CU141457 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU141457
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 29619295 .. 29619550 (+)
Sequence length260
The following sequences are available for this feature:

transcribed_cluster sequence

GAAATGGAGCAGTAACGACGAGTCTGGTAGTGTAGAAAATGATAATTTATTATCATCAGAGGGAGTTGACGATAGCCTCTCTAGAGAGCATCAAAATGATGATCATAGTAGTGATAGAAATTAGTGAGCATAACTCATTTTTGTTCCCTCATTCTTACAACACCATATAGAAGGTGAAGGATTAAATTGAAAACGCGGGAAAAAGCATACAAACAAAACAAATAAAACTAACGTTATAATATTTCACAGATGAAGAGAGG
Library categoryESTs
gynoecious flower library1
BLAST of CU141457 vs. TrEMBL
Match: A0A0A0LEI5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G769670 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.6e-14
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 2

Query: 2   KWSSNDESGSVENDNLLSSEGVDDSLSREHQNDDHSSDRN 61
           KWSSNDESGSVENDNLLSSEGVDDSLSREHQNDDHSSDRN
Sbjct: 456 KWSSNDESGSVENDNLLSSEGVDDSLSREHQNDDHSSDRN 495

Query: 62  121
           
Sbjct: 516 495

BLAST of CU141457 vs. NCBI nr
Match: gi|700203969|gb|KGN59102.1| (hypothetical protein Csa_3G769670 [Cucumis sativus])

HSP 1 Score: 80.5 bits (197), Expect = 1.6e-12
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 2

Query: 2   KWSSNDESGSVENDNLLSSEGVDDSLSREHQNDDHSSDRN 61
           KWSSNDESGSVENDNLLSSEGVDDSLSREHQNDDHSSDRN
Sbjct: 456 KWSSNDESGSVENDNLLSSEGVDDSLSREHQNDDHSSDRN 495

Query: 62  121
           
Sbjct: 516 495

BLAST of CU141457 vs. NCBI nr
Match: gi|449465505|ref|XP_004150468.1| (PREDICTED: DUF21 domain-containing protein At1g55930, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 80.5 bits (197), Expect = 1.6e-12
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 2

Query: 2   KWSSNDESGSVENDNLLSSEGVDDSLSREHQNDDHSSDRN 61
           KWSSNDESGSVENDNLLSSEGVDDSLSREHQNDDHSSDRN
Sbjct: 616 KWSSNDESGSVENDNLLSSEGVDDSLSREHQNDDHSSDRN 655

Query: 62  121
           
Sbjct: 676 655

BLAST of CU141457 vs. NCBI nr
Match: gi|778684204|ref|XP_011651999.1| (PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 80.5 bits (197), Expect = 1.6e-12
Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 2

Query: 2   KWSSNDESGSVENDNLLSSEGVDDSLSREHQNDDHSSDRN 61
           KWSSNDESGSVENDNLLSSEGVDDSLSREHQNDDHSSDRN
Sbjct: 424 KWSSNDESGSVENDNLLSSEGVDDSLSREHQNDDHSSDRN 463

Query: 62  121
           
Sbjct: 484 463

BLAST of CU141457 vs. NCBI nr
Match: gi|659126013|ref|XP_008462967.1| (PREDICTED: DUF21 domain-containing protein At1g55930, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 79.0 bits (193), Expect = 4.6e-12
Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 2

Query: 2   KWSSNDESGSVENDNLLSSEGVDDSLSREHQNDDHSSDRN 61
           KWSSNDESGSVENDNLLSSEGVD+SLSREHQNDDHSSDRN
Sbjct: 616 KWSSNDESGSVENDNLLSSEGVDESLSREHQNDDHSSDRN 655

Query: 62  121
           
Sbjct: 676 655

BLAST of CU141457 vs. NCBI nr
Match: gi|659126017|ref|XP_008462970.1| (PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 79.0 bits (193), Expect = 4.6e-12
Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 2

Query: 2   KWSSNDESGSVENDNLLSSEGVDDSLSREHQNDDHSSDRN 61
           KWSSNDESGSVENDNLLSSEGVD+SLSREHQNDDHSSDRN
Sbjct: 424 KWSSNDESGSVENDNLLSSEGVDESLSREHQNDDHSSDRN 463

Query: 62  121
           
Sbjct: 484 463

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LEI5_CUCSA2.6e-14100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G769670 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700203969|gb|KGN59102.1|1.6e-12100.00hypothetical protein Csa_3G769670 [Cucumis sativus][more]
gi|449465505|ref|XP_004150468.1|1.6e-12100.00PREDICTED: DUF21 domain-containing protein At1g55930, chloroplastic isoform X1 [... [more]
gi|778684204|ref|XP_011651999.1|1.6e-12100.00PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic iso... [more]
gi|659126013|ref|XP_008462967.1|4.6e-1297.50PREDICTED: DUF21 domain-containing protein At1g55930, chloroplastic isoform X1 [... [more]
gi|659126017|ref|XP_008462970.1|4.6e-1297.50PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic iso... [more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa3G769670Csa3G769670gene
Csa3G769680Csa3G769680gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0085447G0085447EST