Csa3G199010 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G199010
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionPathogenesis-related homeodomain protein; contains IPR009057 (Homeodomain-like)
LocationChr3 : 13643435 .. 13646136 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGTATGTTGTGCTTTAAATGCTTGATAGGAGAAAGTCTAGATATTGAACAGGGTTCTTGCTTAGTTTTGGACTAAATGAGTTAACATTTCTATTCATTTAAATTTTTTTCCTATTACATTATTGAAGGAGACATACGGGAACGTTCCTACTGACTCAAGCGATGACACCTACGGGAGTACTTTGGACTCGAGTGATGACAGAGGCTGGGATAGTGGTACAAGGAAGAGAGGTCCTAAAACTCTGGTTCTTGCATTGTCAAACAATGGATCTAATGATGATTTGACCAATGTAAAAACTAAACGCAGTTATAAGAGGAGAACTCGTCAAAAGCCAGGTGCTATAAATGTGAATAATTCTGTGACTGAAACTCCTGTAGACACTGCAAAATCTAGTTCCTCTGTTAAGAAAAGCACATCATCATCAAATAGAAGACTCAGTCAACCTGCATTGGAGGTAACTTCTCCTTTTATGTTTGTGTGTATATATATTTTTTCCATTGGCTGGGATTTCCTGTTCCATTCATTGTCTTATTTGTCATGTATGTTCTTTTTCCTCTTTTCTCCGGTGGGGTTGGGAGATAAGGGTTTACTCAAAGATCTCCCATTAGTCCCCTTGCATTTAAGAATGCATTGTGATGCGTAGAGACTACATCAAAGGAGACAAATATTGGAATTACTGACAGCCATACGATCTAATATATTTGCTGTTTCAAAAAATATATCTATATAGAAAGAAACTCTTGCTAAAATAAATGTGTCATTCTAAAATTCTGAAGCCAGTCAGGTGGTCCGAATAATTGCTGAGAAACTCAAAAACAGTTTTCTTCTGTTCTTCTGTCTTTCAGTTTTCATCTCGCTTCCATGAAATTTGAAACGAAATTCAGACTGTCCTTCATGTTTCATCTCGCTTCCATGAAATTTGAAATGAAATCTGAATCCTGTATATGTTTCACATTCTCATTTAGCTAGTTATATGTAAGAAATTGAATTGTGACATGATGATTAATTTAAATTAAGATGTTATTCCTTCTTGTAACTGGAACAAAACTTTTCTTTGTTGTAGCTAATAGTGAGCATTTTAGCTCTCTTTATGCCCTTGGGTCTTCTCTTTGCAAACGGCAGTCTCAATTTTGAGCAACTATACTCTTGATTTCAACTTAGATGCTTTATTAAAATTCTATAGGTTATCAGCTTGCGTGCGTTGTTGGTTAGATTAGCAATCAGCACCCTTCCTGATCTTTGAGTTTGGACTACTTATTGTGAATATCAGTTTCCTTGCACTTGTATAGTTCACTTGGTTTTTAAAACAAACATGCCTTAGATTTTGAAACGTTAAAATGATTTGCACGCGAAACTAATCAGTTTTGAGTGAGAGGACCAAACAGGTAAGATGTAAAAGAGCCATTGAGATCTTTGTTTCTTGGTTGTGAGAAACAAAATGTATTATTAACTTCGATATATCAAGTTTTTTTATGCAGGTTCAACATTTTACTGAGAAGAAAAGATTACTATTTATTAATTTAATGCCATGCCTTGTTCCTAATATTGTCGCAAATGTTCCAGAGACTTCTTGCATCATTCCAAGAAAATGAGTATCCTAAACGAGCTACAAAGCAGAGTTTAGCACAAGAACTAGGCCTTGGTCTGAAGCAGGTTTGCATTGGGTTTCTTTGAAAGTTTTAGCTCAAATTTTATTCTATTGAAGGCTCAATAATCTATTCCATTTTCAGGTTAGCAAATGGTTTGAGAACACGCGATGGAGCACACGCCATCCCTCAAGCAGTGGTAAGAAAGCAAAAAGTTCCTCAAGAATGAGCATTTATTTATCACAGGCAAGTGGAGAACTATCCAAGAACGAGCCAGAATCTGCAACATGTTTCAGAGATACTGATAGCAATGGTGCTCGACATCAAGACTTACCAATGGCAAATAGTGTTGTGGCTTCATGTCAGAGTGGGGATACAGGGGATAAGAAATTGTCGTCTCGGAAAACTAAAAGAGCAGACTCTTCAGCCACAAAATCCAGAAAACGGAAGGGCAGGTCAGATAACACGGCATCACATTCAAAAGACAGGGAGGGATCACCAAGGCCTCCTGCCAAGTCACCTAAAGTTAATGAAATGCAAACAGCAGATAGGTTTAAGACAAGGAGGAGGAGATCCATTTAGGTTCTGAAGTATTGATGCGTTCACAGGAATTTATTCGACTATTTACCCTCTCCCAAGAAACACACTAGATCAGATGCGGGGATTGTTTGAAGGGAGGTAATTATGAGAAATCCCAATTGTTTGTAGGTCTTTGTGATCATATTGAAATTGTTCCAGATCTAATCCCTCACGCATAAATGCTTAGTCTTAGTTACTTAAATCTAGAGTTTGTTGTTAGATATTTATTTGCATTTTCAAGTGAATGTTCTCATCAGACCCTTCTCTTGATATGTGTTAAACAATCAATACGGACATCCATTTAGTTGGAGAGATCCTTCAGTTAAACAAGCCTTGTCCAGTATGAGGTGACATGAATTTATATCAGCTGGTAGTAGTCCATTTCTTGAATCTTCTGCAGGGCCATCTTTGACTTTTGCAAGCCATGCCAACTTGAACGCCCCTGGGAAGGAAGCCATGCAAATAGAACTATAGAGCTACAGCTACCCTTTGGCCTCAGAAGCGATAGATCACTTATGGAATATGGATGCAA

mRNA sequence

ATGTTTGAGACATACGGGAACGTTCCTACTGACTCAAGCGATGACACCTACGGGAGTACTTTGGACTCGAGTGATGACAGAGGCTGGGATAGTGGTACAAGGAAGAGAGGTCCTAAAACTCTGGTTCTTGCATTGTCAAACAATGGATCTAATGATGATTTGACCAATGTAAAAACTAAACGCAGTTATAAGAGGAGAACTCGTCAAAAGCCAGGTGCTATAAATGTGAATAATTCTGTGACTGAAACTCCTGTAGACACTGCAAAATCTAGTTCCTCTGTTAAGAAAAGCACATCATCATCAAATAGAAGACTCAGTCAACCTGCATTGGAGAGACTTCTTGCATCATTCCAAGAAAATGAGTATCCTAAACGAGCTACAAAGCAGAGTTTAGCACAAGAACTAGGCCTTGGTCTGAAGCAGGTTAGCAAATGGTTTGAGAACACGCGATGGAGCACACGCCATCCCTCAAGCAGTGGTAAGAAAGCAAAAAGTTCCTCAAGAATGAGCATTTATTTATCACAGGCAAGTGGAGAACTATCCAAGAACGAGCCAGAATCTGCAACATGTTTCAGAGATACTGATAGCAATGGTGCTCGACATCAAGACTTACCAATGGCAAATAGTGTTGTGGCTTCATGTCAGAGTGGGGATACAGGGGATAAGAAATTGTCGTCTCGGAAAACTAAAAGAGCAGACTCTTCAGCCACAAAATCCAGAAAACGGAAGGGCAGGTCAGATAACACGGCATCACATTCAAAAGACAGGGAGGGATCACCAAGGCCTCCTGCCAAGTCACCTAAAGTTAATGAAATGCAAACAGCAGATAGGTTTAAGACAAGGAGGAGGAGATCCATTTAG

Coding sequence (CDS)

ATGTTTGAGACATACGGGAACGTTCCTACTGACTCAAGCGATGACACCTACGGGAGTACTTTGGACTCGAGTGATGACAGAGGCTGGGATAGTGGTACAAGGAAGAGAGGTCCTAAAACTCTGGTTCTTGCATTGTCAAACAATGGATCTAATGATGATTTGACCAATGTAAAAACTAAACGCAGTTATAAGAGGAGAACTCGTCAAAAGCCAGGTGCTATAAATGTGAATAATTCTGTGACTGAAACTCCTGTAGACACTGCAAAATCTAGTTCCTCTGTTAAGAAAAGCACATCATCATCAAATAGAAGACTCAGTCAACCTGCATTGGAGAGACTTCTTGCATCATTCCAAGAAAATGAGTATCCTAAACGAGCTACAAAGCAGAGTTTAGCACAAGAACTAGGCCTTGGTCTGAAGCAGGTTAGCAAATGGTTTGAGAACACGCGATGGAGCACACGCCATCCCTCAAGCAGTGGTAAGAAAGCAAAAAGTTCCTCAAGAATGAGCATTTATTTATCACAGGCAAGTGGAGAACTATCCAAGAACGAGCCAGAATCTGCAACATGTTTCAGAGATACTGATAGCAATGGTGCTCGACATCAAGACTTACCAATGGCAAATAGTGTTGTGGCTTCATGTCAGAGTGGGGATACAGGGGATAAGAAATTGTCGTCTCGGAAAACTAAAAGAGCAGACTCTTCAGCCACAAAATCCAGAAAACGGAAGGGCAGGTCAGATAACACGGCATCACATTCAAAAGACAGGGAGGGATCACCAAGGCCTCCTGCCAAGTCACCTAAAGTTAATGAAATGCAAACAGCAGATAGGTTTAAGACAAGGAGGAGGAGATCCATTTAG

Protein sequence

MFETYGNVPTDSSDDTYGSTLDSSDDRGWDSGTRKRGPKTLVLALSNNGSNDDLTNVKTKRSYKRRTRQKPGAINVNNSVTETPVDTAKSSSSVKKSTSSSNRRLSQPALERLLASFQENEYPKRATKQSLAQELGLGLKQVSKWFENTRWSTRHPSSSGKKAKSSSRMSIYLSQASGELSKNEPESATCFRDTDSNGARHQDLPMANSVVASCQSGDTGDKKLSSRKTKRADSSATKSRKRKGRSDNTASHSKDREGSPRPPAKSPKVNEMQTADRFKTRRRRSI*
Homology
[Close]
BLAST of Csa3G199010 vs. Swiss-Prot
Match: PRH_PETCR (Pathogenesis-related homeodomain protein OS=Petroselinum crispum GN=PRH PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 4.6e-16
Identity = 58/158 (36.71%), Postives = 76/158 (48.10%), Query Frame = 1 

Query: 3   ETYGNVPTDSSDDTYGSTLDSSDDRGWDSGTRKRGPKTLVLALSNNGSNDDLTNVKTKRS 62
           E YGN  +DSSD+ Y  T  SS D+           K          S D   + K + S
Sbjct: 851 EEYGNTSSDSSDEDYMVT--SSPDKN-------NSDKEATAMERGRESGDLELDQKARES 910

Query: 63  YKRRTRQKPGAINVNNSVTETPVDTAKSSSSVKKSTSSSNRRLSQPALERLLASFQENEY 122
              R   K  A+   +S      + + +  +  KSTS +     + A +RLL SF+EN+Y
Sbjct: 911 THNRRYIKKFAVEGTDSFLSRSCEDSAAPVAGSKSTSKTLH--GEHATQRLLQSFKENQY 970

Query: 123 PKRATKQSLAQELGLGLKQVSKWFENTRWSTRHPSSSG 161
           P+RA K+SLA EL L ++QVS WF N RWS RH S  G
Sbjct: 971 PQRAVKESLAAELALSVRQVSNWFNNRRWSFRHSSRIG 997

[Close]
BLAST of Csa3G199010 vs. Swiss-Prot
Match: HAT31_ARATH (Homeobox protein HAT3.1 OS=Arabidopsis thaliana GN=HAT3.1 PE=2 SV=3)

HSP 1 Score: 82.8 bits (203), Expect = 6.7e-15
Identity = 55/152 (36.18%), Postives = 82/152 (53.95%), Query Frame = 1 

Query: 3   ETYGNVPTDSSDDTYGSTLDSSDDRGWDSGTRKRGPKTLVLALSNNGSNDDLTNV--KTK 62
           E Y NVPT SSDD      D +   G +    +    T+ L  S+N  +     +  K+K
Sbjct: 531 EEYDNVPTSSSDD---DDWDKTARMGKEDSESEDEGDTVPLKQSSNAEDHTSKKLIRKSK 590

Query: 63  RSYKRRTRQKPGAINVNNSVTETPVDTAKSSSSVKKSTSSSNRRLSQPALERLLASFQEN 122
           R+ K+ T + P          E P +    S  ++KS+SS+ ++ + P  +RL  SFQEN
Sbjct: 591 RADKKDTLEMP---------QEGPGENG-GSGEIEKSSSSACKQ-TDPKTQRLYISFQEN 650

Query: 123 EYPKRATKQSLAQELGLGLKQVSKWFENTRWS 153
           +YP +ATK+SLA+EL + +KQV+ WF++ RWS
Sbjct: 651 QYPDKATKESLAKELQMTVKQVNNWFKHRRWS 668

[Close]
BLAST of Csa3G199010 vs. Swiss-Prot
Match: HOX1A_MAIZE (Homeobox protein HOX1A OS=Zea mays GN=HOX1A PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.1e-12
Identity = 67/248 (27.02%), Postives = 104/248 (41.94%), Query Frame = 1 

Query: 3   ETYGNVPTDSSDDTYGSTLDS----SDDRGWDSGTRKRGPKTLVLALSNNGSNDDLTNVK 62
           E YG   +DSSDD   S  ++    S++ G  +    +G + +         ND+LT   
Sbjct: 481 EAYGEASSDSSDDEEWSGKNTPIIKSNEEGEANSPAGKGSRVV-------HHNDELTTQS 540

Query: 63  TKRSYKRRTRQKPGAINVNNSVTETPVDTAKSSSSVKKSTSSSNRRLSQPAL-ERLLASF 122
           TK+S            +++ SV E P D   + S+     S++ +    P + ++L   F
Sbjct: 541 TKKSLH----------SIHGSVDEKPGDLTSNGSN-----STARKGHFGPVINQKLHEHF 600

Query: 123 QENEYPKRATKQSLAQELGLGLKQVSKWFENTRWSTRHPSSSGKKAKSSSRMSIYLSQAS 182
           +   YP R+ K+SLA+ELGL  +QV+KWFE  R S R  SS    +          SQ +
Sbjct: 601 KTQPYPSRSVKESLAEELGLTFRQVNKWFETRRHSARVASSRKGISLDKHSPQNTNSQVT 660

Query: 183 GELSKNEPESATCFR-DTDSNGARHQDLPMANSVVASCQSG-DTGDKKLSSRKTKRADSS 242
             +   EPE       +   NG         +S V S   G D G  K+ S + +     
Sbjct: 661 ASMEPKEPEGTVVEESNVCLNGGTTISKEAVSSKVGSRTPGSDVGGSKVDSAEDQNPGPD 706

Query: 243 ATKSRKRK 244
             +  ++K
Sbjct: 721 LAEKARQK 706

[Close]
BLAST of Csa3G199010 vs. Swiss-Prot
Match: PRH_ARATH (Pathogenesis-related homeodomain protein OS=Arabidopsis thaliana GN=PRH PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 7.4e-06
Identity = 36/114 (31.58%), Postives = 53/114 (46.49%), Query Frame = 1 

Query: 45  LSNNGSNDDLTNVKTKRSYKRRTRQKPGAINVNNS------VTETPVDTAKSSSSVKKST 104
           L   GS D+      +R  KR +      + +  S      V ET   + + S SV+   
Sbjct: 393 LQEQGSEDEDWGPNDRRKRKRESDAGSTLVTMCESSKKDQDVVETLEQSERDSVSVENKG 452

Query: 105 SSSNR-RLSQPALERLLASFQENEYPKRATKQSLAQELGLGLKQVSKWFENTRW 152
                 RL + A+E+L   F E E P +A +  LA+EL L  ++V+KWF+NTR+
Sbjct: 453 GRRRMFRLPRNAVEKLRQVFAETELPSKAVRDRLAKELSLDPEKVNKWFKNTRY 506

[Close]
BLAST of Csa3G199010 vs. Swiss-Prot
Match: HME2B_XENLA (Homeobox protein engrailed-2-B OS=Xenopus laevis GN=en2-b PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 9.7e-06
Identity = 32/86 (37.21%), Postives = 42/86 (48.84%), Query Frame = 1 

Query: 81  TETPVDTAKSSSSVKKSTSSSNRR----LSQPALERLLASFQENEYPKRATKQSLAQELG 140
           ++ P    +S    KKS S  ++R     +   L+RL A FQ N Y     +QSLAQELG
Sbjct: 155 SDRPSSGPRSRKPKKKSVSKEDKRPRTAFTAEQLQRLKAEFQTNRYLTEQRRQSLAQELG 214

Query: 141 LGLKQVSKWFENTRWSTRHPSSSGKK 163
           L   Q+  WF+N R   +   S+G K
Sbjct: 215 LNESQIKIWFQNKR--AKIKKSTGNK 238

[Close]
BLAST of Csa3G199010 vs. TrEMBL
Match: A0A0A0L6Y1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G199010 PE=4 SV=1)

HSP 1 Score: 566.6 bits (1459), Expect = 1.7e-158
Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 1 

Query: 1   MFETYGNVPTDSSDDTYGSTLDSSDDRGWDSGTRKRGPKTLVLALSNNGSNDDLTNVKTK 60
           MFETYGNVPTDSSDDTYGSTLDSSDDRGWDSGTRKRGPKTLVLALSNNGSNDDLTNVKTK
Sbjct: 1   MFETYGNVPTDSSDDTYGSTLDSSDDRGWDSGTRKRGPKTLVLALSNNGSNDDLTNVKTK 60

Query: 61  RSYKRRTRQKPGAINVNNSVTETPVDTAKSSSSVKKSTSSSNRRLSQPALERLLASFQEN 120
           RSYKRRTRQKPGAINVNNSVTETPVDTAKSSSSVKKSTSSSNRRLSQPALERLLASFQEN
Sbjct: 61  RSYKRRTRQKPGAINVNNSVTETPVDTAKSSSSVKKSTSSSNRRLSQPALERLLASFQEN 120

Query: 121 EYPKRATKQSLAQELGLGLKQVSKWFENTRWSTRHPSSSGKKAKSSSRMSIYLSQASGEL 180
           EYPKRATKQSLAQELGLGLKQVSKWFENTRWSTRHPSSSGKKAKSSSRMSIYLSQASGEL
Sbjct: 121 EYPKRATKQSLAQELGLGLKQVSKWFENTRWSTRHPSSSGKKAKSSSRMSIYLSQASGEL 180

Query: 181 SKNEPESATCFRDTDSNGARHQDLPMANSVVASCQSGDTGDKKLSSRKTKRADSSATKSR 240
           SKNEPESATCFRDTDSNGARHQDLPMANSVVASCQSGDTGDKKLSSRKTKRADSSATKSR
Sbjct: 181 SKNEPESATCFRDTDSNGARHQDLPMANSVVASCQSGDTGDKKLSSRKTKRADSSATKSR 240

Query: 241 KRKGRSDNTASHSKDREGSPRPPAKSPKVNEMQTADRFKTRRRRSI 287
           KRKGRSDNTASHSKDREGSPRPPAKSPKVNEMQTADRFKTRRRRSI
Sbjct: 241 KRKGRSDNTASHSKDREGSPRPPAKSPKVNEMQTADRFKTRRRRSI 286

[Close]
BLAST of Csa3G199010 vs. TrEMBL
Match: A0A067L7L0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16279 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.0e-34
Identity = 113/304 (37.17%), Postives = 152/304 (50.00%), Query Frame = 1 

Query: 3    ETYGNVPTDSSDD---------------TYGSTL-DSSDDRGW--DSGTRKRGPKTLVLA 62
            ETYGN  +DSSDD               TYGST  DSSDD  +  D   RKR   T V  
Sbjct: 710  ETYGNASSDSSDDEDFTDDVEPRKRRKETYGSTSSDSSDDEDFIDDVEPRKRRRSTEVGQ 769

Query: 63   LSNNGSNDDLTNVKTKRSYKRRTRQKPGAINVNNSVTETPVDTAKSSSSVKKSTSSSNRR 122
             S N +N  ++    + +  +R RQK    N + S T+     + SSSS K   SS  RR
Sbjct: 770  ASVN-ANAFVSKTAKQDTTPKRHRQKSKFANTSTSSTKGHEGASPSSSSGKPVKSSGYRR 829

Query: 123  LSQPALERLLASFQENEYPKRATKQSLAQELGLGLKQVSKWFENTRWSTRH-PSSSGKKA 182
            L +   + L  SF+EN+YP RA K+SLA+ELG+  +QVSKWFENTRWS  H PS+     
Sbjct: 830  LGETVTQGLYKSFKENQYPDRAKKESLAKELGITFQQVSKWFENTRWSFNHPPSTDASTV 889

Query: 183  KSSSRMSIYLSQASGELSKNEPESATCFRDTDSNGARHQDLPMANSVVASCQSGDTGDKK 242
            + +++    L + + EL   EPE     R+T SNGA+ ++ P  +        GDT D K
Sbjct: 890  RKTTKEDSQLPKTNTELCTPEPEKIC--RNTTSNGAQSEESPKVDDATGGSYIGDTRDTK 949

Query: 243  LSSRKTKRADSSATKSRKRKGRSDNTASHSKDREGS-PRPPAKSPKVNEMQTADRFKTRR 287
            + S+++ +  S    SRKRK  SD          G   + P   PK  E     R  T R
Sbjct: 950  MGSQESCKQKSKTPDSRKRKHISDPRTLDPYSTIGEMEKIPVNLPKSQEKPAGGR--TTR 1008

[Close]
BLAST of Csa3G199010 vs. TrEMBL
Match: W9R947_9ROSA (Homeobox protein OS=Morus notabilis GN=L484_011492 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.8e-27
Identity = 97/289 (33.56%), Postives = 139/289 (48.10%), Query Frame = 1 

Query: 3    ETYGNVPTDSSDDTYGSTLDSSDDRGWDSG-TRKRGPKTLVLALSNNGSNDDLTNVKTKR 62
            ETYG++P+DSSDD   +   +   R   +G      P      + N  + D   N     
Sbjct: 755  ETYGHLPSDSSDDEDWTDYAAPRKRKRTTGQVSSVSPNENASIIKNQTTTDAANNDLEDN 814

Query: 63   SY--KRRTRQKPGAINVNNSVTETPVDTAKSSSSVKKSTSSSNRRLSQPALERLLASFQE 122
             Y  +RR+RQ     + NN   +    + KS S+ ++   S+NRRL +   +RL  SF+E
Sbjct: 815  EYVPRRRSRQNSVVTDENNIPNKLLQGSPKSGSTGRRRELSTNRRLGEAVTQRLYQSFKE 874

Query: 123  NEYPKRATKQSLAQELGLGLKQVSKWFENTRWSTRHPSSSGKK---AKSSSRMSIYLSQA 182
            N+Y  RATK+SLAQELGL   QVSKWFEN RWS RH  SS KK   ++ +S+ S    Q 
Sbjct: 875  NQYLDRATKESLAQELGLTSYQVSKWFENARWSYRH--SSSKKPGISEHASKESTLSPQT 934

Query: 183  SGELSKNEPESATCFRDTDSNGARHQDLPMANSVVASCQSGDTGDKKLSSRKTKRADSSA 242
            + +L   E E  T   ++  NGA + +LP   + +    SGD GD K+     + +  ++
Sbjct: 935  NKKLF--ETELNTSITNSTCNGALNNELPRTGNAMPESCSGDVGDGKVEMPTKESSGQTS 994

Query: 243  TKSRKRKGRSDNTASHSKDREGSPRPPAKSPKVNEMQTADRFKTRRRRS 286
            T    RK            R      P   P V+  +T  R + R R S
Sbjct: 995  TTPGSRK----------TGRPWKVERPETPPVVDTHETGGRKRGRHRES 1029

[Close]
BLAST of Csa3G199010 vs. TrEMBL
Match: F6H698_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g00290 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.9e-26
Identity = 88/250 (35.20%), Postives = 123/250 (49.20%), Query Frame = 1 

Query: 14  DDTYGS-TLDSSDDRGWDSGTRKRGPKTL---VLALSNNGSN---DDLTNVKTKR----- 73
           D+ YG+ + DSSDD  W      R  K L   V ++S NG+    ++ TN K  +     
Sbjct: 572 DEAYGNVSSDSSDDEDWTENVIPRKRKNLSGNVASVSPNGNTSITENGTNTKDIKHDLEA 631

Query: 74  ---SYKRRTRQKPGAINVNNSVTETPVDTAKSSSSVKKSTSSSNRRLSQPALERLLASFQ 133
              + KRRTRQK    + NNS+ E+  D+    S+ +KS  SS ++L +   ERL  SFQ
Sbjct: 632 AGCTPKRRTRQKLNFESTNNSLAESHKDSRSPGSTGEKSGQSSYKKLGEAVTERLYKSFQ 691

Query: 134 ENEYPKRATKQSLAQELGLGLKQVSKWFENTRWSTRH-PSSSGKKAKSSSRMSIYLSQAS 193
           EN+YP RA K+ LA+ELG+  +QVSKWFEN RWS RH P       KS+ +       AS
Sbjct: 692 ENQYPDRAMKEKLAEELGITSRQVSKWFENARWSFRHRPPKEASAGKSAVK-----KDAS 751

Query: 194 GELSKNEPESATCFRDTDSNGARHQDLPMANSVVASCQSGDTGDKKLSSRKTKRADSSAT 248
              +  +PE     R++  NG   ++ P A            G  K+   K   A  SA 
Sbjct: 752 TSQTDQKPEQEVVLRESSHNGVGKKESPKA------------GASKVDRSKEANAGKSAV 804

[Close]
BLAST of Csa3G199010 vs. TrEMBL
Match: F6H698_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g00290 PE=4 SV=1)

HSP 1 Score: 40.8 bits (94), Expect = 3.3e+00
Identity = 40/191 (20.94%), Postives = 78/191 (40.84%), Query Frame = 1 

Query: 84  PVDTAKSSSSVKKSTSSSNRRLSQPALERLLASFQENEYPKRATKQSLAQELGLGLKQVS 143
           P + +   S+VKK  S+S                Q ++ P++      +   G+G K+  
Sbjct: 731 PKEASAGKSAVKKDASTS----------------QTDQKPEQEVVLRESSHNGVGKKESP 790

Query: 144 KWFENTRWSTRHPSSSGKKAKSSSRMSIYLSQASGELSKNEPESATCFRDTDSNGARHQD 203
           K            S   +  ++++  S     AS   +  +PE     +++  NG   ++
Sbjct: 791 K---------AGASKVDRSKEANAGKSAVKKDASTSQTDQKPEQEVVIKESSHNGVGKKE 850

Query: 204 LPMANSVVASCQSGDTGDKKLSSRKTKRADSSATKSRKRKGRSDNTASHSKDREGSPRPP 263
              A +      SG    +KL++  + R  SS   S ++K +S++ AS + +  GS R  
Sbjct: 851 STKAGASKVDRCSGAKRRRKLATDGSHRQKSSTPNSTRQKTKSNHEASEATN--GSRRQN 894

Query: 264 AKSPKVNEMQT 275
           + +PK    +T
Sbjct: 911 SSTPKSRRQKT 894


HSP 2 Score: 118.6 bits (296), Expect = 1.2e-23
Identity = 102/299 (34.11%), Postives = 138/299 (46.15%), Query Frame = 1 

Query: 3    ETYGNVPTDSSDDTYGSTLDSSDDRGWDSGTRKRGPKTLVLALSNNGSNDDLTNV----- 62
            ETYGNVP DSSDD   S          D G RKR   T      ++ S D  T V     
Sbjct: 789  ETYGNVPYDSSDDESWSD---------DGGPRKRTKSTKE---GSSASPDGKTPVIRRRK 848

Query: 63   ----------KTKRSYKRRTRQKPGAINVNNSVTETPVDTAKSSSSVKKSTSSSNRRLSQ 122
                      +T+ + KRR R K    + N S  ++    +   S  ++  +S  R+L +
Sbjct: 849  STKAAKEKLNETENTPKRRGRPKLNTEDSNISPAKSHEGCSTPGSRGRRHRTSY-RKLGE 908

Query: 123  PALERLLASFQENEYPKRATKQSLAQELGLGLKQVSKWFENTRWSTRHPSSSGKKAKSSS 182
               ++L  SF+EN+YP R TK+SLA+ELGL   QV KWFENTRWS  HPSS   K  +S 
Sbjct: 909  EVTQKLYNSFKENQYPNRTTKESLAKELGLTFSQVRKWFENTRWSFNHPSSKNAKLANSE 968

Query: 183  RMSIYLSQASGELSKNEPESATCFRDTDSNGARHQDLPMANSVVASCQSGDTGDKKLSSR 242
            +        + + +KN     T  R ++ NGA +            C +GD  +      
Sbjct: 969  K-----GTCTPQSNKN-----TVGRVSNCNGAENVQSSKTGVDDTGCMTGDVKNNTQECN 1028

Query: 243  KTKRADSSATKSRKRKGRSDNTASH-SKDREGSPRPPAKSPKVNEMQTADRFKTRRRRS 286
              K   S  ++ R R G+S + AS  S   E      A SPKV E+Q   R  TRRRR+
Sbjct: 1029 SIK-PTSQTSRKRDRDGKSGDQASDPSSKMEVIQGLSANSPKV-EVQANGR--TRRRRN 1060

[Close]
BLAST of Csa3G199010 vs. TAIR10
Match: AT3G19510.1 (AT3G19510.1 Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain)

HSP 1 Score: 82.8 bits (203), Expect = 3.8e-16
Identity = 55/152 (36.18%), Postives = 82/152 (53.95%), Query Frame = 1 

Query: 3   ETYGNVPTDSSDDTYGSTLDSSDDRGWDSGTRKRGPKTLVLALSNNGSNDDLTNV--KTK 62
           E Y NVPT SSDD      D +   G +    +    T+ L  S+N  +     +  K+K
Sbjct: 531 EEYDNVPTSSSDD---DDWDKTARMGKEDSESEDEGDTVPLKQSSNAEDHTSKKLIRKSK 590

Query: 63  RSYKRRTRQKPGAINVNNSVTETPVDTAKSSSSVKKSTSSSNRRLSQPALERLLASFQEN 122
           R+ K+ T + P          E P +    S  ++KS+SS+ ++ + P  +RL  SFQEN
Sbjct: 591 RADKKDTLEMP---------QEGPGENG-GSGEIEKSSSSACKQ-TDPKTQRLYISFQEN 650

Query: 123 EYPKRATKQSLAQELGLGLKQVSKWFENTRWS 153
           +YP +ATK+SLA+EL + +KQV+ WF++ RWS
Sbjct: 651 QYPDKATKESLAKELQMTVKQVNNWFKHRRWS 668

[Close]
BLAST of Csa3G199010 vs. TAIR10
Match: AT4G29940.1 (AT4G29940.1 pathogenesis related homeodomain protein A)

HSP 1 Score: 52.8 bits (125), Expect = 4.2e-07
Identity = 36/114 (31.58%), Postives = 53/114 (46.49%), Query Frame = 1 

Query: 45  LSNNGSNDDLTNVKTKRSYKRRTRQKPGAINVNNS------VTETPVDTAKSSSSVKKST 104
           L   GS D+      +R  KR +      + +  S      V ET   + + S SV+   
Sbjct: 393 LQEQGSEDEDWGPNDRRKRKRESDAGSTLVTMCESSKKDQDVVETLEQSERDSVSVENKG 452

Query: 105 SSSNR-RLSQPALERLLASFQENEYPKRATKQSLAQELGLGLKQVSKWFENTRW 152
                 RL + A+E+L   F E E P +A +  LA+EL L  ++V+KWF+NTR+
Sbjct: 453 GRRRMFRLPRNAVEKLRQVFAETELPSKAVRDRLAKELSLDPEKVNKWFKNTRY 506

[Close]
BLAST of Csa3G199010 vs. NCBI nr
Match: gi|700202355|gb|KGN57488.1| (hypothetical protein Csa_3G199010 [Cucumis sativus])

HSP 1 Score: 566.6 bits (1459), Expect = 2.4e-158
Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 1 

Query: 1   MFETYGNVPTDSSDDTYGSTLDSSDDRGWDSGTRKRGPKTLVLALSNNGSNDDLTNVKTK 60
           MFETYGNVPTDSSDDTYGSTLDSSDDRGWDSGTRKRGPKTLVLALSNNGSNDDLTNVKTK
Sbjct: 1   MFETYGNVPTDSSDDTYGSTLDSSDDRGWDSGTRKRGPKTLVLALSNNGSNDDLTNVKTK 60

Query: 61  RSYKRRTRQKPGAINVNNSVTETPVDTAKSSSSVKKSTSSSNRRLSQPALERLLASFQEN 120
           RSYKRRTRQKPGAINVNNSVTETPVDTAKSSSSVKKSTSSSNRRLSQPALERLLASFQEN
Sbjct: 61  RSYKRRTRQKPGAINVNNSVTETPVDTAKSSSSVKKSTSSSNRRLSQPALERLLASFQEN 120

Query: 121 EYPKRATKQSLAQELGLGLKQVSKWFENTRWSTRHPSSSGKKAKSSSRMSIYLSQASGEL 180
           EYPKRATKQSLAQELGLGLKQVSKWFENTRWSTRHPSSSGKKAKSSSRMSIYLSQASGEL
Sbjct: 121 EYPKRATKQSLAQELGLGLKQVSKWFENTRWSTRHPSSSGKKAKSSSRMSIYLSQASGEL 180

Query: 181 SKNEPESATCFRDTDSNGARHQDLPMANSVVASCQSGDTGDKKLSSRKTKRADSSATKSR 240
           SKNEPESATCFRDTDSNGARHQDLPMANSVVASCQSGDTGDKKLSSRKTKRADSSATKSR
Sbjct: 181 SKNEPESATCFRDTDSNGARHQDLPMANSVVASCQSGDTGDKKLSSRKTKRADSSATKSR 240

Query: 241 KRKGRSDNTASHSKDREGSPRPPAKSPKVNEMQTADRFKTRRRRSI 287
           KRKGRSDNTASHSKDREGSPRPPAKSPKVNEMQTADRFKTRRRRSI
Sbjct: 241 KRKGRSDNTASHSKDREGSPRPPAKSPKVNEMQTADRFKTRRRRSI 286

[Close]
BLAST of Csa3G199010 vs. NCBI nr
Match: gi|778679986|ref|XP_011651230.1| (PREDICTED: homeobox protein HOX1A [Cucumis sativus])

HSP 1 Score: 562.4 bits (1448), Expect = 4.6e-157
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 1 

Query: 3    ETYGNVPTDSSDDTYGSTLDSSDDRGWDSGTRKRGPKTLVLALSNNGSNDDLTNVKTKRS 62
            ETYGNVPTDSSDDTYGSTLDSSDDRGWDSGTRKRGPKTLVLALSNNGSNDDLTNVKTKRS
Sbjct: 756  ETYGNVPTDSSDDTYGSTLDSSDDRGWDSGTRKRGPKTLVLALSNNGSNDDLTNVKTKRS 815

Query: 63   YKRRTRQKPGAINVNNSVTETPVDTAKSSSSVKKSTSSSNRRLSQPALERLLASFQENEY 122
            YKRRTRQKPGAINVNNSVTETPVDTAKSSSSVKKSTSSSNRRLSQPALERLLASFQENEY
Sbjct: 816  YKRRTRQKPGAINVNNSVTETPVDTAKSSSSVKKSTSSSNRRLSQPALERLLASFQENEY 875

Query: 123  PKRATKQSLAQELGLGLKQVSKWFENTRWSTRHPSSSGKKAKSSSRMSIYLSQASGELSK 182
            PKRATKQSLAQELGLGLKQVSKWFENTRWSTRHPSSSGKKAKSSSRMSIYLSQASGELSK
Sbjct: 876  PKRATKQSLAQELGLGLKQVSKWFENTRWSTRHPSSSGKKAKSSSRMSIYLSQASGELSK 935

Query: 183  NEPESATCFRDTDSNGARHQDLPMANSVVASCQSGDTGDKKLSSRKTKRADSSATKSRKR 242
            NEPESATCFRDTDSNGARHQDLPMANSVVASCQSGDTGDKKLSSRKTKRADSSATKSRKR
Sbjct: 936  NEPESATCFRDTDSNGARHQDLPMANSVVASCQSGDTGDKKLSSRKTKRADSSATKSRKR 995

Query: 243  KGRSDNTASHSKDREGSPRPPAKSPKVNEMQTADRFKTRRRRSI 287
            KGRSDNTASHSKDREGSPRPPAKSPKVNEMQTADRFKTRRRRSI
Sbjct: 996  KGRSDNTASHSKDREGSPRPPAKSPKVNEMQTADRFKTRRRRSI 1039

[Close]
BLAST of Csa3G199010 vs. NCBI nr
Match: gi|659112354|ref|XP_008456180.1| (PREDICTED: homeobox protein HAT3.1 isoform X2 [Cucumis melo])

HSP 1 Score: 529.3 bits (1362), Expect = 4.3e-147
Identity = 267/284 (94.01%), Postives = 276/284 (97.18%), Query Frame = 1 

Query: 3    ETYGNVPTDSSDDTYGSTLDSSDDRGWDSGTRKRGPKTLVLALSNNGSNDDLTNVKTKRS 62
            ETYGNVPT+SSDDTYGSTLDSSDDRG DSGTRKRGPKTLVLALSNNGSNDDLTNVKTKRS
Sbjct: 721  ETYGNVPTESSDDTYGSTLDSSDDRGCDSGTRKRGPKTLVLALSNNGSNDDLTNVKTKRS 780

Query: 63   YKRRTRQKPGAINVNNSVTETPVDTAKSSSSVKKSTSSSNRRLSQPALERLLASFQENEY 122
            YKRRTRQKPGAINVNNSVTETPVDTAKSSSSV++ TSSSNRRLSQPALERL ASFQENEY
Sbjct: 781  YKRRTRQKPGAINVNNSVTETPVDTAKSSSSVRQCTSSSNRRLSQPALERLFASFQENEY 840

Query: 123  PKRATKQSLAQELGLGLKQVSKWFENTRWSTRHPSSSGKKAKSSSRMSIYLSQASGELSK 182
            PKRATK+SLAQELGL LKQVSKWFENTRWSTRHPSS GKKAKSSSRMSI+LSQASGELSK
Sbjct: 841  PKRATKESLAQELGLNLKQVSKWFENTRWSTRHPSSGGKKAKSSSRMSIHLSQASGELSK 900

Query: 183  NEPESATCFRDTDSNGARHQDLPMANSVVASCQSGDTGDKKLSSRKTKRADSSATKSRKR 242
            NE ESATCFRDTDSNGARHQDLPMANSVVASCQSGDTGDKKL++RKTKR +SSATKSRKR
Sbjct: 901  NEQESATCFRDTDSNGARHQDLPMANSVVASCQSGDTGDKKLTTRKTKRGESSATKSRKR 960

Query: 243  KGRSDNTASHSKDREGSPRPPAKSPKVNEMQTADRFKTRRRRSI 287
            KGRSDNTAS+SKDREGSPRPPAKSPKVNE QTADRFKTRRRRSI
Sbjct: 961  KGRSDNTASNSKDREGSPRPPAKSPKVNETQTADRFKTRRRRSI 1004

[Close]
BLAST of Csa3G199010 vs. NCBI nr
Match: gi|659112348|ref|XP_008456177.1| (PREDICTED: pathogenesis-related homeodomain protein isoform X1 [Cucumis melo])

HSP 1 Score: 529.3 bits (1362), Expect = 4.3e-147
Identity = 267/284 (94.01%), Postives = 276/284 (97.18%), Query Frame = 1 

Query: 3    ETYGNVPTDSSDDTYGSTLDSSDDRGWDSGTRKRGPKTLVLALSNNGSNDDLTNVKTKRS 62
            ETYGNVPT+SSDDTYGSTLDSSDDRG DSGTRKRGPKTLVLALSNNGSNDDLTNVKTKRS
Sbjct: 779  ETYGNVPTESSDDTYGSTLDSSDDRGCDSGTRKRGPKTLVLALSNNGSNDDLTNVKTKRS 838

Query: 63   YKRRTRQKPGAINVNNSVTETPVDTAKSSSSVKKSTSSSNRRLSQPALERLLASFQENEY 122
            YKRRTRQKPGAINVNNSVTETPVDTAKSSSSV++ TSSSNRRLSQPALERL ASFQENEY
Sbjct: 839  YKRRTRQKPGAINVNNSVTETPVDTAKSSSSVRQCTSSSNRRLSQPALERLFASFQENEY 898

Query: 123  PKRATKQSLAQELGLGLKQVSKWFENTRWSTRHPSSSGKKAKSSSRMSIYLSQASGELSK 182
            PKRATK+SLAQELGL LKQVSKWFENTRWSTRHPSS GKKAKSSSRMSI+LSQASGELSK
Sbjct: 899  PKRATKESLAQELGLNLKQVSKWFENTRWSTRHPSSGGKKAKSSSRMSIHLSQASGELSK 958

Query: 183  NEPESATCFRDTDSNGARHQDLPMANSVVASCQSGDTGDKKLSSRKTKRADSSATKSRKR 242
            NE ESATCFRDTDSNGARHQDLPMANSVVASCQSGDTGDKKL++RKTKR +SSATKSRKR
Sbjct: 959  NEQESATCFRDTDSNGARHQDLPMANSVVASCQSGDTGDKKLTTRKTKRGESSATKSRKR 1018

Query: 243  KGRSDNTASHSKDREGSPRPPAKSPKVNEMQTADRFKTRRRRSI 287
            KGRSDNTAS+SKDREGSPRPPAKSPKVNE QTADRFKTRRRRSI
Sbjct: 1019 KGRSDNTASNSKDREGSPRPPAKSPKVNETQTADRFKTRRRRSI 1062

[Close]
BLAST of Csa3G199010 vs. NCBI nr
Match: gi|643738525|gb|KDP44446.1| (hypothetical protein JCGZ_16279 [Jatropha curcas])

HSP 1 Score: 154.5 bits (389), Expect = 2.9e-34
Identity = 113/304 (37.17%), Postives = 152/304 (50.00%), Query Frame = 1 

Query: 3    ETYGNVPTDSSDD---------------TYGSTL-DSSDDRGW--DSGTRKRGPKTLVLA 62
            ETYGN  +DSSDD               TYGST  DSSDD  +  D   RKR   T V  
Sbjct: 710  ETYGNASSDSSDDEDFTDDVEPRKRRKETYGSTSSDSSDDEDFIDDVEPRKRRRSTEVGQ 769

Query: 63   LSNNGSNDDLTNVKTKRSYKRRTRQKPGAINVNNSVTETPVDTAKSSSSVKKSTSSSNRR 122
             S N +N  ++    + +  +R RQK    N + S T+     + SSSS K   SS  RR
Sbjct: 770  ASVN-ANAFVSKTAKQDTTPKRHRQKSKFANTSTSSTKGHEGASPSSSSGKPVKSSGYRR 829

Query: 123  LSQPALERLLASFQENEYPKRATKQSLAQELGLGLKQVSKWFENTRWSTRH-PSSSGKKA 182
            L +   + L  SF+EN+YP RA K+SLA+ELG+  +QVSKWFENTRWS  H PS+     
Sbjct: 830  LGETVTQGLYKSFKENQYPDRAKKESLAKELGITFQQVSKWFENTRWSFNHPPSTDASTV 889

Query: 183  KSSSRMSIYLSQASGELSKNEPESATCFRDTDSNGARHQDLPMANSVVASCQSGDTGDKK 242
            + +++    L + + EL   EPE     R+T SNGA+ ++ P  +        GDT D K
Sbjct: 890  RKTTKEDSQLPKTNTELCTPEPEKIC--RNTTSNGAQSEESPKVDDATGGSYIGDTRDTK 949

Query: 243  LSSRKTKRADSSATKSRKRKGRSDNTASHSKDREGS-PRPPAKSPKVNEMQTADRFKTRR 287
            + S+++ +  S    SRKRK  SD          G   + P   PK  E     R  T R
Sbjct: 950  MGSQESCKQKSKTPDSRKRKHISDPRTLDPYSTIGEMEKIPVNLPKSQEKPAGGR--TTR 1008

The following BLAST results are available for this feature:
BLAST of Csa3G199010 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PRH_PETCR4.6e-1636.71Pathogenesis-related homeodomain protein OS=Petroselinum crispum GN=PRH PE=2 SV=... [more]
HAT31_ARATH6.7e-1536.18Homeobox protein HAT3.1 OS=Arabidopsis thaliana GN=HAT3.1 PE=2 SV=3[more]
HOX1A_MAIZE4.1e-1227.02Homeobox protein HOX1A OS=Zea mays GN=HOX1A PE=2 SV=1[more]
PRH_ARATH7.4e-0631.58Pathogenesis-related homeodomain protein OS=Arabidopsis thaliana GN=PRH PE=2 SV=... [more]
HME2B_XENLA9.7e-0637.21Homeobox protein engrailed-2-B OS=Xenopus laevis GN=en2-b PE=2 SV=1[more]
BLAST of Csa3G199010 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6Y1_CUCSA1.7e-158100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G199010 PE=4 SV=1[more]
A0A067L7L0_JATCU2.0e-3437.17Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16279 PE=4 SV=1[more]
W9R947_9ROSA1.8e-2733.56Homeobox protein OS=Morus notabilis GN=L484_011492 PE=4 SV=1[more]
F6H698_VITVI5.9e-2635.20Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g00290 PE=4 SV=... [more]
F6H698_VITVI3.3e+0020.94Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0091g00290 PE=4 SV=... [more]
BLAST of Csa3G199010 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G19510.13.8e-1636.18 Homeodomain-like protein with RING/FYVE/PHD-type zinc finger domain[more]
AT4G29940.14.2e-0731.58 pathogenesis related homeodomain protein A[more]
BLAST of Csa3G199010 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202355|gb|KGN57488.1|2.4e-158100.00hypothetical protein Csa_3G199010 [Cucumis sativus][more]
gi|778679986|ref|XP_011651230.1|4.6e-157100.00PREDICTED: homeobox protein HOX1A [Cucumis sativus][more]
gi|659112354|ref|XP_008456180.1|4.3e-14794.01PREDICTED: homeobox protein HAT3.1 isoform X2 [Cucumis melo][more]
gi|659112348|ref|XP_008456177.1|4.3e-14794.01PREDICTED: pathogenesis-related homeodomain protein isoform X1 [Cucumis melo][more]
gi|643738525|gb|KDP44446.1|2.9e-3437.17hypothetical protein JCGZ_16279 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR009057Homeobox-like_sf
IPR017970Homeobox_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003677 DNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU095155cucumber EST collection version 3.0transcribed_cluster
CU148730cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G199010.1Csa3G199010.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU148730CU148730transcribed_cluster
CU095155CU095155transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001356Homeobox domainPFAMPF00046Homeoboxcoord: 104..154
score: 3.4
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 99..160
score: 1.3
IPR001356Homeobox domainPROFILEPS50071HOMEOBOX_2coord: 96..156
score: 13
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 90..150
score: 7.2
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 91..156
score: 4.28
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 131..154
scor
NoneNo IPR availablePANTHERPTHR12628POLYCOMB-LIKE TRANSCRIPTION FACTORcoord: 3..171
score: 5.7
NoneNo IPR availablePANTHERPTHR12628:SF13HOMEOBOX PROTEIN HAT3.1coord: 3..171
score: 5.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G199010CSPI03G18040Wild cucumber (PI 183967)cpicuB120
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G199010Watermelon (97103) v1cuwmB243
Csa3G199010Cucurbita pepo (Zucchini)cpecuB205
Csa3G199010Cucurbita pepo (Zucchini)cpecuB389
Csa3G199010Bottle gourd (USVL1VR-Ls)culsiB211
Csa3G199010Cucumber (Gy14) v2cgybcuB109
Csa3G199010Melon (DHL92) v3.6.1cumedB238
Csa3G199010Melon (DHL92) v3.6.1cumedB255
Csa3G199010Silver-seed gourdcarcuB0320
Csa3G199010Silver-seed gourdcarcuB0400
Csa3G199010Watermelon (97103) v2cuwmbB215
Csa3G199010Wax gourdcuwgoB283
Csa3G199010Cucumber (Gy14) v1cgycuB132
Csa3G199010Cucurbita maxima (Rimu)cmacuB320
Csa3G199010Cucurbita maxima (Rimu)cmacuB697
Csa3G199010Cucurbita moschata (Rifu)cmocuB307
Csa3G199010Cucurbita moschata (Rifu)cmocuB687
Csa3G199010Melon (DHL92) v3.5.1cumeB166
Csa3G199010Melon (DHL92) v3.5.1cumeB265
Csa3G199010Watermelon (Charleston Gray)cuwcgB211
Csa3G199010Watermelon (Charleston Gray)cuwcgB230