Csa6G439950 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCTGAAGCAACTTCATGTGGTAGTGGGTAATTAGCAGCTTCCAGATGCTTTCTCTTCAGTCTCTCTTCAATCAAAACCTGAGGCCGCCATTTGTAACCACCAAGAAATGCTCAGATGGTGTTTTGAAGATAAGGAAATTTCACCCACTTCATTATTCTGCTTCTCATTTTTCCATTTTGTGTGCAAAGGAGTCAGATTCTCAACAGTTTGAGGTTGACCCAGATAAGGCTAGGCAGGCCCTTCAAGAGCTTGATCAACAGCTTCAATCCTTCTCCAAGAAACAAGTCTCTTCTCCCAAGAAGAAAGGTAACTCCTCATCTTTTGAATCCGAAGTCTGAACTAAAATTTGTTGTTGTGTAACTTTGGTTGAAGACTGGACTGGACTTAGTATTATATAGAAGAAACCTCTATCACTACTTAGTATTGAGATTTTTGGTTTTGAAATTTTTTTGCAGTTGTTCAAGATATGAATGTTCCAAGAAGTCAAATGAGAGGAGAAATGACAGAGATTTCAGAGACTCTGTTAGCAAATTCAGCTGTTGTCCTCTTCATCTTCTCCATTTTCTACAATGTGCTGTTCTATACTGTCATAAAGCCTTCCATTGATGTTCCATTACCAAGTTCTATCAGTTCTGACTTTGAGAAAGAATCTACTCAGCCATCAGTTTTGCAGCAGCTTCCACTTTCATCTATGTCCATATCCCCCTCACTTCTTAGTTAAAATATTTAATTATGATTACAGAACTTCGACCATAGCTATCTAAATTGTATACATCAAGAAAAAGTGATCAAGATTATGTTGTTTACAGAGTATTATATTGATGGTATGCCAAAGAAAG ATGCTTTCTCTTCAGTCTCTCTTCAATCAAAACCTGAGGCCGCCATTTGTAACCACCAAGAAATGCTCAGATGGTGTTTTGAAGATAAGGAAATTTCACCCACTTCATTATTCTGCTTCTCATTTTTCCATTTTGTGTGCAAAGGAGTCAGATTCTCAACAGTTTGAGGTTGACCCAGATAAGGCTAGGCAGGCCCTTCAAGAGCTTGATCAACAGCTTCAATCCTTCTCCAAGAAACAAGTCTCTTCTCCCAAGAAGAAAGTTGTTCAAGATATGAATGTTCCAAGAAGTCAAATGAGAGGAGAAATGACAGAGATTTCAGAGACTCTGTTAGCAAATTCAGCTGTTGTCCTCTTCATCTTCTCCATTTTCTACAATGTGCTGTTCTATACTGTCATAAAGCCTTCCATTGATGTTCCATTACCAAGTTCTATCAGTTCTGACTTTGAGAAAGAATCTACTCAGCCATCAGTTTTGCAGCAGCTTCCACTTTCATCTATGTCCATATCCCCCTCACTTCTTAGTTAA ATGCTTTCTCTTCAGTCTCTCTTCAATCAAAACCTGAGGCCGCCATTTGTAACCACCAAGAAATGCTCAGATGGTGTTTTGAAGATAAGGAAATTTCACCCACTTCATTATTCTGCTTCTCATTTTTCCATTTTGTGTGCAAAGGAGTCAGATTCTCAACAGTTTGAGGTTGACCCAGATAAGGCTAGGCAGGCCCTTCAAGAGCTTGATCAACAGCTTCAATCCTTCTCCAAGAAACAAGTCTCTTCTCCCAAGAAGAAAGTTGTTCAAGATATGAATGTTCCAAGAAGTCAAATGAGAGGAGAAATGACAGAGATTTCAGAGACTCTGTTAGCAAATTCAGCTGTTGTCCTCTTCATCTTCTCCATTTTCTACAATGTGCTGTTCTATACTGTCATAAAGCCTTCCATTGATGTTCCATTACCAAGTTCTATCAGTTCTGACTTTGAGAAAGAATCTACTCAGCCATCAGTTTTGCAGCAGCTTCCACTTTCATCTATGTCCATATCCCCCTCACTTCTTAGTTAA MLSLQSLFNQNLRPPFVTTKKCSDGVLKIRKFHPLHYSASHFSILCAKESDSQQFEVDPDKARQALQELDQQLQSFSKKQVSSPKKKVVQDMNVPRSQMRGEMTEISETLLANSAVVLFIFSIFYNVLFYTVIKPSIDVPLPSSISSDFEKESTQPSVLQQLPLSSMSISPSLLS*
BLAST of Csa6G439950 vs. TrEMBL
Match: A0A0A0KH36_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G439950 PE=4 SV=1) HSP 1 Score: 340.1 bits (871), Expect = 1.6e-90 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 1
BLAST of Csa6G439950 vs. TrEMBL
Match: B9GEZ9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s26450g PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 1.9e-22 Identity = 58/131 (44.27%), Postives = 92/131 (70.23%), Query Frame = 1
BLAST of Csa6G439950 vs. TrEMBL
Match: B9RIC8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1577830 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 3.2e-22 Identity = 66/131 (50.38%), Postives = 90/131 (68.70%), Query Frame = 1
BLAST of Csa6G439950 vs. TrEMBL
Match: D7SL34_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g02290 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 7.0e-22 Identity = 60/101 (59.41%), Postives = 75/101 (74.26%), Query Frame = 1
BLAST of Csa6G439950 vs. TrEMBL
Match: M5WL13_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026884mg PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 7.8e-21 Identity = 72/156 (46.15%), Postives = 93/156 (59.62%), Query Frame = 1
BLAST of Csa6G439950 vs. TAIR10
Match: AT2G01870.1 (AT2G01870.1 unknown protein) HSP 1 Score: 71.2 bits (173), Expect = 7.0e-13 Identity = 46/116 (39.66%), Postives = 69/116 (59.48%), Query Frame = 1
BLAST of Csa6G439950 vs. NCBI nr
Match: gi|778717033|ref|XP_011657640.1| (PREDICTED: uncharacterized protein LOC101220685 [Cucumis sativus]) HSP 1 Score: 340.1 bits (871), Expect = 2.3e-90 Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 1
BLAST of Csa6G439950 vs. NCBI nr
Match: gi|659097587|ref|XP_008449706.1| (PREDICTED: uncharacterized protein LOC103491505 [Cucumis melo]) HSP 1 Score: 321.2 bits (822), Expect = 1.1e-84 Identity = 164/175 (93.71%), Postives = 168/175 (96.00%), Query Frame = 1
BLAST of Csa6G439950 vs. NCBI nr
Match: gi|743924153|ref|XP_011006193.1| (PREDICTED: uncharacterized protein LOC105112258 [Populus euphratica]) HSP 1 Score: 115.5 bits (288), Expect = 9.1e-23 Identity = 59/131 (45.04%), Postives = 91/131 (69.47%), Query Frame = 1
BLAST of Csa6G439950 vs. NCBI nr
Match: gi|743904129|ref|XP_011045427.1| (PREDICTED: uncharacterized protein LOC105140332 [Populus euphratica]) HSP 1 Score: 115.5 bits (288), Expect = 9.1e-23 Identity = 59/131 (45.04%), Postives = 91/131 (69.47%), Query Frame = 1
BLAST of Csa6G439950 vs. NCBI nr
Match: gi|566151116|ref|XP_002299905.2| (hypothetical protein POPTR_0001s26450g [Populus trichocarpa]) HSP 1 Score: 114.0 bits (284), Expect = 2.7e-22 Identity = 58/131 (44.27%), Postives = 92/131 (70.23%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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