CU131792 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU131792
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionChlororespiratory reduction 42
LocationChr4 : 10797175 .. 10797409 (-)
Sequence length243
The following sequences are available for this feature:

transcribed_cluster sequence

CGGCCGGGGACGATTCCAATGGCTGCTTATCTTCCTCCTACAACACCATTCTCGCGCCCCAACATTAGAATCCTCACTTCCATCTCTTCCTTCAACGTTTCCAACACTCTGACCACTCGTTCACAACCGCGAAGCATCGTGAAATGCGAATCCAGTGCATCGCCAGCAGACGGCCAGACGCCGCCGCCAAAAAGTCAGAAACTCGAGATCGGGTCCCCCGTTATCGTAATCGAGGCTCCCAAG
Library categoryESTs
fruit (8DPP) library1
BLAST of CU131792 vs. TrEMBL
Match: A0A0A0L1Q6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G279890 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 7.0e-33
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1

Query: 19  MAAYLPPTTPFSRPNIRILTSISSFNVSNTLTTRSQPRSIVKCESSASPADGQTPPPKSQ 78
           MAAYLPPTTPFSRPNIRILTSISSFNVSNTLTTRSQPRSIVKCESSASPADGQT PPKSQ
Sbjct: 1   MAAYLPPTTPFSRPNIRILTSISSFNVSNTLTTRSQPRSIVKCESSASPADGQTSPPKSQ 60

Query: 79  KLEIGSPVIVIEAPK 138
           KLEIGSPVIVIEAPK
Sbjct: 61  KLEIGSPVIVIEAPK 75

Query: 139 198
           
Sbjct: 121 75

Query: 199 244
           
Sbjct: 181 75

BLAST of CU131792 vs. NCBI nr
Match: gi|449448996|ref|XP_004142251.1| (PREDICTED: uncharacterized protein LOC101219406 [Cucumis sativus])

HSP 1 Score: 141.4 bits (355), Expect = 7.2e-31
Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1

Query: 19  MAAYLPPTTPFSRPNIRILTSISSFNVSNTLTTRSQPRSIVKCESSASPADGQTPPPKSQ 78
           MAAYLPPTTPFSRPNIRILTSISSFNVSNTLTTRSQPRSIVKCESSASPADGQT PPKSQ
Sbjct: 1   MAAYLPPTTPFSRPNIRILTSISSFNVSNTLTTRSQPRSIVKCESSASPADGQTSPPKSQ 60

Query: 79  KLEIGSPVIVIEAPK 138
           KLEIGSPVIVIEAPK
Sbjct: 61  KLEIGSPVIVIEAPK 75

Query: 139 198
           
Sbjct: 121 75

Query: 199 244
           
Sbjct: 181 75

BLAST of CU131792 vs. NCBI nr
Match: gi|659097820|ref|XP_008449832.1| (PREDICTED: uncharacterized protein LOC103491596 [Cucumis melo])

HSP 1 Score: 120.6 bits (301), Expect = 1.3e-24
Identity = 65/75 (86.67%), Postives = 67/75 (89.33%), Query Frame = 1

Query: 19  MAAYLPPTTPFSRPNIRILTSISSFNVSNTLTTRSQPRSIVKCESSASPADGQTPPPKSQ 78
           MAA   PTTP SRP+IR LTSISSFNVSN L+TRSQPRSIVKCESSAS ADGQTPP KSQ
Sbjct: 1   MAASFSPTTPISRPSIRTLTSISSFNVSNNLSTRSQPRSIVKCESSASAADGQTPPAKSQ 60

Query: 79  KLEIGSPVIVIEAPK 138
           KLEIGSPVIVIEAPK
Sbjct: 61  KLEIGSPVIVIEAPK 75

Query: 139 198
           
Sbjct: 121 75

Query: 199 244
           
Sbjct: 181 75

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L1Q6_CUCSA7.0e-3398.67Uncharacterized protein OS=Cucumis sativus GN=Csa_4G279890 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449448996|ref|XP_004142251.1|7.2e-3198.67PREDICTED: uncharacterized protein LOC101219406 [Cucumis sativus][more]
gi|659097820|ref|XP_008449832.1|1.3e-2486.67PREDICTED: uncharacterized protein LOC103491596 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G279890Csa4G279890gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02NV4PQFKNP3UI02NV4PQEST