CU130764 (transcribed_cluster) Cucumber (Chinese Long) v2

Overview
NameCU130764
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 3717311 .. 3718558 (-)
Sequence length250
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

TGACGATGGGATGGGACCCGACCAATTATCGGAAACCAAATCAATTTTGATTTATTTTTTTGCATTGCTGTCGAGGATTCGAATTCTCTTACTTGCACGTTTTCTTGCGATGATATTCTCTGGTACTCACTCATCGGAGGATAAAGTTCGCTTCCGTTAAGCCATGTGAACTCCTTATCAGAAGCACATAAGGAAGGCAAGCTACGCATTGAAAGCTTGGAGAAGGAATTGACAAACTGCACCGAGGAAA
Library
Library categoryESTs
fruit (8DPP) library1
Homology
[Close]
BLAST of CU130764 vs. TrEMBL
Match: A0A0A0LVL0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G039030 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 9.7e-14
Identity = 44/60 (73.33%), Postives = 45/60 (75.00%), Query Frame = 1 

Query: 70  VEDSNSLTCTFSCDDILWYXXXXXXXXXXXXHVNSLSEAHKEGKLRIESLEKELTNCTEE 129
           + DSNSLTCTFSCDDIL              HVNSLSEAHKEGKLRIESLEKELTNCTEE
Sbjct: 126 IMDSNSLTCTFSCDDIL-------------CHVNSLSEAHKEGKLRIESLEKELTNCTEE 172

Query: 130  189
           
Sbjct: 186  172

Query: 190  249
           
Sbjct: 246  172

[Close]
BLAST of CU130764 vs. NCBI nr
Match: gi|700208940|gb|KGN64036.1| (hypothetical protein Csa_1G039030 [Cucumis sativus])

HSP 1 Score: 82.8 bits (203), Expect = 3.1e-13
Identity = 44/60 (73.33%), Postives = 45/60 (75.00%), Query Frame = 1 

Query: 70  VEDSNSLTCTFSCDDILWYXXXXXXXXXXXXHVNSLSEAHKEGKLRIESLEKELTNCTEE 129
           + DSNSLTCTFSCDDIL              HVNSLSEAHKEGKLRIESLEKELTNCTEE
Sbjct: 126 IMDSNSLTCTFSCDDIL-------------CHVNSLSEAHKEGKLRIESLEKELTNCTEE 172

Query: 130  189
           
Sbjct: 186  172

Query: 190  249
           
Sbjct: 246  172

The following BLAST results are available for this feature:
BLAST of CU130764 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVL0_CUCSA9.7e-1473.33Uncharacterized protein OS=Cucumis sativus GN=Csa_1G039030 PE=4 SV=1[more]
BLAST of CU130764 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700208940|gb|KGN64036.1|3.1e-1373.33hypothetical protein Csa_1G039030 [Cucumis sativus][more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G039030Csa1G039030gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02NGHFPFKNP3UI02NGHFPEST