CU124619 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU124619
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionBnaC05g38120D protein
LocationChr3 : 35324958 .. 35325217 (-)
Sequence length267
The following sequences are available for this feature:

transcribed_cluster sequence

CGGCCGGGGGGATGGTAAGAGGTGGCCGCAATCTGATGGCGCTGCCCGGAGATAGGTGCCGCCGGAATCAGGGAAGCAGAGAGGTTCTAAGAAGGGCTTTGATGCCGCCGAGCCGGAGACCCACACTCCGATGGATGAATTTCCGGCCAACTCCCAGTCGTCTTTCCATAATGTCTATGGCCGAAAGTTAATTGATTAATTTTGTTTTTTGGGATTATTCTTTGATTCTTATTCAACAAATTTCTGGGACTTTCTTTGTATGTATGG
Library categoryESTs
fruit (8DPP) library1
BLAST of CU124619 vs. TrEMBL
Match: A0A0A0LD23_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G852440 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 6.2e-27
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 3

Query: 6   GGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMAE 65
           GGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMAE
Sbjct: 38  GGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMAE 97

Query: 66  S 125
           S
Sbjct: 98  S 98

Query: 126 185
           
Sbjct: 158 98

Query: 186 189
           
Sbjct: 218 98

BLAST of CU124619 vs. TrEMBL
Match: B9N1L2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s41500g PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 3.7e-11
Identity = 36/58 (62.07%), Postives = 44/58 (75.86%), Query Frame = 3

Query: 9   GMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMA 68
           G VR  ++   +P D+ RRNQ + E+LRRAL PP+RR TLRW NF+PTPSRLS MSMA
Sbjct: 51  GSVRCSKHGYLVPSDKLRRNQANTEILRRALAPPNRRLTLRWFNFQPTPSRLSNMSMA 108

Query: 69  128
           
Sbjct: 111 108

Query: 129 183
           
Sbjct: 171 108

BLAST of CU124619 vs. TrEMBL
Match: A0A072VBI5_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_2g080030 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.8e-10
Identity = 34/58 (58.62%), Postives = 44/58 (75.86%), Query Frame = 3

Query: 9   GMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMA 68
           G VR  R+   +PG+R ++   S+E+LRRAL PP +R  LRW+NF+PTPSRLSIMSMA
Sbjct: 52  GSVRCARHGYVVPGERLKKRLASKEILRRALTPPPKRLGLRWLNFKPTPSRLSIMSMA 109

Query: 69  128
           
Sbjct: 112 109

Query: 129 183
           
Sbjct: 172 109

BLAST of CU124619 vs. TrEMBL
Match: B9HZY7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s12430g PE=4 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 1.8e-10
Identity = 37/59 (62.71%), Postives = 46/59 (77.97%), Query Frame = 3

Query: 9   GMVRGGRNLMALPGDRC-RRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMA 68
           G VR  ++   +PGD+  RR+Q ++E+LRRAL PP+RR TLRW NFRPTPSRLS MSMA
Sbjct: 51  GSVRCSKHGYMVPGDKLIRRHQANKELLRRALAPPNRRLTLRWFNFRPTPSRLSNMSMA 109

Query: 69  128
           
Sbjct: 111 109

Query: 129 183
           
Sbjct: 171 109

BLAST of CU124619 vs. TrEMBL
Match: B9T365_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0129360 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 2.4e-10
Identity = 37/59 (62.71%), Postives = 45/59 (76.27%), Query Frame = 3

Query: 9   GMVRGGRNLMALPGDRCRRN-QGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMA 68
           G VR  ++   LP D+ RR+ Q SRE+LRRAL PP+R+ +LRW NFRPTPSRLS MSMA
Sbjct: 59  GSVRCSKHGYVLPSDKLRRHHQASREILRRALAPPNRKMSLRWWNFRPTPSRLSNMSMA 117

Query: 69  128
           
Sbjct: 119 117

Query: 129 183
           
Sbjct: 179 117

BLAST of CU124619 vs. NCBI nr
Match: gi|778688989|ref|XP_011652880.1| (PREDICTED: uncharacterized protein LOC105435142 [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 5.8e-26
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 3

Query: 6   GGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMAE 65
           GGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMAE
Sbjct: 38  GGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMAE 97

Query: 66  S 125
           S
Sbjct: 98  S 98

Query: 126 185
           
Sbjct: 158 98

Query: 186 189
           
Sbjct: 218 98

BLAST of CU124619 vs. NCBI nr
Match: gi|659109339|ref|XP_008454664.1| (PREDICTED: uncharacterized protein LOC103495017 [Cucumis melo])

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-25
Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 3

Query: 6   GGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMAE 65
           GGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLS+MSMAE
Sbjct: 38  GGMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSMMSMAE 97

Query: 66  S 125
           S
Sbjct: 98  S 98

Query: 126 185
           
Sbjct: 158 98

Query: 186 189
           
Sbjct: 218 98

BLAST of CU124619 vs. NCBI nr
Match: gi|566154106|ref|XP_006370308.1| (hypothetical protein POPTR_0001s41500g [Populus trichocarpa])

HSP 1 Score: 72.8 bits (177), Expect = 3.4e-10
Identity = 36/58 (62.07%), Postives = 44/58 (75.86%), Query Frame = 3

Query: 9   GMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMA 68
           G VR  ++   +P D+ RRNQ + E+LRRAL PP+RR TLRW NF+PTPSRLS MSMA
Sbjct: 51  GSVRCSKHGYLVPSDKLRRNQANTEILRRALAPPNRRLTLRWFNFQPTPSRLSNMSMA 108

Query: 69  128
           
Sbjct: 111 108

Query: 129 183
           
Sbjct: 171 108

BLAST of CU124619 vs. NCBI nr
Match: gi|566195099|ref|XP_002316920.2| (hypothetical protein POPTR_0011s12430g [Populus trichocarpa])

HSP 1 Score: 70.5 bits (171), Expect = 1.7e-09
Identity = 37/59 (62.71%), Postives = 46/59 (77.97%), Query Frame = 3

Query: 9   GMVRGGRNLMALPGDRC-RRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMA 68
           G VR  ++   +PGD+  RR+Q ++E+LRRAL PP+RR TLRW NFRPTPSRLS MSMA
Sbjct: 51  GSVRCSKHGYMVPGDKLIRRHQANKELLRRALAPPNRRLTLRWFNFRPTPSRLSNMSMA 109

Query: 69  128
           
Sbjct: 111 109

Query: 129 183
           
Sbjct: 171 109

BLAST of CU124619 vs. NCBI nr
Match: gi|922392698|ref|XP_013464758.1| (hypothetical protein MTR_2g080030 [Medicago truncatula])

HSP 1 Score: 70.5 bits (171), Expect = 1.7e-09
Identity = 34/58 (58.62%), Postives = 44/58 (75.86%), Query Frame = 3

Query: 9   GMVRGGRNLMALPGDRCRRNQGSREVLRRALMPPSRRPTLRWMNFRPTPSRLSIMSMA 68
           G VR  R+   +PG+R ++   S+E+LRRAL PP +R  LRW+NF+PTPSRLSIMSMA
Sbjct: 52  GSVRCARHGYVVPGERLKKRLASKEILRRALTPPPKRLGLRWLNFKPTPSRLSIMSMA 109

Query: 69  128
           
Sbjct: 112 109

Query: 129 183
           
Sbjct: 172 109

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LD23_CUCSA6.2e-27100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G852440 PE=4 SV=1[more]
B9N1L2_POPTR3.7e-1162.07Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s41500g PE=4 SV=1[more]
A0A072VBI5_MEDTR1.8e-1058.62Uncharacterized protein OS=Medicago truncatula GN=MTR_2g080030 PE=4 SV=1[more]
B9HZY7_POPTR1.8e-1062.71Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s12430g PE=4 SV=2[more]
B9T365_RICCO2.4e-1062.71Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0129360 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778688989|ref|XP_011652880.1|5.8e-26100.00PREDICTED: uncharacterized protein LOC105435142 [Cucumis sativus][more]
gi|659109339|ref|XP_008454664.1|1.3e-2598.36PREDICTED: uncharacterized protein LOC103495017 [Cucumis melo][more]
gi|566154106|ref|XP_006370308.1|3.4e-1062.07hypothetical protein POPTR_0001s41500g [Populus trichocarpa][more]
gi|566195099|ref|XP_002316920.2|1.7e-0962.71hypothetical protein POPTR_0011s12430g [Populus trichocarpa][more]
gi|922392698|ref|XP_013464758.1|1.7e-0958.62hypothetical protein MTR_2g080030 [Medicago truncatula][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa3G852440Csa3G852440gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02L1CVYFKNP3UI02L1CVYEST