTACTCGTTTATGCGCCACTCTGGAATCCATGGCAACAATTTCACCTTTCCTCTCCTCCTCAAGGCTTGCGCCAATCTTGCTTCGATCGGTGATGGCACAATGCTCCACGCTCACCTCATCCATGTAGGCTTTGAATCAGACGTCTTTGTTCAAACCTCGCTCGTTGACATGTACTCCAAATTTTCTAACTTGCGTGCTTCACGCCAAGTGTTTGACGAAACGTCTACAAGAAGTGTCATTTCTTGGAATTCTATGATTGCTGCTTATTCTCGTAGTTTTCGGGTTAATGAAGCTTTAAAGCTATTCAGAGAGATGTTGGGGGGTGGATTTGAGCCAAATTCCTCAACTTTTGTAAGCTTATTGTCAGGTTTTGCTGACCCAACTCATGGATCTCTCTTTCAGGGACGTTTGCTACACGGTTGCTTAACCAAGTTTCAACTTCATGATGATACGCCTGTCGAAAATTCTCTTGTGCAAATGTACGTAAACTTTGGTCAAATCGATTCTGCTTGCTCTGTTTTTTATGCCATCAGCGAGAAGACAGTAATTTCTTGGACAATAATGCTTGGTGGTTACTTGAAAGCTGGGGCTGTTGCCAAAGTATTCGAAACCTTTAGCCAAATGAGGCAAAATAATGTCGTATTGGATAAATTTGTTTTTGTAGACATAATCTCCTCTTGTATACAACTAGGAAATTTGTTTTTAGGTTCTTCACTTCATTCCCTCCTCTTGAAAACTGGGCTCAAGTACGAGGATCCTATTGGTTGTTTGCTCATTAGCATGTATTCAAAATGTGGAGACCTCTTGTCTGCTCGAGCAGTATTTGATTTGTTATCTGAAAAAAGCATCTATTCATGGACATCAATGATAAGTGGATATGCCAATGCTGGGTATCCCAGAGAAGCATTAAGTCTATTTTCAATGGCAACACAAAATAATGTTAGACCAAATGGAGCAATGCTAGCTACTGCTATCTCTGCTTGTGCTGATTTAGGATCATTGAGCATGCGTAGGGAAATTGAGGCATTCATACAGCAGGACGGTTTAGCATCGGATAGTCAAGTTTCAACATCGTTGATACATTTGTATTGCAAATTTGGAAGTATTGAGAAGGCAGAAAAAGTTTTTAATAGTATGATACATAGAGACTTGGCAGCTTGGAGTTCCATGATGAACGGTTATGCCGTGCATGGGATGGGAGAAAAGACGATGAATCTGTTTCATGAGATGCAAAGATCAGGAATAAAACCAGATGGTTCTGTTTATGCAAGCATTTTATTGGCTTGCAGTCATTCAGGTCTAGTGGAAGATGGACTAGAGCATTTCAAGAACATGCAGTTGGATTATGGAATAGTACCTACCATGGTACACTACACTTGTTTGGTAGACATTCTAAGCCGAGCTGGTCATCTAGAATTAGCTTTGAATACAATTCAAGAGATGCCTACCCAATTTCAATCTCAAGCTTGGGCTCCTTTCCTCAGTGCTTGCAGAACTTATTGTGATGTTGAACTTGGAGAAGTTGCAAATAGATGTCTATTAAGTTCAAATCCTAGAAACCCAGTAAATCATGTTTTGATGGCTAATTTATACACATCTATGGGTAAGTGGAAAGAAGCAGCCAAAGTGAGAAGTTTGATTGATGATAAAGGTTTGGTCAAAGAACCAGGATGCAGCCAGCTTTAA

Protein sequence

MQIHRFSSSSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQL*
BLAST of Csa1G043310 vs. Swiss-Prot
Match: PP320_ARATH (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana GN=DOT4 PE=2 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 6.4e-100
Identity = 197/580 (33.97%), Postives = 316/580 (54.48%), Query Frame = 1

Query: 21  WNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDGTMLHAHLI 80
           WN+ +      G F+ S+  +  M  SG+  +++TF  + K+ ++L S+  G  LH  ++
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222

Query: 81  HVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFRVNEALK 140
             GF     V  SLV  Y K   + ++R+VFDE + R VISWNS+I  Y  +    + L 
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282

Query: 141 LFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVENSLVQM 200
           +F +ML  G E + +T VS+ +G AD    SL  GR +H    K     +    N+L+ M
Sbjct: 283 VFVQMLVSGIEIDLATIVSVFAGCADSRLISL--GRAVHSIGVKACFSREDRFCNTLLDM 342

Query: 201 YVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNNVVLDKFVF 260
           Y   G +DSA +VF  +S+++V+S+T M+ GY + G   +  + F +M +  +  D +  
Sbjct: 343 YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 402

Query: 261 VDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLSE 320
             +++ C +   L  G  +H  + +  L ++  +   L+ MY+KCG +  A  VF  +  
Sbjct: 403 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 462

Query: 321 KSIYSWTSMISGYANAGYPREALSLFSMATQNN-VRPNGAMLATAISACADLGSLSMRRE 380
           K I SW ++I GY+   Y  EALSLF++  +     P+   +A  + ACA L +    RE
Sbjct: 463 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGRE 522

Query: 381 IEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGM 440
           I  +I ++G  SD  V+ SL+ +Y K G++  A  +F+ +  +DL +W+ M+ GY +HG 
Sbjct: 523 IHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGF 582

Query: 441 GEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGIVPTMVHYT 500
           G++ + LF++M+++GI+ D   + S+L ACSHSGLV++G   F  M+ +  I PT+ HY 
Sbjct: 583 GKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYA 642

Query: 501 CLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVELGEVANRCLLSSNPR 560
           C+VD+L+R G L  A   I+ MP    +  W   L  CR + DV+L E     +    P 
Sbjct: 643 CIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPE 702

Query: 561 NPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCS 600
           N   +VLMAN+Y    KW++  ++R  I  +GL K PGCS
Sbjct: 703 NTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 740


HSP 2 Score: 225.7 bits (574), Expect = 1.3e-57
Identity = 138/457 (30.20%), Postives = 235/457 (51.42%), Query Frame = 1

Query: 59  LLKACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRS 118
           +L+ CA+  S+ DG  +   +   GF  D  + + L  MY+   +L+ + +VFDE     
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK 159

Query: 119 VISWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLL 178
            + WN ++   ++S   + ++ LF++M+  G E +S TF  +   F+     S+  G  L
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR--SVHGGEQL 219

Query: 179 HGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAV 238
           HG + K    +   V NSLV  Y+   ++DSA  VF  ++E+ VISW  ++ GY+  G  
Sbjct: 220 HGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLA 279

Query: 239 AKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLL 298
            K    F QM  + + +D    V + + C     + LG ++HS+ +K     ED     L
Sbjct: 280 EKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTL 339

Query: 299 ISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNG 358
           + MYSKCGDL SA+AVF  +S++S+ S+TSMI+GYA  G   EA+ LF    +  + P+ 
Sbjct: 340 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDV 399

Query: 359 AMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNS 418
             +   ++ CA    L   + +  +I+++ L  D  VS +L+ +Y K GS+++AE VF+ 
Sbjct: 400 YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSE 459

Query: 419 MIHRDLAAWSSMMNGYAVHGMGEKTMNLFH-EMQRSGIKPDGSVYASILLACSHSGLVED 478
           M  +D+ +W++++ GY+ +    + ++LF+  ++     PD    A +L AC+     + 
Sbjct: 460 MRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDK 519

Query: 479 GLEHFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELA 515
           G E      +  G          LVD+ ++ G L LA
Sbjct: 520 GRE-IHGYIMRNGYFSDRHVANSLVDMYAKCGALLLA 553


HSP 3 Score: 166.0 bits (419), Expect = 1.3e-39
Identity = 111/425 (26.12%), Postives = 203/425 (47.76%), Query Frame = 1

Query: 102 SNLRASRQVFDETST--RSVISWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVS 161
           ++LR      D  +T  RSV   N+ +  +  S  +  A+KL    + G ++ +  T  S
Sbjct: 42  ASLRTVSDCVDSITTFDRSVTDANTQLRRFCESGNLENAVKLL--CVSGKWDIDPRTLCS 101

Query: 162 LLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISE 221
           +L   AD    SL  G+ +   +       D+ + + L  MY N G +  A  VF  +  
Sbjct: 102 VLQLCADSK--SLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKI 161

Query: 222 KTVISWTIMLGGYLKAGAVAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSL 281
           +  + W I++    K+G  +     F +M  + V +D + F  +  S   L ++  G  L
Sbjct: 162 EKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQL 221

Query: 282 HSLLLKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYP 341
           H  +LK+G    + +G  L++ Y K   + SAR VFD ++E+ + SW S+I+GY + G  
Sbjct: 222 HGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLA 281

Query: 342 REALSLFSMATQNNVRPNGAMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSL 401
            + LS+F     + +  + A + +  + CAD   +S+ R + +   +   + + +   +L
Sbjct: 282 EKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTL 341

Query: 402 IHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDG 461
           + +Y K G ++ A+ VF  M  R + +++SM+ GYA  G+  + + LF EM+  GI PD 
Sbjct: 342 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDV 401

Query: 462 SVYASILLACSHSGLVEDGL---EHFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALN 521
               ++L  C+   L+++G    E  K   L + I  +      L+D+ ++ G ++ A  
Sbjct: 402 YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS----NALMDMYAKCGSMQEAEL 458

BLAST of Csa1G043310 vs. Swiss-Prot
Match: PP390_ARATH (Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.1e-99
Identity = 220/630 (34.92%), Postives = 330/630 (52.38%), Query Frame = 1

Query: 18  LYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDGTMLHA 77
           +Y WN  IRS  + G   + L  +  M       +N+TFP + KAC  ++S+  G   HA
Sbjct: 92  VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151

Query: 78  HLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFRVNE 137
             +  GF S+VFV  +LV MYS+  +L  +R+VFDE S   V+SWNS+I +Y++  +   
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV 211

Query: 138 ALKLFREMLGG-GFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVENS 197
           AL++F  M    G  P++ T V++L   A     SL  G+ LH      ++  +  V N 
Sbjct: 212 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSL--GKQLHCFAVTSEMIQNMFVGNC 271

Query: 198 LVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGA---VAKVFETFS------- 257
           LV MY   G +D A +VF  +S K V+SW  M+ GY + G      ++FE          
Sbjct: 272 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 331

Query: 258 -------------------------QMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHS 317
                                    QM  + +  ++   + ++S C  +G L  G  +H 
Sbjct: 332 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 391

Query: 318 L-------LLKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLS--EKSIYSWTSMISG 377
                   L K G   E+ +   LI MY+KC  + +ARA+FD LS  E+ + +WT MI G
Sbjct: 392 YAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGG 451

Query: 378 YANAGYPREALSLFSMATQNN--VRPNGAMLATAISACADLGSLSMRREIEAF-IQQDGL 437
           Y+  G   +AL L S   + +   RPN   ++ A+ ACA L +L + ++I A+ ++    
Sbjct: 452 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQN 511

Query: 438 ASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHE 497
           A    VS  LI +Y K GSI  A  VF++M+ ++   W+S+M GY +HG GE+ + +F E
Sbjct: 512 AVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDE 571

Query: 498 MQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGIVPTMVHYTCLVDILSRAG 557
           M+R G K DG     +L ACSHSG+++ G+E+F  M+  +G+ P   HY CLVD+L RAG
Sbjct: 572 MRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAG 631

Query: 558 HLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVELGEVANRCLLSSNPRNPVNHVLMAN 600
            L  AL  I+EMP +     W  FLS CR +  VELGE A   +      +  ++ L++N
Sbjct: 632 RLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSN 691


HSP 2 Score: 152.1 bits (383), Expect = 1.9e-35
Identity = 98/339 (28.91%), Postives = 165/339 (48.67%), Query Frame = 1

Query: 171 SLFQGRLLHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVF--YAISEKTVISWTIM 230
           ++ Q +L+H  L  F +     + + L+  Y++ G +  A S+   +  S+  V  W  +
Sbjct: 40  TISQVKLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSL 99

Query: 231 LGGYLKAGAVAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGL 290
           +  Y   G   K    F  M   +   D + F  +  +C ++ ++  G S H+L L TG 
Sbjct: 100 IRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGF 159

Query: 291 KYEDPIGCLLISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFS- 350
                +G  L++MYS+C  L  AR VFD +S   + SW S+I  YA  G P+ AL +FS 
Sbjct: 160 ISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSR 219

Query: 351 MATQNNVRPNGAMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFG 410
           M  +   RP+   L   +  CA LG+ S+ +++  F     +  +  V   L+ +Y K G
Sbjct: 220 MTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCG 279

Query: 411 SIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILL 470
            +++A  VF++M  +D+ +W++M+ GY+  G  E  + LF +MQ   IK D   +++ + 
Sbjct: 280 MMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAIS 339

Query: 471 ACSHSGLVEDGLEHFKNMQLDYGIVPTMVHYTCLVDILS 507
             +  GL  + L   + M L  GI P  V    L+ +LS
Sbjct: 340 GYAQRGLGYEALGVCRQM-LSSGIKPNEV---TLISVLS 373

BLAST of Csa1G043310 vs. Swiss-Prot
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 7.0e-99
Identity = 197/578 (34.08%), Postives = 318/578 (55.02%), Query Frame = 1

Query: 59  LLKACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDM--YSKFSNLRASRQVFDETST 118
           L++ C +L  +      H H+I  G  SD +  + L  M   S F++L  +R+VFDE   
Sbjct: 36  LIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPK 95

Query: 119 RSVISWNSMIAAYSRSFRVNEALKLFREMLGGG-FEPNSSTFVSLLSGFADPTHGSLFQG 178
            +  +WN++I AY+       ++  F +M+      PN  TF  L+   A+ +  SL  G
Sbjct: 96  PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVS--SLSLG 155

Query: 179 RLLHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKA 238
           + LHG   K  +  D  V NSL+  Y + G +DSAC VF  I EK V+SW  M+ G+++ 
Sbjct: 156 QSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 215

Query: 239 GAVAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIG 298
           G+  K  E F +M   +V       V ++S+C ++ NL  G  + S + +  +     + 
Sbjct: 216 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLA 275

Query: 299 CLLISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYA--------------------- 358
             ++ MY+KCG +  A+ +FD + EK   +WT+M+ GYA                     
Sbjct: 276 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIV 335

Query: 359 --NA--------GYPREALSLF-SMATQNNVRPNGAMLATAISACADLGSLSMRREIEAF 418
             NA        G P EAL +F  +  Q N++ N   L + +SACA +G+L + R I ++
Sbjct: 336 AWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSY 395

Query: 419 IQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGMGEKT 478
           I++ G+  +  V+++LIH+Y K G +EK+ +VFNS+  RD+  WS+M+ G A+HG G + 
Sbjct: 396 IKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEA 455

Query: 479 MNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGIVPTMVHYTCLVD 538
           +++F++MQ + +KP+G  + ++  ACSH+GLV++    F  M+ +YGIVP   HY C+VD
Sbjct: 456 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVD 515

Query: 539 ILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVELGEVANRCLLSSNPRNPVN 598
           +L R+G+LE A+  I+ MP    +  W   L AC+ + ++ L E+A   LL   PRN   
Sbjct: 516 VLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGA 575

Query: 599 HVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQL 602
           HVL++N+Y  +GKW+  +++R  +   GL KEPGCS +
Sbjct: 576 HVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSI 608


HSP 2 Score: 150.2 bits (378), Expect = 7.2e-35
Identity = 122/471 (25.90%), Postives = 207/471 (43.95%), Query Frame = 1

Query: 13  ITKKPLYLWNLTIRSSVNGGFFAQSLETY-SFMRHSGIHGNNFTFPLLLKACANLASIGD 72
           I K   + WN  IR+  +G     S+  +   +  S  + N +TFP L+KA A ++S+  
Sbjct: 90  IPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSL 149

Query: 73  GTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSR 132
           G  LH   +     SDVFV  SL+  Y    +L ++ +VF     + V+SWNSMI  + +
Sbjct: 150 GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 209

Query: 133 SFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDT 192
               ++AL+LF++M     + +  T V +LS  A     +L  GR +   + + +++ + 
Sbjct: 210 KGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIR--NLEFGRQVCSYIEENRVNVNL 269

Query: 193 PVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQN 252
            + N+++ MY   G I+ A  +F A+ EK  ++WT ML GY  +       E  + M Q 
Sbjct: 270 TLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK 329

Query: 253 NVVLDKFVFVDIISSCIQLG--NLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKC---- 312
           ++V     +  +IS+  Q G  N  L    H L L+  +K        L+S  S C    
Sbjct: 330 DIV----AWNALISAYEQNGKPNEAL-IVFHELQLQKNMKLNQ---ITLVSTLSACAQVG 389

Query: 313 ----------------------------------GDLLSARAVFDLLSEKSIYSWTSMIS 372
                                             GDL  +R VF+ + ++ ++ W++MI 
Sbjct: 390 ALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIG 449

Query: 373 GYANAGYPREALSLFSMATQNNVRPNGAMLATAISACADLGSLSMRREIEAFIQQ----D 432
           G A  G   EA+ +F    + NV+PNG        AC+  G +    E E+   Q     
Sbjct: 450 GLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVD---EAESLFHQMESNY 509

Query: 433 GLASDSQVSTSLIHLYCKFGSIEKAEKVFNSM-IHRDLAAWSSMMNGYAVH 438
           G+  + +    ++ +  + G +EKA K   +M I    + W +++    +H
Sbjct: 510 GIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIH 547


HSP 3 Score: 104.8 bits (260), Expect = 3.5e-21
Identity = 101/421 (23.99%), Postives = 182/421 (43.23%), Query Frame = 1

Query: 85  ESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFRVNEALKLFRE 144
           E D    T+++D Y+   +  A+R+V +    + +++WN++I+AY ++ + NEAL +F E
Sbjct: 295 EKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHE 354

Query: 145 M-LGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVENSLVQMYVN 204
           + L    + N  T VS LS  A    G+L  GR +H  + K  +  +  V ++L+ MY  
Sbjct: 355 LQLQKNMKLNQITLVSTLSACAQV--GALELGRWIHSYIKKHGIRMNFHVTSALIHMYSK 414

Query: 205 FGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNNVVLDKFVFVDI 264
            G ++ +  VF ++ ++ V  W+ M+GG    G   +  + F +M++ NV  +   F ++
Sbjct: 415 CGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNV 474

Query: 265 ISSCIQLGNLFLGSSL-HSLLLKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLSEKS 324
             +C   G +    SL H +    G+  E+     ++ +  + G L  A      +    
Sbjct: 475 FCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKA---VKFIEAMP 534

Query: 325 IYSWTSMISGYANAGYPREALSLFSMA----TQNNVRPNGAMLATAISACADLGSLSMRR 384
           I   TS+      A      L+L  MA     +   R +GA +  + +  A LG      
Sbjct: 535 IPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLS-NIYAKLGKWENVS 594

Query: 385 EIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHG 444
           E+   ++  GL  +   S           SIE      + MIH         ++G   H 
Sbjct: 595 ELRKHMRVTGLKKEPGCS-----------SIE-----IDGMIH-------EFLSGDNAHP 654

Query: 445 MGEKTMNLFHE----MQRSGIKPDGSVYASILLACSHSGLVEDGLE-HFKNMQLDYGIVP 495
           M EK     HE    ++ +G +P+    + +L       + E  L  H + + + YG++ 
Sbjct: 655 MSEKVYGKLHEVMEKLKSNGYEPE---ISQVLQIIEEEEMKEQSLNLHSEKLAICYGLIS 683

BLAST of Csa1G043310 vs. Swiss-Prot
Match: PP224_ARATH (Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 6.0e-98
Identity = 193/556 (34.71%), Postives = 314/556 (56.47%), Query Frame = 1

Query: 46  HSGIHGNNFTFPLLLKACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLR 105
           +SGIH ++F +  L+ +  + A +     +HA L+ +G +   F+ T L+   S F ++ 
Sbjct: 15  NSGIHSDSF-YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDIT 74

Query: 106 ASRQVFDETSTRSVISWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFA 165
            +RQVFD+     +  WN++I  YSR+    +AL ++  M      P+S TF  LL   +
Sbjct: 75  FARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS 134

Query: 166 DPTHGSLFQGRLLHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAIS--EKTVI 225
             +H  L  GR +H  + +     D  V+N L+ +Y    ++ SA +VF  +   E+T++
Sbjct: 135 GLSH--LQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIV 194

Query: 226 SWTIMLGGYLKAGAVAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLL 285
           SWT ++  Y + G   +  E FSQMR+ +V  D    V ++++   L +L  G S+H+ +
Sbjct: 195 SWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASV 254

Query: 286 LKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREAL 345
           +K GL+ E  +   L +MY+KCG + +A+ +FD +   ++  W +MISGYA  GY REA+
Sbjct: 255 VKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAI 314

Query: 346 SLFSMATQNNVRPNGAMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLY 405
            +F      +VRP+   + +AISACA +GSL   R +  ++ +     D  +S++LI ++
Sbjct: 315 DMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMF 374

Query: 406 CKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYA 465
            K GS+E A  VF+  + RD+  WS+M+ GY +HG   + ++L+  M+R G+ P+   + 
Sbjct: 375 AKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFL 434

Query: 466 SILLACSHSGLVEDGLEHFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPT 525
            +L+AC+HSG+V +G   F N   D+ I P   HY C++D+L RAGHL+ A   I+ MP 
Sbjct: 435 GLLMACNHSGMVREGWWFF-NRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPV 494

Query: 526 QFQSQAWAPFLSACRTYCDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKV 585
           Q     W   LSAC+ +  VELGE A + L S +P N  ++V ++NLY +   W   A+V
Sbjct: 495 QPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEV 554

Query: 586 RSLIDDKGLVKEPGCS 600
           R  + +KGL K+ GCS
Sbjct: 555 RVRMKEKGLNKDVGCS 563


HSP 2 Score: 109.0 bits (271), Expect = 1.8e-22
Identity = 69/320 (21.56%), Postives = 145/320 (45.31%), Query Frame = 1

Query: 13  ITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDG 72
           + ++ +  W   + +    G   ++LE +S MR   +  +      +L A   L  +  G
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQG 241

Query: 73  TMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRS 132
             +HA ++ +G E +  +  SL  MY+K   +  ++ +FD+  + ++I WN+MI+ Y+++
Sbjct: 242 RSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN 301

Query: 133 FRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTP 192
               EA+ +F EM+     P++ +  S +S  A    GSL Q R ++  + +    DD  
Sbjct: 302 GYAREAIDMFHEMINKDVRPDTISITSAISACAQV--GSLEQARSMYEYVGRSDYRDDVF 361

Query: 193 VENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNN 252
           + ++L+ M+   G ++ A  VF    ++ V+ W+ M+ GY   G   +    +  M +  
Sbjct: 362 ISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGG 421

Query: 253 VVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSAR 312
           V  +   F+ ++ +C   G +  G    + +    +  +      +I +  + G L  A 
Sbjct: 422 VHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAY 481

Query: 313 AVFDLLS-EKSIYSWTSMIS 332
            V   +  +  +  W +++S
Sbjct: 482 EVIKCMPVQPGVTVWGALLS 499

BLAST of Csa1G043310 vs. Swiss-Prot
Match: PP146_ARATH (Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.0e-97
Identity = 203/591 (34.35%), Postives = 322/591 (54.48%), Query Frame = 1

Query: 13  ITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDG 72
           I +   YLW + +R         + ++ Y  +   G   ++  F   LKAC  L  + +G
Sbjct: 102 IPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNG 161

Query: 73  TMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRS 132
             +H  L+ V    +V V T L+DMY+K   ++++ +VF++ + R+V+ W SMIA Y ++
Sbjct: 162 KKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKN 221

Query: 133 FRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTP 192
               E L LF  M       N  T+ +L+   A     +L QG+  HGCL K  +   + 
Sbjct: 222 DLCEEGLVLFNRMRENNVLGNEYTYGTLI--MACTKLSALHQGKWFHGCLVKSGIELSSC 281

Query: 193 VENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNN 252
           +  SL+ MYV  G I +A  VF   S   ++ WT M+ GY   G+V +    F +M+   
Sbjct: 282 LVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE 341

Query: 253 VVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSAR 312
           +  +      ++S C  + NL LG S+H L +K G+ ++  +   L+ MY+KC     A+
Sbjct: 342 IKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAK 401

Query: 313 AVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAISACADLG 372
            VF++ SEK I +W S+ISG++  G   EAL LF      +V PNG  +A+  SACA LG
Sbjct: 402 YVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLG 461

Query: 373 SLSMRREIEAFIQQDG-LASDS-QVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSM 432
           SL++   + A+  + G LAS S  V T+L+  Y K G  + A  +F+++  ++   WS+M
Sbjct: 462 SLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAM 521

Query: 433 MNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYG 492
           + GY   G    ++ LF EM +   KP+ S + SIL AC H+G+V +G ++F +M  DY 
Sbjct: 522 IGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYN 581

Query: 493 IVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVELGEVAN 552
             P+  HYTC+VD+L+RAG LE AL+ I++MP Q   + +  FL  C  +   +LGE+  
Sbjct: 582 FTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVI 641

Query: 553 RCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQL 602
           + +L  +P +   +VL++NLY S G+W +A +VR+L+  +GL K  G S +
Sbjct: 642 KKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTM 688


HSP 2 Score: 221.1 bits (562), Expect = 3.3e-56
Identity = 141/471 (29.94%), Postives = 233/471 (49.47%), Query Frame = 1

Query: 58  LLLKACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTR 117
           LLL  C N+ S+      H  L   G   D+ + T LV +Y  F   + +R VFD+    
Sbjct: 49  LLLSKCTNIDSLRQS---HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEP 108

Query: 118 SVISWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRL 177
               W  M+  Y  +    E +KL+  ++  GF  +   F   L    +     L  G+ 
Sbjct: 109 DFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQ--DLDNGKK 168

Query: 178 LHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGA 237
           +H  L K    D+  V   L+ MY   G+I SA  VF  I+ + V+ WT M+ GY+K   
Sbjct: 169 IHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDL 228

Query: 238 VAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCL 297
             +    F++MR+NNV+ +++ +  +I +C +L  L  G   H  L+K+G++    +   
Sbjct: 229 CEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTS 288

Query: 298 LISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPN 357
           L+ MY KCGD+ +AR VF+  S   +  WT+MI GY + G   EALSLF       ++PN
Sbjct: 289 LLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPN 348

Query: 358 GAMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFN 417
              +A+ +S C  + +L + R +     + G+  D+ V+ +L+H+Y K      A+ VF 
Sbjct: 349 CVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFE 408

Query: 418 SMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVED 477
               +D+ AW+S+++G++ +G   + + LFH M    + P+G   AS+  AC+  G +  
Sbjct: 409 MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAV 468

Query: 478 GLE-HFKNMQLDYGIVPTMVHY-TCLVDILSRAG---HLELALNTIQEMPT 524
           G   H  +++L + +  + VH  T L+D  ++ G      L  +TI+E  T
Sbjct: 469 GSSLHAYSVKLGF-LASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNT 511

BLAST of Csa1G043310 vs. TrEMBL
Match: A0A0A0LT91_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043310 PE=4 SV=1)

HSP 1 Score: 1200.3 bits (3104), Expect = 0.0e+00
Identity = 601/601 (100.00%), Postives = 601/601 (100.00%), Query Frame = 1

Query: 1   MQIHRFSSSSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLL 60
           MQIHRFSSSSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLL
Sbjct: 1   MQIHRFSSSSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLL 60

Query: 61  KACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVI 120
           KACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVI
Sbjct: 61  KACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVI 120

Query: 121 SWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHG 180
           SWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHG
Sbjct: 121 SWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHG 180

Query: 181 CLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAK 240
           CLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAK
Sbjct: 181 CLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAK 240

Query: 241 VFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLIS 300
           VFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLIS
Sbjct: 241 VFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLIS 300

Query: 301 MYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAM 360
           MYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAM
Sbjct: 301 MYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAM 360

Query: 361 LATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMI 420
           LATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMI
Sbjct: 361 LATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMI 420

Query: 421 HRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLE 480
           HRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLE
Sbjct: 421 HRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLE 480

Query: 481 HFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTY 540
           HFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTY
Sbjct: 481 HFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTY 540

Query: 541 CDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQ 600
           CDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQ
Sbjct: 541 CDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQ 600

Query: 601 L 602
           L
Sbjct: 601 L 601

BLAST of Csa1G043310 vs. TrEMBL
Match: A0A0D2RDY6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G014400 PE=4 SV=1)

HSP 1 Score: 651.0 bits (1678), Expect = 1.4e-183
Identity = 330/605 (54.55%), Postives = 440/605 (72.73%), Query Frame = 1

Query: 3   IHRFSSSSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFM-RHSGIHGNNFTFPLLLK 62
           +  F  +S    K+PLYL+NL IR+S N G FA +L+ YS M R + +HGN+FTFPLL K
Sbjct: 1   MRHFPLNSITSKKRPLYLFNLKIRNSTNNGDFADTLKIYSSMLRDTPVHGNSFTFPLLFK 60

Query: 63  ACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVIS 122
           ACA+L S+ DGT LHAH++ +GF+ D+FVQTSL+DMYSK S+L ++R VFDE   R+V+ 
Sbjct: 61  ACASLNSLHDGTKLHAHVLQLGFQQDIFVQTSLLDMYSKCSDLASARNVFDEMVMRNVVC 120

Query: 123 WNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGC 182
           WN+MI+AY R FRV EA+ L +EM   GFE N+STFVS+++   +     L  G  +H C
Sbjct: 121 WNTMISAYCRCFRVMEAMNLLKEMWVIGFELNASTFVSVIAACTN-----LRLGLSMHCC 180

Query: 183 LTKFQL-HDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAK 242
           + K  L H + P+ NS+V MYV FG ID A S+F  + E++++SWT ++GGY+  G V +
Sbjct: 181 VFKLGLLHCEIPLANSVVNMYVKFGLIDDARSIFDTVDERSILSWTTIIGGYVSVGNVGE 240

Query: 243 VFETFSQMRQNNVVL-DKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLI 302
            F  F++MRQ   V  D  +FV IIS C++ GNL L SS+HSL+LK+G   E  I   ++
Sbjct: 241 AFNLFNRMRQMGCVSQDMVLFVKIISGCVKSGNLLLASSVHSLVLKSGFHGEASIDNSVL 300

Query: 303 SMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGA 362
           +MYSKCGD++SAR VF+++ EK I+ WTSMI+     GYP EAL LF    + +++PN A
Sbjct: 301 NMYSKCGDIVSARRVFEMVDEKCIFLWTSMIAANTQHGYPAEALDLFKSLLRTDLKPNEA 360

Query: 363 MLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSM 422
            +A+ +SACADLGSLS+  EIE +++ +GLAS+ QV TSLIH+YCK G I+KAE+VF  +
Sbjct: 361 TIASILSACADLGSLSIGNEIEHYVKLNGLASNQQVQTSLIHMYCKCGRIDKAEEVFAGV 420

Query: 423 IHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKP---DGSVYASILLACSHSGLVE 482
           +H+DLA WSSM+NGYA+HGMG + + LFH MQ +  KP   D  V+ SILLACSHSGLVE
Sbjct: 421 LHKDLAVWSSMINGYAIHGMGNEALKLFHRMQIT--KPCSLDHVVFTSILLACSHSGLVE 480

Query: 483 DGLEHFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSA 542
           DGL+++K+M+ DYGI P + HYTCLVD+L RAGH +LAL TIQEMP Q Q+Q WAP LS+
Sbjct: 481 DGLKYYKSMKDDYGIEPGIEHYTCLVDLLGRAGHFDLALKTIQEMPLQVQAQVWAPLLSS 540

Query: 543 CRTYCDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEP 602
           CR +C +ELGE   + LL  NP N  ++VLMAN+YTS GKWKEAAK RS++ +KGLVKEP
Sbjct: 541 CRKHCKIELGEYVAKKLLDLNPGNTSSYVLMANIYTSAGKWKEAAKTRSMMRNKGLVKEP 598

BLAST of Csa1G043310 vs. TrEMBL
Match: A0A0L9VHU5_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g052300 PE=4 SV=1)

HSP 1 Score: 649.8 bits (1675), Expect = 3.2e-183
Identity = 328/597 (54.94%), Postives = 433/597 (72.53%), Query Frame = 1

Query: 8   SSSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLA 67
           SSS +  ++PLYLWNL IR S N GFF Q+L  Y  M HSG+HGNN T+PLLLKACANLA
Sbjct: 5   SSSLVSFRRPLYLWNLMIRDSTNNGFFIQTLNIYFSMAHSGVHGNNLTYPLLLKACANLA 64

Query: 68  SIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIA 127
           SI  GT+LH H++ +GF++D FVQT+LVDMYSK S++ ++R VFDE   R+V+SWN+M++
Sbjct: 65  SIQHGTVLHGHVLKLGFQADAFVQTALVDMYSKSSHVESARLVFDEMPHRTVVSWNTMVS 124

Query: 128 AYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFAD-PTHGSLFQGRLLHGCLTKFQ 187
           AYSR   +++AL L +EM   GF+P +STFVS+LSG+++  T     QG  +H CL K  
Sbjct: 125 AYSRVSSMDQALSLLKEMGVLGFKPTASTFVSILSGYSNLDTFKFRLQGVSIHSCLIKLG 184

Query: 188 L-HDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETF 247
           + H +  + NSL+ MY  F ++D A  VF  + EK++ISWT M+GGY+K G  A+ F  F
Sbjct: 185 IVHREVSLANSLMAMYAQFCRMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAAEAFGLF 244

Query: 248 SQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKC 307
            QM + +V +D  VF+++IS CIQ+G L L SS+HSL+LK G    D +  LLI+MYSKC
Sbjct: 245 KQMLRQSVGIDFVVFLNLISGCIQVGELLLASSVHSLVLKCGCDEADSVENLLITMYSKC 304

Query: 308 GDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAI 367
           G+L  AR +FDL+ EKS+ SWTSMI+GY ++G+P EAL LF    + + RPNGA LAT +
Sbjct: 305 GNLTFARRIFDLIIEKSMLSWTSMIAGYVHSGHPVEALDLFRRMVKTDTRPNGATLATVL 364

Query: 368 SACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLA 427
           SACADLGSLSM +EIE ++   G  S+ QV TSLIH+Y K GSI+KA +VF  +  +DL 
Sbjct: 365 SACADLGSLSMGQEIEEYVFLHGWESEQQVQTSLIHMYSKCGSIKKAREVFEKVTDKDLT 424

Query: 428 AWSSMMNGYAVHGMGEKTMNLFHEM-QRSGIKPDGSVYASILLACSHSGLVEDGLEHFKN 487
            W+SM+N YA+HGMG + + LFH+M    GI PD  VY S+LLACSHSGLVEDGL++FK+
Sbjct: 425 VWTSMINSYAIHGMGNEAITLFHKMTTEEGIIPDAIVYTSVLLACSHSGLVEDGLKYFKS 484

Query: 488 MQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVE 547
           MQ D+ I PT+ H TCL+D+L R G L+LAL+ IQ MP   Q+QAW   LSACR + +VE
Sbjct: 485 MQKDFKIAPTVEHCTCLIDLLGRVGQLDLALDAIQGMPLAVQAQAWGSLLSACRIHGNVE 544

Query: 548 LGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQL 602
           LGE+A   LL ++P    ++VLM+NLYTS+GKWKEA  +R+LID KGLVKE G SQ+
Sbjct: 545 LGELATFKLLETSPGRSGSYVLMSNLYTSLGKWKEAHMMRNLIDGKGLVKECGWSQV 601

BLAST of Csa1G043310 vs. TrEMBL
Match: A0A0S3TBU1_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G208900 PE=4 SV=1)

HSP 1 Score: 649.8 bits (1675), Expect = 3.2e-183
Identity = 328/597 (54.94%), Postives = 433/597 (72.53%), Query Frame = 1

Query: 8   SSSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLA 67
           SSS +  ++PLYLWNL IR S N GFF Q+L  Y  M HSG+HGNN T+PLLLKACANLA
Sbjct: 5   SSSLVSFRRPLYLWNLMIRDSTNNGFFIQTLNIYFSMAHSGVHGNNLTYPLLLKACANLA 64

Query: 68  SIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIA 127
           SI  GT+LH H++ +GF++D FVQT+LVDMYSK S++ ++R VFDE   R+V+SWN+M++
Sbjct: 65  SIQHGTVLHGHVLKLGFQADAFVQTALVDMYSKSSHVESARLVFDEMPHRTVVSWNTMVS 124

Query: 128 AYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFAD-PTHGSLFQGRLLHGCLTKFQ 187
           AYSR   +++AL L +EM   GF+P +STFVS+LSG+++  T     QG  +H CL K  
Sbjct: 125 AYSRVSSMDQALSLLKEMGVLGFKPTASTFVSILSGYSNLDTFKFRLQGVSIHSCLIKLG 184

Query: 188 L-HDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETF 247
           + H +  + NSL+ MY  F ++D A  VF  + EK++ISWT M+GGY+K G  A+ F  F
Sbjct: 185 IVHREVSLANSLMAMYAQFCRMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAAEAFGLF 244

Query: 248 SQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKC 307
            QM + +V +D  VF+++IS CIQ+G L L SS+HSL+LK G    D +  LLI+MYSKC
Sbjct: 245 KQMLRQSVGIDFVVFLNLISGCIQVGELLLASSVHSLVLKCGCDEADSVENLLITMYSKC 304

Query: 308 GDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAI 367
           G+L  AR +FDL+ EKS+ SWTSMI+GY ++G+P EAL LF    + + RPNGA LAT +
Sbjct: 305 GNLTFARRIFDLIIEKSMLSWTSMIAGYVHSGHPVEALDLFRRMVKTDTRPNGATLATVL 364

Query: 368 SACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLA 427
           SACADLGSLSM +EIE ++   G  S+ QV TSLIH+Y K GSI+KA +VF  +  +DL 
Sbjct: 365 SACADLGSLSMGQEIEEYVFLHGWESEQQVQTSLIHMYSKCGSIKKAREVFEKVTDKDLT 424

Query: 428 AWSSMMNGYAVHGMGEKTMNLFHEM-QRSGIKPDGSVYASILLACSHSGLVEDGLEHFKN 487
            W+SM+N YA+HGMG + + LFH+M    GI PD  VY S+LLACSHSGLVEDGL++FK+
Sbjct: 425 VWTSMINSYAIHGMGNEAITLFHKMTTEEGIIPDAIVYTSVLLACSHSGLVEDGLKYFKS 484

Query: 488 MQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVE 547
           MQ D+ I PT+ H TCL+D+L R G L+LAL+ IQ MP   Q+QAW   LSACR + +VE
Sbjct: 485 MQKDFKIAPTVEHCTCLIDLLGRVGQLDLALDAIQGMPLAVQAQAWGSLLSACRIHGNVE 544

Query: 548 LGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQL 602
           LGE+A   LL ++P    ++VLM+NLYTS+GKWKEA  +R+LID KGLVKE G SQ+
Sbjct: 545 LGELATFKLLETSPGRSGSYVLMSNLYTSLGKWKEAHMMRNLIDGKGLVKECGWSQV 601

BLAST of Csa1G043310 vs. TrEMBL
Match: V7C2U8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G135700g PE=4 SV=1)

HSP 1 Score: 648.7 bits (1672), Expect = 7.1e-183
Identity = 327/596 (54.87%), Postives = 431/596 (72.32%), Query Frame = 1

Query: 9   SSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLAS 68
           SS    ++PLYLWNL IR S N GFF Q+L  YS M HSG+HGNN T+PLLLKACANLAS
Sbjct: 6   SSLASFRRPLYLWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLAS 65

Query: 69  IGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAA 128
           I  GT+LH H++ +GF+ D FVQT+LVDMYSK S++ ++R VFDE   RSV+SWN+M++A
Sbjct: 66  IQHGTVLHGHVLKLGFQEDTFVQTALVDMYSKCSHVASARLVFDEMPQRSVVSWNAMVSA 125

Query: 129 YSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFAD-PTHGSLFQGRLLHGCLTKFQL 188
           YSR   +++AL L +EM   GFEP +STFVS+LSG+++  +     QG  +H CL K  +
Sbjct: 126 YSRVSSMDQALSLLKEMWVLGFEPTASTFVSILSGYSELDSFKFRLQGESIHCCLIKLGI 185

Query: 189 -HDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFS 248
            H +  + NSL+ MY  F  +D A  VF  + EK++ISWT M+GGY+K G   + F  F+
Sbjct: 186 VHTEVSLGNSLMAMYAQFCIMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAFALFN 245

Query: 249 QMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCG 308
           QM++ +V +D  VF+++IS CIQ+G L L SS+HSL+LK G    D I  LLI+MY+KCG
Sbjct: 246 QMQRQSVGIDFVVFLNLISGCIQVGELLLASSVHSLVLKCGCDEVDSIENLLIAMYAKCG 305

Query: 309 DLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAIS 368
           +L  A+ +FD++ EKS+ SWTS+I+GYA++G+P EAL LF    + ++RPNGA LA  +S
Sbjct: 306 NLTFAKKIFDMIIEKSMLSWTSIIAGYAHSGHPAEALDLFRRMVKTDIRPNGATLAVVLS 365

Query: 369 ACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAA 428
           ACADLGSLSM +EIE ++  +GL SD QV TSLIH+Y K GSI+KA +VF  +  +DL  
Sbjct: 366 ACADLGSLSMGQEIEEYVFLNGLESDQQVQTSLIHMYSKCGSIKKAREVFERVTDKDLTV 425

Query: 429 WSSMMNGYAVHGMGEKTMNLFHEM-QRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNM 488
           W+SM+N YA+HGMG + + LFH+M    GI PD  VY S+ LACSHSGLVEDGL++FK+M
Sbjct: 426 WTSMINSYAIHGMGNEAITLFHKMTTEEGIIPDAIVYTSVFLACSHSGLVEDGLKYFKSM 485

Query: 489 QLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVEL 548
           Q D+ I PT+ H TCL+D+L R G L+LAL+ IQ MP   Q+QAW   LSACR + +VEL
Sbjct: 486 QKDFRIAPTVEHCTCLIDLLGRVGQLDLALDAIQGMPLAVQAQAWGSLLSACRIHGNVEL 545

Query: 549 GEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQL 602
           GE+A   LL   P +  ++VLMANLYTS GKWKEA  +R+LID KGLVKE G SQ+
Sbjct: 546 GELATVKLLEIAPGSSGSYVLMANLYTSSGKWKEAHMMRNLIDGKGLVKECGWSQV 601

BLAST of Csa1G043310 vs. TAIR10
Match: AT4G18750.1 (AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 366.3 bits (939), Expect = 3.6e-101
Identity = 197/580 (33.97%), Postives = 316/580 (54.48%), Query Frame = 1

Query: 21  WNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDGTMLHAHLI 80
           WN+ +      G F+ S+  +  M  SG+  +++TF  + K+ ++L S+  G  LH  ++
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222

Query: 81  HVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFRVNEALK 140
             GF     V  SLV  Y K   + ++R+VFDE + R VISWNS+I  Y  +    + L 
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282

Query: 141 LFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVENSLVQM 200
           +F +ML  G E + +T VS+ +G AD    SL  GR +H    K     +    N+L+ M
Sbjct: 283 VFVQMLVSGIEIDLATIVSVFAGCADSRLISL--GRAVHSIGVKACFSREDRFCNTLLDM 342

Query: 201 YVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNNVVLDKFVF 260
           Y   G +DSA +VF  +S+++V+S+T M+ GY + G   +  + F +M +  +  D +  
Sbjct: 343 YSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTV 402

Query: 261 VDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLSE 320
             +++ C +   L  G  +H  + +  L ++  +   L+ MY+KCG +  A  VF  +  
Sbjct: 403 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 462

Query: 321 KSIYSWTSMISGYANAGYPREALSLFSMATQNN-VRPNGAMLATAISACADLGSLSMRRE 380
           K I SW ++I GY+   Y  EALSLF++  +     P+   +A  + ACA L +    RE
Sbjct: 463 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGRE 522

Query: 381 IEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGM 440
           I  +I ++G  SD  V+ SL+ +Y K G++  A  +F+ +  +DL +W+ M+ GY +HG 
Sbjct: 523 IHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGF 582

Query: 441 GEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGIVPTMVHYT 500
           G++ + LF++M+++GI+ D   + S+L ACSHSGLV++G   F  M+ +  I PT+ HY 
Sbjct: 583 GKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYA 642

Query: 501 CLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVELGEVANRCLLSSNPR 560
           C+VD+L+R G L  A   I+ MP    +  W   L  CR + DV+L E     +    P 
Sbjct: 643 CIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPE 702

Query: 561 NPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCS 600
           N   +VLMAN+Y    KW++  ++R  I  +GL K PGCS
Sbjct: 703 NTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 740


HSP 2 Score: 225.7 bits (574), Expect = 7.6e-59
Identity = 138/457 (30.20%), Postives = 235/457 (51.42%), Query Frame = 1

Query: 59  LLKACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRS 118
           +L+ CA+  S+ DG  +   +   GF  D  + + L  MY+   +L+ + +VFDE     
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK 159

Query: 119 VISWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLL 178
            + WN ++   ++S   + ++ LF++M+  G E +S TF  +   F+     S+  G  L
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR--SVHGGEQL 219

Query: 179 HGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAV 238
           HG + K    +   V NSLV  Y+   ++DSA  VF  ++E+ VISW  ++ GY+  G  
Sbjct: 220 HGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLA 279

Query: 239 AKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLL 298
            K    F QM  + + +D    V + + C     + LG ++HS+ +K     ED     L
Sbjct: 280 EKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTL 339

Query: 299 ISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNG 358
           + MYSKCGDL SA+AVF  +S++S+ S+TSMI+GYA  G   EA+ LF    +  + P+ 
Sbjct: 340 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDV 399

Query: 359 AMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNS 418
             +   ++ CA    L   + +  +I+++ L  D  VS +L+ +Y K GS+++AE VF+ 
Sbjct: 400 YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSE 459

Query: 419 MIHRDLAAWSSMMNGYAVHGMGEKTMNLFH-EMQRSGIKPDGSVYASILLACSHSGLVED 478
           M  +D+ +W++++ GY+ +    + ++LF+  ++     PD    A +L AC+     + 
Sbjct: 460 MRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDK 519

Query: 479 GLEHFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELA 515
           G E      +  G          LVD+ ++ G L LA
Sbjct: 520 GRE-IHGYIMRNGYFSDRHVANSLVDMYAKCGALLLA 553


HSP 3 Score: 166.0 bits (419), Expect = 7.1e-41
Identity = 111/425 (26.12%), Postives = 203/425 (47.76%), Query Frame = 1

Query: 102 SNLRASRQVFDETST--RSVISWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVS 161
           ++LR      D  +T  RSV   N+ +  +  S  +  A+KL    + G ++ +  T  S
Sbjct: 42  ASLRTVSDCVDSITTFDRSVTDANTQLRRFCESGNLENAVKLL--CVSGKWDIDPRTLCS 101

Query: 162 LLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISE 221
           +L   AD    SL  G+ +   +       D+ + + L  MY N G +  A  VF  +  
Sbjct: 102 VLQLCADSK--SLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKI 161

Query: 222 KTVISWTIMLGGYLKAGAVAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSL 281
           +  + W I++    K+G  +     F +M  + V +D + F  +  S   L ++  G  L
Sbjct: 162 EKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQL 221

Query: 282 HSLLLKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYP 341
           H  +LK+G    + +G  L++ Y K   + SAR VFD ++E+ + SW S+I+GY + G  
Sbjct: 222 HGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLA 281

Query: 342 REALSLFSMATQNNVRPNGAMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSL 401
            + LS+F     + +  + A + +  + CAD   +S+ R + +   +   + + +   +L
Sbjct: 282 EKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTL 341

Query: 402 IHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDG 461
           + +Y K G ++ A+ VF  M  R + +++SM+ GYA  G+  + + LF EM+  GI PD 
Sbjct: 342 LDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDV 401

Query: 462 SVYASILLACSHSGLVEDGL---EHFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALN 521
               ++L  C+   L+++G    E  K   L + I  +      L+D+ ++ G ++ A  
Sbjct: 402 YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS----NALMDMYAKCGSMQEAEL 458

BLAST of Csa1G043310 vs. TAIR10
Match: AT5G16860.1 (AT5G16860.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 365.5 bits (937), Expect = 6.1e-101
Identity = 220/630 (34.92%), Postives = 330/630 (52.38%), Query Frame = 1

Query: 18  LYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDGTMLHA 77
           +Y WN  IRS  + G   + L  +  M       +N+TFP + KAC  ++S+  G   HA
Sbjct: 92  VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151

Query: 78  HLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFRVNE 137
             +  GF S+VFV  +LV MYS+  +L  +R+VFDE S   V+SWNS+I +Y++  +   
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKV 211

Query: 138 ALKLFREMLGG-GFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVENS 197
           AL++F  M    G  P++ T V++L   A     SL  G+ LH      ++  +  V N 
Sbjct: 212 ALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSL--GKQLHCFAVTSEMIQNMFVGNC 271

Query: 198 LVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGA---VAKVFETFS------- 257
           LV MY   G +D A +VF  +S K V+SW  M+ GY + G      ++FE          
Sbjct: 272 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 331

Query: 258 -------------------------QMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHS 317
                                    QM  + +  ++   + ++S C  +G L  G  +H 
Sbjct: 332 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 391

Query: 318 L-------LLKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLS--EKSIYSWTSMISG 377
                   L K G   E+ +   LI MY+KC  + +ARA+FD LS  E+ + +WT MI G
Sbjct: 392 YAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGG 451

Query: 378 YANAGYPREALSLFSMATQNN--VRPNGAMLATAISACADLGSLSMRREIEAF-IQQDGL 437
           Y+  G   +AL L S   + +   RPN   ++ A+ ACA L +L + ++I A+ ++    
Sbjct: 452 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQN 511

Query: 438 ASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHE 497
           A    VS  LI +Y K GSI  A  VF++M+ ++   W+S+M GY +HG GE+ + +F E
Sbjct: 512 AVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDE 571

Query: 498 MQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGIVPTMVHYTCLVDILSRAG 557
           M+R G K DG     +L ACSHSG+++ G+E+F  M+  +G+ P   HY CLVD+L RAG
Sbjct: 572 MRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAG 631

Query: 558 HLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVELGEVANRCLLSSNPRNPVNHVLMAN 600
            L  AL  I+EMP +     W  FLS CR +  VELGE A   +      +  ++ L++N
Sbjct: 632 RLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSN 691


HSP 2 Score: 152.1 bits (383), Expect = 1.1e-36
Identity = 98/339 (28.91%), Postives = 165/339 (48.67%), Query Frame = 1

Query: 171 SLFQGRLLHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVF--YAISEKTVISWTIM 230
           ++ Q +L+H  L  F +     + + L+  Y++ G +  A S+   +  S+  V  W  +
Sbjct: 40  TISQVKLIHQKLLSFGILT-LNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSL 99

Query: 231 LGGYLKAGAVAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGL 290
           +  Y   G   K    F  M   +   D + F  +  +C ++ ++  G S H+L L TG 
Sbjct: 100 IRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGF 159

Query: 291 KYEDPIGCLLISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFS- 350
                +G  L++MYS+C  L  AR VFD +S   + SW S+I  YA  G P+ AL +FS 
Sbjct: 160 ISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSR 219

Query: 351 MATQNNVRPNGAMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFG 410
           M  +   RP+   L   +  CA LG+ S+ +++  F     +  +  V   L+ +Y K G
Sbjct: 220 MTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCG 279

Query: 411 SIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILL 470
            +++A  VF++M  +D+ +W++M+ GY+  G  E  + LF +MQ   IK D   +++ + 
Sbjct: 280 MMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAIS 339

Query: 471 ACSHSGLVEDGLEHFKNMQLDYGIVPTMVHYTCLVDILS 507
             +  GL  + L   + M L  GI P  V    L+ +LS
Sbjct: 340 GYAQRGLGYEALGVCRQM-LSSGIKPNEV---TLISVLS 373

BLAST of Csa1G043310 vs. TAIR10
Match: AT2G29760.1 (AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 362.8 bits (930), Expect = 4.0e-100
Identity = 197/578 (34.08%), Postives = 318/578 (55.02%), Query Frame = 1

Query: 59  LLKACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDM--YSKFSNLRASRQVFDETST 118
           L++ C +L  +      H H+I  G  SD +  + L  M   S F++L  +R+VFDE   
Sbjct: 36  LIERCVSLRQL---KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPK 95

Query: 119 RSVISWNSMIAAYSRSFRVNEALKLFREMLGGG-FEPNSSTFVSLLSGFADPTHGSLFQG 178
            +  +WN++I AY+       ++  F +M+      PN  TF  L+   A+ +  SL  G
Sbjct: 96  PNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVS--SLSLG 155

Query: 179 RLLHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKA 238
           + LHG   K  +  D  V NSL+  Y + G +DSAC VF  I EK V+SW  M+ G+++ 
Sbjct: 156 QSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 215

Query: 239 GAVAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIG 298
           G+  K  E F +M   +V       V ++S+C ++ NL  G  + S + +  +     + 
Sbjct: 216 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLA 275

Query: 299 CLLISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYA--------------------- 358
             ++ MY+KCG +  A+ +FD + EK   +WT+M+ GYA                     
Sbjct: 276 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIV 335

Query: 359 --NA--------GYPREALSLF-SMATQNNVRPNGAMLATAISACADLGSLSMRREIEAF 418
             NA        G P EAL +F  +  Q N++ N   L + +SACA +G+L + R I ++
Sbjct: 336 AWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSY 395

Query: 419 IQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGMGEKT 478
           I++ G+  +  V+++LIH+Y K G +EK+ +VFNS+  RD+  WS+M+ G A+HG G + 
Sbjct: 396 IKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEA 455

Query: 479 MNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGIVPTMVHYTCLVD 538
           +++F++MQ + +KP+G  + ++  ACSH+GLV++    F  M+ +YGIVP   HY C+VD
Sbjct: 456 VDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVD 515

Query: 539 ILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVELGEVANRCLLSSNPRNPVN 598
           +L R+G+LE A+  I+ MP    +  W   L AC+ + ++ L E+A   LL   PRN   
Sbjct: 516 VLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGA 575

Query: 599 HVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQL 602
           HVL++N+Y  +GKW+  +++R  +   GL KEPGCS +
Sbjct: 576 HVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSI 608


HSP 2 Score: 150.2 bits (378), Expect = 4.0e-36
Identity = 122/471 (25.90%), Postives = 207/471 (43.95%), Query Frame = 1

Query: 13  ITKKPLYLWNLTIRSSVNGGFFAQSLETY-SFMRHSGIHGNNFTFPLLLKACANLASIGD 72
           I K   + WN  IR+  +G     S+  +   +  S  + N +TFP L+KA A ++S+  
Sbjct: 90  IPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSL 149

Query: 73  GTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSR 132
           G  LH   +     SDVFV  SL+  Y    +L ++ +VF     + V+SWNSMI  + +
Sbjct: 150 GQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQ 209

Query: 133 SFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDT 192
               ++AL+LF++M     + +  T V +LS  A     +L  GR +   + + +++ + 
Sbjct: 210 KGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIR--NLEFGRQVCSYIEENRVNVNL 269

Query: 193 PVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQN 252
            + N+++ MY   G I+ A  +F A+ EK  ++WT ML GY  +       E  + M Q 
Sbjct: 270 TLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK 329

Query: 253 NVVLDKFVFVDIISSCIQLG--NLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKC---- 312
           ++V     +  +IS+  Q G  N  L    H L L+  +K        L+S  S C    
Sbjct: 330 DIV----AWNALISAYEQNGKPNEAL-IVFHELQLQKNMKLNQ---ITLVSTLSACAQVG 389

Query: 313 ----------------------------------GDLLSARAVFDLLSEKSIYSWTSMIS 372
                                             GDL  +R VF+ + ++ ++ W++MI 
Sbjct: 390 ALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIG 449

Query: 373 GYANAGYPREALSLFSMATQNNVRPNGAMLATAISACADLGSLSMRREIEAFIQQ----D 432
           G A  G   EA+ +F    + NV+PNG        AC+  G +    E E+   Q     
Sbjct: 450 GLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVD---EAESLFHQMESNY 509

Query: 433 GLASDSQVSTSLIHLYCKFGSIEKAEKVFNSM-IHRDLAAWSSMMNGYAVH 438
           G+  + +    ++ +  + G +EKA K   +M I    + W +++    +H
Sbjct: 510 GIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIH 547


HSP 3 Score: 104.8 bits (260), Expect = 1.9e-22
Identity = 101/421 (23.99%), Postives = 182/421 (43.23%), Query Frame = 1

Query: 85  ESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFRVNEALKLFRE 144
           E D    T+++D Y+   +  A+R+V +    + +++WN++I+AY ++ + NEAL +F E
Sbjct: 295 EKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHE 354

Query: 145 M-LGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTPVENSLVQMYVN 204
           + L    + N  T VS LS  A    G+L  GR +H  + K  +  +  V ++L+ MY  
Sbjct: 355 LQLQKNMKLNQITLVSTLSACAQV--GALELGRWIHSYIKKHGIRMNFHVTSALIHMYSK 414

Query: 205 FGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNNVVLDKFVFVDI 264
            G ++ +  VF ++ ++ V  W+ M+GG    G   +  + F +M++ NV  +   F ++
Sbjct: 415 CGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNV 474

Query: 265 ISSCIQLGNLFLGSSL-HSLLLKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLSEKS 324
             +C   G +    SL H +    G+  E+     ++ +  + G L  A      +    
Sbjct: 475 FCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKA---VKFIEAMP 534

Query: 325 IYSWTSMISGYANAGYPREALSLFSMA----TQNNVRPNGAMLATAISACADLGSLSMRR 384
           I   TS+      A      L+L  MA     +   R +GA +  + +  A LG      
Sbjct: 535 IPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLS-NIYAKLGKWENVS 594

Query: 385 EIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHG 444
           E+   ++  GL  +   S           SIE      + MIH         ++G   H 
Sbjct: 595 ELRKHMRVTGLKKEPGCS-----------SIE-----IDGMIH-------EFLSGDNAHP 654

Query: 445 MGEKTMNLFHE----MQRSGIKPDGSVYASILLACSHSGLVEDGLE-HFKNMQLDYGIVP 495
           M EK     HE    ++ +G +P+    + +L       + E  L  H + + + YG++ 
Sbjct: 655 MSEKVYGKLHEVMEKLKSNGYEPE---ISQVLQIIEEEEMKEQSLNLHSEKLAICYGLIS 683

BLAST of Csa1G043310 vs. TAIR10
Match: AT3G12770.1 (AT3G12770.1 mitochondrial editing factor 22)

HSP 1 Score: 359.8 bits (922), Expect = 3.4e-99
Identity = 193/556 (34.71%), Postives = 314/556 (56.47%), Query Frame = 1

Query: 46  HSGIHGNNFTFPLLLKACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLR 105
           +SGIH ++F +  L+ +  + A +     +HA L+ +G +   F+ T L+   S F ++ 
Sbjct: 15  NSGIHSDSF-YASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDIT 74

Query: 106 ASRQVFDETSTRSVISWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFA 165
            +RQVFD+     +  WN++I  YSR+    +AL ++  M      P+S TF  LL   +
Sbjct: 75  FARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS 134

Query: 166 DPTHGSLFQGRLLHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAIS--EKTVI 225
             +H  L  GR +H  + +     D  V+N L+ +Y    ++ SA +VF  +   E+T++
Sbjct: 135 GLSH--LQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIV 194

Query: 226 SWTIMLGGYLKAGAVAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLL 285
           SWT ++  Y + G   +  E FSQMR+ +V  D    V ++++   L +L  G S+H+ +
Sbjct: 195 SWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASV 254

Query: 286 LKTGLKYEDPIGCLLISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREAL 345
           +K GL+ E  +   L +MY+KCG + +A+ +FD +   ++  W +MISGYA  GY REA+
Sbjct: 255 VKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAI 314

Query: 346 SLFSMATQNNVRPNGAMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLY 405
            +F      +VRP+   + +AISACA +GSL   R +  ++ +     D  +S++LI ++
Sbjct: 315 DMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMF 374

Query: 406 CKFGSIEKAEKVFNSMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYA 465
            K GS+E A  VF+  + RD+  WS+M+ GY +HG   + ++L+  M+R G+ P+   + 
Sbjct: 375 AKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFL 434

Query: 466 SILLACSHSGLVEDGLEHFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPT 525
            +L+AC+HSG+V +G   F N   D+ I P   HY C++D+L RAGHL+ A   I+ MP 
Sbjct: 435 GLLMACNHSGMVREGWWFF-NRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPV 494

Query: 526 QFQSQAWAPFLSACRTYCDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKV 585
           Q     W   LSAC+ +  VELGE A + L S +P N  ++V ++NLY +   W   A+V
Sbjct: 495 QPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEV 554

Query: 586 RSLIDDKGLVKEPGCS 600
           R  + +KGL K+ GCS
Sbjct: 555 RVRMKEKGLNKDVGCS 563


HSP 2 Score: 109.0 bits (271), Expect = 1.0e-23
Identity = 69/320 (21.56%), Postives = 145/320 (45.31%), Query Frame = 1

Query: 13  ITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDG 72
           + ++ +  W   + +    G   ++LE +S MR   +  +      +L A   L  +  G
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQG 241

Query: 73  TMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRS 132
             +HA ++ +G E +  +  SL  MY+K   +  ++ +FD+  + ++I WN+MI+ Y+++
Sbjct: 242 RSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN 301

Query: 133 FRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTP 192
               EA+ +F EM+     P++ +  S +S  A    GSL Q R ++  + +    DD  
Sbjct: 302 GYAREAIDMFHEMINKDVRPDTISITSAISACAQV--GSLEQARSMYEYVGRSDYRDDVF 361

Query: 193 VENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNN 252
           + ++L+ M+   G ++ A  VF    ++ V+ W+ M+ GY   G   +    +  M +  
Sbjct: 362 ISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGG 421

Query: 253 VVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSAR 312
           V  +   F+ ++ +C   G +  G    + +    +  +      +I +  + G L  A 
Sbjct: 422 VHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAY 481

Query: 313 AVFDLLS-EKSIYSWTSMIS 332
            V   +  +  +  W +++S
Sbjct: 482 EVIKCMPVQPGVTVWGALLS 499

BLAST of Csa1G043310 vs. TAIR10
Match: AT2G03380.1 (AT2G03380.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 359.0 bits (920), Expect = 5.7e-99
Identity = 203/591 (34.35%), Postives = 322/591 (54.48%), Query Frame = 1

Query: 13  ITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDG 72
           I +   YLW + +R         + ++ Y  +   G   ++  F   LKAC  L  + +G
Sbjct: 102 IPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNG 161

Query: 73  TMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRS 132
             +H  L+ V    +V V T L+DMY+K   ++++ +VF++ + R+V+ W SMIA Y ++
Sbjct: 162 KKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKN 221

Query: 133 FRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHDDTP 192
               E L LF  M       N  T+ +L+   A     +L QG+  HGCL K  +   + 
Sbjct: 222 DLCEEGLVLFNRMRENNVLGNEYTYGTLI--MACTKLSALHQGKWFHGCLVKSGIELSSC 281

Query: 193 VENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNN 252
           +  SL+ MYV  G I +A  VF   S   ++ WT M+ GY   G+V +    F +M+   
Sbjct: 282 LVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE 341

Query: 253 VVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSAR 312
           +  +      ++S C  + NL LG S+H L +K G+ ++  +   L+ MY+KC     A+
Sbjct: 342 IKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAK 401

Query: 313 AVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAISACADLG 372
            VF++ SEK I +W S+ISG++  G   EAL LF      +V PNG  +A+  SACA LG
Sbjct: 402 YVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLG 461

Query: 373 SLSMRREIEAFIQQDG-LASDS-QVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSM 432
           SL++   + A+  + G LAS S  V T+L+  Y K G  + A  +F+++  ++   WS+M
Sbjct: 462 SLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAM 521

Query: 433 MNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYG 492
           + GY   G    ++ LF EM +   KP+ S + SIL AC H+G+V +G ++F +M  DY 
Sbjct: 522 IGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYN 581

Query: 493 IVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVELGEVAN 552
             P+  HYTC+VD+L+RAG LE AL+ I++MP Q   + +  FL  C  +   +LGE+  
Sbjct: 582 FTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVI 641

Query: 553 RCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQL 602
           + +L  +P +   +VL++NLY S G+W +A +VR+L+  +GL K  G S +
Sbjct: 642 KKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTM 688


HSP 2 Score: 221.1 bits (562), Expect = 1.9e-57
Identity = 141/471 (29.94%), Postives = 233/471 (49.47%), Query Frame = 1

Query: 58  LLLKACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTR 117
           LLL  C N+ S+      H  L   G   D+ + T LV +Y  F   + +R VFD+    
Sbjct: 49  LLLSKCTNIDSLRQS---HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEP 108

Query: 118 SVISWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRL 177
               W  M+  Y  +    E +KL+  ++  GF  +   F   L    +     L  G+ 
Sbjct: 109 DFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQ--DLDNGKK 168

Query: 178 LHGCLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGA 237
           +H  L K    D+  V   L+ MY   G+I SA  VF  I+ + V+ WT M+ GY+K   
Sbjct: 169 IHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDL 228

Query: 238 VAKVFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCL 297
             +    F++MR+NNV+ +++ +  +I +C +L  L  G   H  L+K+G++    +   
Sbjct: 229 CEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTS 288

Query: 298 LISMYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPN 357
           L+ MY KCGD+ +AR VF+  S   +  WT+MI GY + G   EALSLF       ++PN
Sbjct: 289 LLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPN 348

Query: 358 GAMLATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFN 417
              +A+ +S C  + +L + R +     + G+  D+ V+ +L+H+Y K      A+ VF 
Sbjct: 349 CVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFE 408

Query: 418 SMIHRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVED 477
               +D+ AW+S+++G++ +G   + + LFH M    + P+G   AS+  AC+  G +  
Sbjct: 409 MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAV 468

Query: 478 GLE-HFKNMQLDYGIVPTMVHY-TCLVDILSRAG---HLELALNTIQEMPT 524
           G   H  +++L + +  + VH  T L+D  ++ G      L  +TI+E  T
Sbjct: 469 GSSLHAYSVKLGF-LASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNT 511

BLAST of Csa1G043310 vs. NCBI nr
Match: gi|449439735|ref|XP_004137641.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g12770 [Cucumis sativus])

HSP 1 Score: 1200.3 bits (3104), Expect = 0.0e+00
Identity = 601/601 (100.00%), Postives = 601/601 (100.00%), Query Frame = 1

Query: 1   MQIHRFSSSSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLL 60
           MQIHRFSSSSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLL
Sbjct: 1   MQIHRFSSSSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLL 60

Query: 61  KACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVI 120
           KACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVI
Sbjct: 61  KACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVI 120

Query: 121 SWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHG 180
           SWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHG
Sbjct: 121 SWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHG 180

Query: 181 CLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAK 240
           CLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAK
Sbjct: 181 CLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAK 240

Query: 241 VFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLIS 300
           VFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLIS
Sbjct: 241 VFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLIS 300

Query: 301 MYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAM 360
           MYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAM
Sbjct: 301 MYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAM 360

Query: 361 LATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMI 420
           LATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMI
Sbjct: 361 LATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMI 420

Query: 421 HRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLE 480
           HRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLE
Sbjct: 421 HRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLE 480

Query: 481 HFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTY 540
           HFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTY
Sbjct: 481 HFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTY 540

Query: 541 CDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQ 600
           CDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQ
Sbjct: 541 CDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQ 600

Query: 601 L 602
           L
Sbjct: 601 L 601

BLAST of Csa1G043310 vs. NCBI nr
Match: gi|659068757|ref|XP_008446053.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-like [Cucumis melo])

HSP 1 Score: 1155.6 bits (2988), Expect = 0.0e+00
Identity = 578/601 (96.17%), Postives = 588/601 (97.84%), Query Frame = 1

Query: 1   MQIHRFSSSSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLL 60
           MQIHRFSSSSTLITKKPLYLWNLTIRSSVNGGFFAQ+LETYSFMR SGIHGNNFTFPLLL
Sbjct: 1   MQIHRFSSSSTLITKKPLYLWNLTIRSSVNGGFFAQTLETYSFMRQSGIHGNNFTFPLLL 60

Query: 61  KACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVI 120
           KACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSK S+LRASRQVFDETSTRSVI
Sbjct: 61  KACANLASIGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKISDLRASRQVFDETSTRSVI 120

Query: 121 SWNSMIAAYSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHG 180
            WNSMIAAYSR FRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHG
Sbjct: 121 FWNSMIAAYSRGFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHG 180

Query: 181 CLTKFQLHDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAK 240
            +TKFQ HDDTPV+NSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAK
Sbjct: 181 FMTKFQFHDDTPVQNSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAK 240

Query: 241 VFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLIS 300
           VFETFSQMRQNNVVLDKFVFVDIISSCIQLGNL LGSSLHSLLLKT LKY+DPIGCLLIS
Sbjct: 241 VFETFSQMRQNNVVLDKFVFVDIISSCIQLGNLSLGSSLHSLLLKTALKYQDPIGCLLIS 300

Query: 301 MYSKCGDLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAM 360
           MYSKCGDLLSARAVFDLLSEKSIYSWTSMIS YANAGYPREALSLF+MATQNNVRPNGAM
Sbjct: 301 MYSKCGDLLSARAVFDLLSEKSIYSWTSMISEYANAGYPREALSLFTMATQNNVRPNGAM 360

Query: 361 LATAISACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMI 420
           LATAISACADLGSLSM REIEAFIQQDGLASD QVSTSLIHLYCKFGS EKAEKVF+SMI
Sbjct: 361 LATAISACADLGSLSMLREIEAFIQQDGLASDYQVSTSLIHLYCKFGSFEKAEKVFSSMI 420

Query: 421 HRDLAAWSSMMNGYAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLE 480
           HRDLAAWSSMMNGYA+HGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGL+
Sbjct: 421 HRDLAAWSSMMNGYAMHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLQ 480

Query: 481 HFKNMQLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTY 540
           HFKNMQLDYGIVP MVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTY
Sbjct: 481 HFKNMQLDYGIVPNMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTY 540

Query: 541 CDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQ 600
           CDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVK+PGCSQ
Sbjct: 541 CDVELGEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKQPGCSQ 600

Query: 601 L 602
           L
Sbjct: 601 L 601

BLAST of Csa1G043310 vs. NCBI nr
Match: gi|1009133338|ref|XP_015883847.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Ziziphus jujuba])

HSP 1 Score: 652.5 bits (1682), Expect = 7.1e-184
Identity = 317/588 (53.91%), Postives = 426/588 (72.45%), Query Frame = 1

Query: 15  KKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDGTM 74
           K+PL+LWNL IR S+N G F+ +L+ Y+ M H+G+HGN+FTFPL+ KAC+NL SI     
Sbjct: 6   KRPLFLWNLMIRDSINHGLFSHTLQLYASMFHTGLHGNSFTFPLVFKACSNLTSIDFAIQ 65

Query: 75  LHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFR 134
           LH+H+   GF +D+FVQT+L+DMYS  S L +SR+VFDE   RS++SWNS+I+AYSR+FR
Sbjct: 66  LHSHVFRNGFHADLFVQTALIDMYSSCSRLGSSRKVFDEMPMRSLVSWNSIISAYSRAFR 125

Query: 135 VNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSLFQGRLLHGCLTKFQLHD-DTPV 194
           VNEA  L +E+   G +P+SSTFVS+LSG   P + SLF    +HGC  K  L + + P+
Sbjct: 126 VNEAFLLLKEVWVLGLQPSSSTFVSILSGCCHPDNHSLFHCLSIHGCAIKLGLTNCEIPL 185

Query: 195 ENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNNV 254
            NSL+  Y++FGQ+D A  +F  I EK++ISWT ++GGY + G V + F  F+QMRQ ++
Sbjct: 186 ANSLLNAYIHFGQMDRARFIFNNIEEKSLISWTTIIGGYFRVGNVDEAFSLFNQMRQTSL 245

Query: 255 VLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSARA 314
            LD  +FV ++S C Q GN+ L SS+HSL+LK G   E+PI  LL++MY+ CGDL+SAR 
Sbjct: 246 SLDSVLFVILVSGCAQEGNIILASSVHSLVLKAGSDDEEPINHLLVTMYANCGDLVSARK 305

Query: 315 VFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAISACADLGS 374
            F + +++SI  WTSMI GY + GYP EA +LF        +P GA LA  +SA ADL S
Sbjct: 306 TFHMANDRSISLWTSMIGGYTHLGYPEEAFNLFRKLLSTATKPTGATLAIILSAYADLQS 365

Query: 375 LSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMNG 434
           LSM +EIE +I  +GL SD++V TSLIH++C+ G+I+KA ++F  + ++DL  WSSM+NG
Sbjct: 366 LSMGKEIEEYILMNGLGSDTRVQTSLIHMFCRCGAIKKARELFERVTNKDLVVWSSMING 425

Query: 435 YAVHGMGEKTMNLFHEMQRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGIVP 494
           YA HGMGE+ ++LFH MQ SGIKPD  VY SIL ACSHSGLV DG+++F +MQ D+GI P
Sbjct: 426 YATHGMGEEALSLFHNMQSSGIKPDSVVYKSILTACSHSGLVADGMKYFHSMQKDFGIQP 485

Query: 495 TMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVELGEVANRCL 554
           T  HY CLVD+L RAG L LA+  IQEMP + Q+ AW P LSACRTYC++ELGE+A + L
Sbjct: 486 TSEHYACLVDLLGRAGQLNLAVRIIQEMPVEEQALAWGPLLSACRTYCNIELGELAAKKL 545

Query: 555 LSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQL 602
           L  NP +  N VL+ANLYTS+GKW++AA  R LI ++ L+KE G S +
Sbjct: 546 LDLNPESASNCVLVANLYTSVGKWEKAATTRRLIKEEQLIKERGWSHI 593

BLAST of Csa1G043310 vs. NCBI nr
Match: gi|950927789|ref|XP_014495233.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Vigna radiata var. radiata])

HSP 1 Score: 651.7 bits (1680), Expect = 1.2e-183
Identity = 329/596 (55.20%), Postives = 435/596 (72.99%), Query Frame = 1

Query: 9   SSTLITKKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLAS 68
           SS +  ++PLYLWNL IR S N GFF Q+L  YS M HSG+HGNN T+PLLLKACANLAS
Sbjct: 6   SSLVSFRRPLYLWNLMIRDSTNNGFFIQTLNIYSSMAHSGVHGNNLTYPLLLKACANLAS 65

Query: 69  IGDGTMLHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAA 128
           I  GT+LH+HL+ +GF++D FVQT+LVDMYSK S++ ++R VFDE   RSV+SWN+M++A
Sbjct: 66  IQHGTVLHSHLLKLGFQADAFVQTALVDMYSKSSHVESARLVFDEMPHRSVVSWNTMVSA 125

Query: 129 YSRSFRVNEALKLFREMLGGGFEPNSSTFVSLLSGFAD-PTHGSLFQGRLLHGCLTKFQL 188
           YSR   +++AL L +EM   GF+P +STFVS+LSG+++  T     QG  +HGCL K  +
Sbjct: 126 YSRVSSMDQALSLLKEMWVLGFKPTASTFVSILSGYSNVDTFKFRLQGVSIHGCLIKLGI 185

Query: 189 -HDDTPVENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFS 248
            + +  + NSL+ MY  F ++D A  VF  + EK++ISWT M+GGY+K G   + F  F 
Sbjct: 186 VNTEVSLANSLMAMYAQFCRMDEARKVFDLMDEKSIISWTTMIGGYVKIGHATEAFGLFK 245

Query: 249 QMRQNNVVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCG 308
           QM++ +V +D  VF+++IS CIQ+G L L SS+HSL+LK G      +  LLI+MYSKCG
Sbjct: 246 QMQRQSVGIDFVVFLNLISGCIQVGELLLASSVHSLVLKCGCDEAGSVENLLITMYSKCG 305

Query: 309 DLLSARAVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAIS 368
           +L  AR +FDL+ EKS+ SWTSMI+GYA++G P EAL LF    + ++RPNGA LAT +S
Sbjct: 306 NLTFARRIFDLIIEKSMLSWTSMIAGYAHSGLPVEALDLFRRMLKTDIRPNGATLATVLS 365

Query: 369 ACADLGSLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAA 428
           ACADLGSLSM +EIE ++  +G  SD QV TSLIH+Y K G I+KA +VF  +  +DL  
Sbjct: 366 ACADLGSLSMGQEIEEYVFLNGWESDQQVQTSLIHMYSKCGCIKKAREVFEKVTDKDLTV 425

Query: 429 WSSMMNGYAVHGMGEKTMNLFHEM-QRSGIKPDGSVYASILLACSHSGLVEDGLEHFKNM 488
           W+SM+N YA+HGMG + ++LFH+M    GI PD  VY S+LLACSHSGLVEDGL++FK+M
Sbjct: 426 WTSMINSYAIHGMGNEAISLFHKMTTEEGIIPDAIVYTSVLLACSHSGLVEDGLKYFKSM 485

Query: 489 QLDYGIVPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVEL 548
           Q D+ I PT+ H TCL+D+L R G L+LAL+ IQ MP   Q+QAW   LSACR + +VEL
Sbjct: 486 QKDFRIAPTVEHCTCLIDLLGRVGQLDLALDAIQGMPLAVQAQAWGSLLSACRIHGNVEL 545

Query: 549 GEVANRCLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQL 602
           GE+A   LL ++P    ++VLM+NLYTS GKWKEA  +R+LID KGLVKE G SQ+
Sbjct: 546 GELATFKLLETSPGRSGSYVLMSNLYTSSGKWKEAHMMRNLIDGKGLVKECGWSQV 601

BLAST of Csa1G043310 vs. NCBI nr
Match: gi|356561794|ref|XP_003549163.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g19191, mitochondrial-like [Glycine max])

HSP 1 Score: 651.4 bits (1679), Expect = 1.6e-183
Identity = 325/590 (55.08%), Postives = 432/590 (73.22%), Query Frame = 1

Query: 15  KKPLYLWNLTIRSSVNGGFFAQSLETYSFMRHSGIHGNNFTFPLLLKACANLASIGDGTM 74
           ++ LY WNL IR S N GFF Q+L  YS M HSG+HGNN T+PLLLKACANL SI  GTM
Sbjct: 8   RRSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTM 67

Query: 75  LHAHLIHVGFESDVFVQTSLVDMYSKFSNLRASRQVFDETSTRSVISWNSMIAAYSRSFR 134
           LH H++ +GF++D FVQT+LVDMYSK S++ ++RQVFDE   RSV+SWN+M++AYSR   
Sbjct: 68  LHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSS 127

Query: 135 VNEALKLFREMLGGGFEPNSSTFVSLLSGFADPTHGSL-FQGRLLHGCLTKFQL-HDDTP 194
           +++AL L +EM   GFEP +STFVS+LSG+++         G+ +H CL K  + + +  
Sbjct: 128 MDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLLGKSIHCCLIKLGIVYLEVS 187

Query: 195 VENSLVQMYVNFGQIDSACSVFYAISEKTVISWTIMLGGYLKAGAVAKVFETFSQMRQNN 254
           + NSL+ MYV F  +D A  VF  + EK++ISWT M+GGY+K G   + +  F QM+  +
Sbjct: 188 LANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQHQS 247

Query: 255 VVLDKFVFVDIISSCIQLGNLFLGSSLHSLLLKTGLKYEDPIGCLLISMYSKCGDLLSAR 314
           V +D  VF+++IS CIQ+ +L L SS+HSL+LK G   +DP+  LLI+MY+KCG+L SAR
Sbjct: 248 VGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTSAR 307

Query: 315 AVFDLLSEKSIYSWTSMISGYANAGYPREALSLFSMATQNNVRPNGAMLATAISACADLG 374
            +FDL+ EKS+ SWTSMI+GY + G+P EAL LF    + ++RPNGA LAT +SACADLG
Sbjct: 308 RIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACADLG 367

Query: 375 SLSMRREIEAFIQQDGLASDSQVSTSLIHLYCKFGSIEKAEKVFNSMIHRDLAAWSSMMN 434
           SLS+ +EIE +I  +GL SD QV TSLIH+Y K GSI KA +VF  +  +DL  W+SM+N
Sbjct: 368 SLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKAREVFERVTDKDLTVWTSMIN 427

Query: 435 GYAVHGMGEKTMNLFHEMQRS-GIKPDGSVYASILLACSHSGLVEDGLEHFKNMQLDYGI 494
            YA+HGMG + ++LFH+M  + GI PD  VY S+ LACSHSGLVE+GL++FK+MQ D+GI
Sbjct: 428 SYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSHSGLVEEGLKYFKSMQKDFGI 487

Query: 495 VPTMVHYTCLVDILSRAGHLELALNTIQEMPTQFQSQAWAPFLSACRTYCDVELGEVANR 554
            PT+ H TCL+D+L R G L+LALN IQ MP   Q+Q W P LSACR + +VELGE+A  
Sbjct: 488 TPTVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWGPLLSACRIHGNVELGELATV 547

Query: 555 CLLSSNPRNPVNHVLMANLYTSMGKWKEAAKVRSLIDDKGLVKEPGCSQL 602
            LL S+P +  ++VLMANLYTS+GKWKEA  +R+ +D KGLVKE G SQ+
Sbjct: 548 RLLDSSPGSSGSYVLMANLYTSLGKWKEAHMMRNSMDGKGLVKESGWSQV 597

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP320_ARATH6.4e-10033.97Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... [more]
PP390_ARATH1.1e-9934.92Pentatricopeptide repeat-containing protein At5g16860 OS=Arabidopsis thaliana GN... [more]
PP175_ARATH7.0e-9934.08Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
PP224_ARATH6.0e-9834.71Pentatricopeptide repeat-containing protein At3g12770 OS=Arabidopsis thaliana GN... [more]
PP146_ARATH1.0e-9734.35Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0LT91_CUCSA0.0e+00100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043310 PE=4 SV=1[more]
A0A0D2RDY6_GOSRA1.4e-18354.55Uncharacterized protein OS=Gossypium raimondii GN=B456_005G014400 PE=4 SV=1[more]
A0A0L9VHU5_PHAAN3.2e-18354.94Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g052300 PE=4 SV=1[more]
A0A0S3TBU1_PHAAN3.2e-18354.94Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.11G208900 PE=... [more]
V7C2U8_PHAVU7.1e-18354.87Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G135700g PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G18750.13.6e-10133.97 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G16860.16.1e-10134.92 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G29760.14.0e-10034.08 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G12770.13.4e-9934.71 mitochondrial editing factor 22[more]
AT2G03380.15.7e-9934.35 Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449439735|ref|XP_004137641.1|0.0e+00100.00PREDICTED: pentatricopeptide repeat-containing protein At3g12770 [Cucumis sativu... [more]
gi|659068757|ref|XP_008446053.1|0.0e+0096.17PREDICTED: pentatricopeptide repeat-containing protein At2g29760, chloroplastic-... [more]
gi|1009133338|ref|XP_015883847.1|7.1e-18453.91PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Ziziphus ... [more]
gi|950927789|ref|XP_014495233.1|1.2e-18355.20PREDICTED: pentatricopeptide repeat-containing protein At3g12770-like [Vigna rad... [more]
gi|356561794|ref|XP_003549163.1|1.6e-18355.08PREDICTED: pentatricopeptide repeat-containing protein At4g19191, mitochondrial-... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009451 RNA modification
cellular_component GO:0005575 cellular_component
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0008270 zinc ion binding
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU150290cucumber EST collection version 3.0transcribed_cluster
CU159082cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G043310.1Csa1G043310.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU150290CU150290transcribed_cluster
CU159082CU159082transcribed_cluster


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 397..422
score: 1.2E-5coord: 298..321
score: 0.25coord: 223..253
score: 3.7E-4coord: 496..522
score: 0.042coord: 324..348
score: 1.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 118..165
score: 1.4E-12coord: 423..469
score: 5.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 397..424
score: 1.7E-5coord: 120..153
score: 1.9E-8coord: 324..357
score: 1.5E-5coord: 223..256
score: 1.4E-4coord: 426..458
score: 2.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 17..51
score: 6.325coord: 560..594
score: 6.884coord: 221..255
score: 9.646coord: 423..457
score: 12.321coord: 392..422
score: 9.087coord: 190..220
score: 6.445coord: 458..493
score: 7.914coord: 494..524
score: 7.41coord: 291..321
score: 5.382coord: 52..86
score: 6.007coord: 87..117
score: 6.106coord: 118..152
score: 12.726coord: 322..356
score: 10.983coord: 256..290
score: 5
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 297..485
score: 1.1E-6coord: 554..582
score: 1.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 18..256
score: 7.7E-274coord: 292..601
score: 7.7E
NoneNo IPR availablePANTHERPTHR24015:SF498SUBFAMILY NOT NAMEDcoord: 18..256
score: 7.7E-274coord: 292..601
score: 7.7E