CU132858 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU132858
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 20631030 .. 20631410 (+)
Sequence length231
The following sequences are available for this feature:

transcribed_cluster sequence

AAGATGAAGAGGACAACAGCTGAATTTGCTAACAGAGTCTCTGAAATCTCTGTCATTTCTCCTCTCATTTGACTTCTTGGAACATTCATATCTTGAACAACTTTCTTCTTGGGAGAAGAGACTTGTTTCTTGGAGAAGGATTGAAGCTGTTGATCAAGCTCTTGAAGGGCCTGCCTAGCCTTATCTGGGTCAACCTCAAACTGTTGAGAATCCGACTCCCTTGCACACAAA
Library categoryESTs
fruit (8DPP) library1
BLAST of CU132858 vs. TrEMBL
Match: A0A0A0KH36_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G439950 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 3.4e-21
Identity = 58/76 (76.32%), Postives = 59/76 (77.63%), Query Frame = -2

Query: 3   LCARESDSQQFEVDPDKARQALQELDQQLXXXXXXXXXXXXXXXXXDMNVPRSQMRGEMT 62
           LCA+ESDSQQFEVDPDKARQALQELDQQL                 DMNVPRSQMRGEMT
Sbjct: 45  LCAKESDSQQFEVDPDKARQALQELDQQLQSFSKKQVSSPKKKVVQDMNVPRSQMRGEMT 104

Query: 63  EISETLLANSAVVLFI 122
           EISETLLANSAVVLFI
Sbjct: 105 EISETLLANSAVVLFI 120

Query: 123 182
           
Sbjct: 165 120

Query: 183 231
           
Sbjct: 225 120

BLAST of CU132858 vs. NCBI nr
Match: gi|778717033|ref|XP_011657640.1| (PREDICTED: uncharacterized protein LOC101220685 [Cucumis sativus])

HSP 1 Score: 105.5 bits (262), Expect = 4.1e-20
Identity = 58/76 (76.32%), Postives = 59/76 (77.63%), Query Frame = -2

Query: 3   LCARESDSQQFEVDPDKARQALQELDQQLXXXXXXXXXXXXXXXXXDMNVPRSQMRGEMT 62
           LCA+ESDSQQFEVDPDKARQALQELDQQL                 DMNVPRSQMRGEMT
Sbjct: 45  LCAKESDSQQFEVDPDKARQALQELDQQLQSFSKKQVSSPKKKVVQDMNVPRSQMRGEMT 104

Query: 63  EISETLLANSAVVLFI 122
           EISETLLANSAVVLFI
Sbjct: 105 EISETLLANSAVVLFI 120

Query: 123 182
           
Sbjct: 165 120

Query: 183 231
           
Sbjct: 225 120

BLAST of CU132858 vs. NCBI nr
Match: gi|659097587|ref|XP_008449706.1| (PREDICTED: uncharacterized protein LOC103491505 [Cucumis melo])

HSP 1 Score: 100.9 bits (250), Expect = 1.0e-18
Identity = 56/76 (73.68%), Postives = 57/76 (75.00%), Query Frame = -2

Query: 3   LCARESDSQQFEVDPDKARQALQELDQQLXXXXXXXXXXXXXXXXXDMNVPRSQMRGEMT 62
           LCARESDSQQFEVDPDKARQALQELDQQL                 DMN+PRSQMRGEMT
Sbjct: 45  LCARESDSQQFEVDPDKARQALQELDQQLQSFSKKQVSSPKKKVVQDMNLPRSQMRGEMT 104

Query: 63  EISETLLANSAVVLFI 122
           EI  TLLANSAVVLFI
Sbjct: 105 EIPGTLLANSAVVLFI 120

Query: 123 182
           
Sbjct: 165 120

Query: 183 231
           
Sbjct: 225 120

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KH36_CUCSA3.4e-2176.32Uncharacterized protein OS=Cucumis sativus GN=Csa_6G439950 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778717033|ref|XP_011657640.1|4.1e-2076.32PREDICTED: uncharacterized protein LOC101220685 [Cucumis sativus][more]
gi|659097587|ref|XP_008449706.1|1.0e-1873.68PREDICTED: uncharacterized protein LOC103491505 [Cucumis melo][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G439950Csa6G439950gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02OEMN6FKNP3UI02OEMN6EST


Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37716FAMILY NOT NAMEDcoord: 4..77
score: 5.3
NoneNo IPR availablePANTHERPTHR37716:SF1SUBFAMILY NOT NAMEDcoord: 4..77
score: 5.3