CU124653 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU124653
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 28348036 .. 28348294 (+)
Sequence length269
The following sequences are available for this feature:

transcribed_cluster sequence

CGGCCGGGAACAGGAACAGATGTACAATTTTGGTAATTAATAGGTGATCAAGACAAGCTTAAGAAGTGGGCAGAGGCGTTTGATTGTGAGGTGGGTTCTCTCCCTTCTTCTTACCTTGGGCTTTTGTGGGTCCTAACTTGAGAGCTACGACATTTTGGAATCCAATTTGTGAGAAGATTCAAAAGAAGCTGGCAGTGTGGTGTAAGGGTTTTTCTCTAAAGCCGGCAGATAAACCTTGATTAGATCTGTGTTGAGTGGCTTTTTCACGG
Library categoryESTs
fruit (8DPP) library1
BLAST of CU124653 vs. TrEMBL
Match: A0A0A0LYJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G701340 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 5.3e-10
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 1

Query: 43  GDQDKLKKWAEAFDCEVGSLPSSYLGLLWVLT 102
           GDQDKLKKWAEAFDCEVGSLPSSYLGLLWVLT
Sbjct: 68  GDQDKLKKWAEAFDCEVGSLPSSYLGLLWVLT 99

Query: 103 139
           
Sbjct: 128 99

BLAST of CU124653 vs. NCBI nr
Match: gi|700211762|gb|KGN66858.1| (hypothetical protein Csa_1G701340 [Cucumis sativus])

HSP 1 Score: 74.3 bits (181), Expect = 1.2e-10
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 1

Query: 43  GDQDKLKKWAEAFDCEVGSLPSSYLGLLWVLT 102
           GDQDKLKKWAEAFDCEVGSLPSSYLGLLWVLT
Sbjct: 68  GDQDKLKKWAEAFDCEVGSLPSSYLGLLWVLT 99

Query: 103 139
           
Sbjct: 128 99

BLAST of CU124653 vs. NCBI nr
Match: gi|700206250|gb|KGN61369.1| (hypothetical protein Csa_2G100020 [Cucumis sativus])

HSP 1 Score: 60.1 bits (144), Expect = 2.3e-06
Identity = 35/77 (45.45%), Postives = 43/77 (55.84%), Query Frame = 3

Query: 9   NRNRCTILVIN----R*SRQA*EVGRGV*L*GGFSPFFLPWAFVGPNLRATTFWNPICEK 68
           NRN+CTI  IN    +  R A      V     F   +L     G N RA +FWNPICEK
Sbjct: 14  NRNKCTIYDINSDQVKLQRWAEAFDCEV---DSFPSCYLGLLLRG-NSRAVSFWNPICEK 73

Query: 69  IQKKLAVWCKGFSLKPA 128
           I+K+LA+W KGF  KP+
Sbjct: 74  IKKRLAMWKKGFLSKPS 86

Query: 129 188
           
Sbjct: 134 86

Query: 189 228
           
Sbjct: 194 86

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LYJ9_CUCSA5.3e-10100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G701340 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700211762|gb|KGN66858.1|1.2e-10100.00hypothetical protein Csa_1G701340 [Cucumis sativus][more]
gi|700206250|gb|KGN61369.1|2.3e-0645.45hypothetical protein Csa_2G100020 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G701340Csa1G701340gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02L1YDLFKNP3UI02L1YDLEST