CU138470 (transcribed_cluster) Cucumber (Chinese Long) v2

Overview
NameCU138470
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 5819279 .. 5819477 (-)
Sequence length200
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

GAAGCATCTAAGTTTGCACAATCTATATTGATATCTGCTCAACTCTAGCTTGACATTGCAAAACTTGGATAGAATGTTCCAGTGGATGGTTTAGGACCGAACTCAAGAACACGAGCATTGCATAAGTACCTGATGATTCAAGAAAGCAGAATATTTCTGATTTTGGTGTATGGATATTCTCACATGTTTGAAGCGGGGTA
Library
Library categoryESTs
gynoecious flower library1
Homology
[Close]
BLAST of CU138470 vs. TrEMBL
Match: A0A0A0KD92_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087800 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.1e-12
Identity = 38/39 (97.44%), Postives = 38/39 (97.44%), Query Frame = 1 

Query: 82  VDGLGPNSRTRALHKYLMIQESRIFLILVYGYSHMFEAG 141
           VDGLGP SRTRALHKYLMIQESRIFLILVYGYSHMFEAG
Sbjct: 30  VDGLGPKSRTRALHKYLMIQESRIFLILVYGYSHMFEAG 68

Query: 142  199
           
Sbjct: 90   68

[Close]
BLAST of CU138470 vs. NCBI nr
Match: gi|700191148|gb|KGN46352.1| (hypothetical protein Csa_6G087800 [Cucumis sativus])

HSP 1 Score: 81.3 bits (199), Expect = 7.2e-13
Identity = 38/39 (97.44%), Postives = 38/39 (97.44%), Query Frame = 1 

Query: 82  VDGLGPNSRTRALHKYLMIQESRIFLILVYGYSHMFEAG 141
           VDGLGP SRTRALHKYLMIQESRIFLILVYGYSHMFEAG
Sbjct: 30  VDGLGPKSRTRALHKYLMIQESRIFLILVYGYSHMFEAG 68

Query: 142  199
           
Sbjct: 90   68

The following BLAST results are available for this feature:
BLAST of CU138470 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KD92_CUCSA1.1e-1297.44Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087800 PE=4 SV=1[more]
BLAST of CU138470 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700191148|gb|KGN46352.1|7.2e-1397.44hypothetical protein Csa_6G087800 [Cucumis sativus][more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G087800Csa6G087800gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0050492G0050492EST