CU133816 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU133816
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionNo hit
LocationChr3 : 15863034 .. 15879942 (-)
Sequence length110
The following sequences are available for this feature:

transcribed_cluster sequence

GTGAGGTGCCTTCGATTAAGGATGTGAACAATGAAGAACCTCTTTTTCCGGCTGTACCACTTCTTAATAGAAAGCTTGCATGTGATGAGCCAAAGTTGAGCTTACTATCT
Library categoryESTs
fruit (8DPP) library1
BLAST of CU133816 vs. NCBI nr
Match: gi|778680559|ref|XP_011651345.1| (PREDICTED: protein root UVB sensitive 1, chloroplastic [Cucumis sativus])

HSP 1 Score: 75.5 bits (184), Expect = 2.1e-11
Identity = 36/36 (100.00%), Postives = 36/36 (100.00%), Query Frame = 3

Query: 3   EVPSIKDVNNEEPLFPAVPLLNRKLACDEPKLSLLS 62
           EVPSIKDVNNEEPLFPAVPLLNRKLACDEPKLSLLS
Sbjct: 436 EVPSIKDVNNEEPLFPAVPLLNRKLACDEPKLSLLS 471

Query: 63  111
           
Sbjct: 496 471

BLAST of CU133816 vs. NCBI nr
Match: gi|659098056|ref|XP_008449956.1| (PREDICTED: UPF0420 protein C16orf58 homolog [Cucumis melo])

HSP 1 Score: 67.4 bits (163), Expect = 5.8e-09
Identity = 31/36 (86.11%), Postives = 33/36 (91.67%), Query Frame = 3

Query: 3   EVPSIKDVNNEEPLFPAVPLLNRKLACDEPKLSLLS 62
           EVPSIK+VNNEEPLFPAVPLLN +L CDEPKL LLS
Sbjct: 435 EVPSIKEVNNEEPLFPAVPLLNTRLGCDEPKLGLLS 470

Query: 63  111
           
Sbjct: 495 470

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|778680559|ref|XP_011651345.1|2.1e-11100.00PREDICTED: protein root UVB sensitive 1, chloroplastic [Cucumis sativus][more]
gi|659098056|ref|XP_008449956.1|5.8e-0986.11PREDICTED: UPF0420 protein C16orf58 homolog [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa3G254050Csa3G254050gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02OSJZQFKNP3UI02OSJZQEST