CU148730 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU148730
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 13645395 .. 13645567 (+)
Sequence length172
The following sequences are available for this feature:

transcribed_cluster sequence

GGGTATACAGGGGATAAGAAATTGTCGTCTCGGAAAACTAAAAGAGCAGACTCTTCAGCCACAAAATCCAGAAAACGGAAGGGCAGGTCAGATAACACGGCATCACATTCAAAAGACAGGGAGGGATCAACCAAGGCCTCCTGCCAAGTCACCTAAAGTTATGAAATGCAAA
Library categoryESTs
gynoecious flower library1
BLAST of CU148730 vs. TrEMBL
Match: A0A0A0L6Y1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G199010 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 2.3e-14
Identity = 45/57 (78.95%), Postives = 47/57 (82.46%), Query Frame = 1

Query: 1   GYTGDKKLSSRKTKRADSSATKSRKRKGRSDNTASHSKDREGSTKASCQVT*SYEMQ 60
           G TGDKKLSSRKTKRADSSATKSRKRKGRSDNTASHSKDREGS +   +     EMQ
Sbjct: 217 GDTGDKKLSSRKTKRADSSATKSRKRKGRSDNTASHSKDREGSPRPPAKSPKVNEMQ 273

Query: 61  120
           
Sbjct: 277 273

Query: 121 172
           
Sbjct: 337 273

BLAST of CU148730 vs. NCBI nr
Match: gi|778679986|ref|XP_011651230.1| (PREDICTED: homeobox protein HOX1A [Cucumis sativus])

HSP 1 Score: 73.6 bits (179), Expect = 1.3e-10
Identity = 45/57 (78.95%), Postives = 47/57 (82.46%), Query Frame = 1

Query: 1    GYTGDKKLSSRKTKRADSSATKSRKRKGRSDNTASHSKDREGSTKASCQVT*SYEMQ 60
            G TGDKKLSSRKTKRADSSATKSRKRKGRSDNTASHSKDREGS +   +     EMQ
Sbjct: 970  GDTGDKKLSSRKTKRADSSATKSRKRKGRSDNTASHSKDREGSPRPPAKSPKVNEMQ 1026

Query: 61   120
            
Sbjct: 1030 1026

Query: 121  172
            
Sbjct: 1090 1026

BLAST of CU148730 vs. NCBI nr
Match: gi|700202355|gb|KGN57488.1| (hypothetical protein Csa_3G199010 [Cucumis sativus])

HSP 1 Score: 73.6 bits (179), Expect = 1.3e-10
Identity = 45/57 (78.95%), Postives = 47/57 (82.46%), Query Frame = 1

Query: 1   GYTGDKKLSSRKTKRADSSATKSRKRKGRSDNTASHSKDREGSTKASCQVT*SYEMQ 60
           G TGDKKLSSRKTKRADSSATKSRKRKGRSDNTASHSKDREGS +   +     EMQ
Sbjct: 217 GDTGDKKLSSRKTKRADSSATKSRKRKGRSDNTASHSKDREGSPRPPAKSPKVNEMQ 273

Query: 61  120
           
Sbjct: 277 273

Query: 121 172
           
Sbjct: 337 273

BLAST of CU148730 vs. NCBI nr
Match: gi|659112354|ref|XP_008456180.1| (PREDICTED: homeobox protein HAT3.1 isoform X2 [Cucumis melo])

HSP 1 Score: 64.7 bits (156), Expect = 6.0e-08
Identity = 37/45 (82.22%), Postives = 42/45 (93.33%), Query Frame = 1

Query: 1   GYTGDKKLSSRKTKRADSSATKSRKRKGRSDNTASHSKDREGSTK 60
           G TGDKKL++RKTKR +SSATKSRKRKGRSDNTAS+SKDREGS +
Sbjct: 935 GDTGDKKLTTRKTKRGESSATKSRKRKGRSDNTASNSKDREGSPR 979

Query: 61  120
           
Sbjct: 995 979

Query: 121 136
           
Sbjct: 1055 979

BLAST of CU148730 vs. NCBI nr
Match: gi|659112348|ref|XP_008456177.1| (PREDICTED: pathogenesis-related homeodomain protein isoform X1 [Cucumis melo])

HSP 1 Score: 64.7 bits (156), Expect = 6.0e-08
Identity = 37/45 (82.22%), Postives = 42/45 (93.33%), Query Frame = 1

Query: 1    GYTGDKKLSSRKTKRADSSATKSRKRKGRSDNTASHSKDREGSTK 60
            G TGDKKL++RKTKR +SSATKSRKRKGRSDNTAS+SKDREGS +
Sbjct: 993  GDTGDKKLTTRKTKRGESSATKSRKRKGRSDNTASNSKDREGSPR 1037

Query: 61   120
            
Sbjct: 1053 1037

Query: 121  136
            
Sbjct: 1113 1037

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L6Y1_CUCSA2.3e-1478.95Uncharacterized protein OS=Cucumis sativus GN=Csa_3G199010 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778679986|ref|XP_011651230.1|1.3e-1078.95PREDICTED: homeobox protein HOX1A [Cucumis sativus][more]
gi|700202355|gb|KGN57488.1|1.3e-1078.95hypothetical protein Csa_3G199010 [Cucumis sativus][more]
gi|659112354|ref|XP_008456180.1|6.0e-0882.22PREDICTED: homeobox protein HAT3.1 isoform X2 [Cucumis melo][more]
gi|659112348|ref|XP_008456177.1|6.0e-0882.22PREDICTED: pathogenesis-related homeodomain protein isoform X1 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa3G199010Csa3G199010gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0160157G0160157EST