CU128966 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU128966
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 4831034 .. 4831411 (-)
Sequence length247
The following sequences are available for this feature:

transcribed_cluster sequence

CGGCCGGGGGAAAAAGGCTTCTGCGCAAGAAAGAAACACTCGTTTTTCTCCCTCCCGCCATTGCTCGAAGCTTCCTGTCTACTTTGTCTGTATTTTACGCACAAAGGCAATGGCTACTGAAGAAGACTCCGTGGAACAAGTTGCTGCAGCACGTAAAGAGAGATTGAAAGCTCTAAGAGCTGCTCAGGAATTGTTAAACAATTCAGATGAGAAGAATTCTGGAGGAGAGGATAAAGAGAATGGAGCT
Library categoryESTs
fruit (8DPP) library1
BLAST of CU128966 vs. TrEMBL
Match: A0A0A0LR08_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043260 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.9e-10
Identity = 39/59 (66.10%), Postives = 41/59 (69.49%), Query Frame = 2

Query: 71  LPVYFVCILRTKAMATEEDSVEQVXXXXXXXXXXXXXXQELLNNSDEKNSGGEDKENGA 130
           L ++   ILRTKAMATEEDSVEQV              QELLNNSDEKNSGGEDKENGA
Sbjct: 29  LVIFVSGILRTKAMATEEDSVEQVAAARKERLKALRAAQELLNNSDEKNSGGEDKENGA 87

Query: 131 190
           
Sbjct: 89  87

Query: 191 248
           
Sbjct: 149 87

BLAST of CU128966 vs. TrEMBL
Match: A0A0A0LR08_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043260 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.5e-06
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 1

Query: 10 EKGFCARKKHSFFSLPPLLEASCLLCL 69
          +KGFCARKKHSFFSLPPLLEASCLLCL
Sbjct: 3  QKGFCARKKHSFFSLPPLLEASCLLCL 29

Query: 70 91
          
Sbjct: 63 29

BLAST of CU128966 vs. NCBI nr
Match: gi|700209127|gb|KGN64223.1| (hypothetical protein Csa_1G043260 [Cucumis sativus])

HSP 1 Score: 69.7 bits (169), Expect = 2.7e-09
Identity = 39/59 (66.10%), Postives = 41/59 (69.49%), Query Frame = 2

Query: 71  LPVYFVCILRTKAMATEEDSVEQVXXXXXXXXXXXXXXQELLNNSDEKNSGGEDKENGA 130
           L ++   ILRTKAMATEEDSVEQV              QELLNNSDEKNSGGEDKENGA
Sbjct: 29  LVIFVSGILRTKAMATEEDSVEQVAAARKERLKALRAAQELLNNSDEKNSGGEDKENGA 87

Query: 131 190
           
Sbjct: 89  87

Query: 191 248
           
Sbjct: 149 87

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LR08_CUCSA2.9e-1066.10Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043260 PE=4 SV=1[more]
A0A0A0LR08_CUCSA1.5e-0696.30Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043260 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700209127|gb|KGN64223.1|2.7e-0966.10hypothetical protein Csa_1G043260 [Cucumis sativus][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G043260Csa1G043260gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02MQVNHFKNP3UI02MQVNHEST


Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 11..31
scor