CU123141 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU123141
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 7193225 .. 7195624 (-)
Sequence length235
The following sequences are available for this feature:

transcribed_cluster sequence

ATCTCTTCACTTGGACGGCAGAATGGACGATAACTCTTAATTAGGAAATCAAAGTATCCCCTTGCATCAGGATCTGATATAGGTGTATACCATGTATAGATGCACAACGCAACATTTAACCCTCAGTAGGATCGAATGAAAATCTAAAAGACCGCCATTGACAACAAAGGTAGGAGATGGCCGGCGATTTGGAGAGTGAGAGGGCAGTGGCTGAGAGAGGGCACGATGATGGCGG
Library categoryESTs
fruit (8DPP) library1
BLAST of CU123141 vs. TrEMBL
Match: A0A0A0KVX9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G112620 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.3e-07
Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = -1

Query: 152 PPSSCPLSATALSLSKSPAISYLCCQWR 211
           PPSSCPLSATALSLSKSPAISYLCCQWR
Sbjct: 60  PPSSCPLSATALSLSKSPAISYLCCQWR 87

Query: 212 236
           
Sbjct: 120 87

BLAST of CU123141 vs. TrEMBL
Match: A0A0A0KVX9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G112620 PE=4 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.2e-02
Identity = 20/27 (74.07%), Postives = 23/27 (85.19%), Query Frame = -3

Query: 27  LCIYTWYTPISDPDARGYFDFLIKSYR 86
           LC    YTPISDPDARGYFDFLIK+++
Sbjct: 82  LCCQWRYTPISDPDARGYFDFLIKNFQ 108

Query: 87  108
           
Sbjct: 142 108

BLAST of CU123141 vs. NCBI nr
Match: gi|700198570|gb|KGN53728.1| (hypothetical protein Csa_4G112620 [Cucumis sativus])

HSP 1 Score: 60.1 bits (144), Expect = 2.0e-06
Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = -1

Query: 152 PPSSCPLSATALSLSKSPAISYLCCQWR 211
           PPSSCPLSATALSLSKSPAISYLCCQWR
Sbjct: 60  PPSSCPLSATALSLSKSPAISYLCCQWR 87

Query: 212 236
           
Sbjct: 120 87

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KVX9_CUCSA1.3e-07100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G112620 PE=4 SV=1[more]
A0A0A0KVX9_CUCSA1.2e-0274.07Uncharacterized protein OS=Cucumis sativus GN=Csa_4G112620 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700198570|gb|KGN53728.1|2.0e-06100.00hypothetical protein Csa_4G112620 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G112620Csa4G112620gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02K8JFBFKNP3UI02K8JFBEST