CU121343 (transcribed_cluster) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CU121343
Type	transcribed_cluster
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Unknown protein
Location	Chr1 : 20323787 .. 20325009 (-)
Sequence length	285

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

AGAGAGGAACATGAACAAATAGTGTATTTTGTATTCCGTTCTCTCTGCTTGGCGGAGGGAATGGTAGTAGACATAATTGCACACGAACCGACCAGCATCATCTGAAGTCATCACTTCGTATCCCTTCTTTGCCAGTGTCTTCGTTATTTCCTCCACTGGAAGAGAGGTCTCTCGTGCACGTGATACTTCACCGTCCTCCAGTACAATTGGTACTTTCTGAGGCTTCCATCCCATTTCATCAGGACATACGAAAAGTAGGCTTCATTAAAAGGACTTGGCGTTCGA

Library


Library category	ESTs
fruit (8DPP) library	1
hermaphrodite flower library	1

Homology

[Close]

BLAST of CU121343 vs. TrEMBL
Match: A0A0A0LVQ6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560640 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 2.4e-32
Identity = 70/75 (93.33%), Postives = 70/75 (93.33%), Query Frame = -1


Query: 28  FVCPDEMGWKPQKVPIVLEDGEVSRARETSLPVEEITKTLAKKGYEVMTSDDAGRFVCNY 87
           F CPDEMGWKPQKVPIVLEDGEVSRARETSLPVEEITKTLAKKGYEVMTSDDAGRFVCNY
Sbjct: 113 FRCPDEMGWKPQKVPIVLEDGEVSRARETSLPVEEITKTLAKKGYEVMTSDDAGRFVCNY 172

Query: 88  VYYHSLRQAERTEYK 147
           VYYHSLRQAE    K
Sbjct: 173 VYYHSLRQAEENGIK 187

Query: 148  207
           
Sbjct: 233  187

Query: 208  253
           
Sbjct: 293  187

[Close]

BLAST of CU121343 vs. TrEMBL
Match: A0A067DMF7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024368mg PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.0e-27
Identity = 61/75 (81.33%), Postives = 66/75 (88.00%), Query Frame = -1


Query: 28  FVCPDEMGWKPQKVPIVLEDGEVSRARETSLPVEEITKTLAKKGYEVMTSDDAGRFVCNY 87
           F CPDEMGWKPQKVPI   DGE+SR RETS+PVEEIT+TLAKKGYEV+TSDDAGRFVCNY
Sbjct: 147 FRCPDEMGWKPQKVPIFPADGEISRVRETSIPVEEITRTLAKKGYEVITSDDAGRFVCNY 206

Query: 88  VYYHSLRQAERTEYK 147
           VYYHSLR AE+   K
Sbjct: 207 VYYHSLRFAEQNGTK 221

Query: 148  207
           
Sbjct: 267  221

Query: 208  253
           
Sbjct: 327  221

[Close]

BLAST of CU121343 vs. TrEMBL
Match: A0A067DLB0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024368mg PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.0e-27
Identity = 61/75 (81.33%), Postives = 66/75 (88.00%), Query Frame = -1


Query: 28  FVCPDEMGWKPQKVPIVLEDGEVSRARETSLPVEEITKTLAKKGYEVMTSDDAGRFVCNY 87
           F CPDEMGWKPQKVPI   DGE+SR RETS+PVEEIT+TLAKKGYEV+TSDDAGRFVCNY
Sbjct: 147 FRCPDEMGWKPQKVPIFPADGEISRVRETSIPVEEITRTLAKKGYEVITSDDAGRFVCNY 206

Query: 88  VYYHSLRQAERTEYK 147
           VYYHSLR AE+   K
Sbjct: 207 VYYHSLRFAEQNGTK 221

Query: 148  207
           
Sbjct: 267  221

Query: 208  253
           
Sbjct: 327  221

[Close]

BLAST of CU121343 vs. TrEMBL
Match: A9PBR6_POPTR (Pyrrolidone-carboxylate peptidase family protein OS=Populus trichocarpa GN=POPTR_0013s00650g PE=2 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.0e-27
Identity = 61/75 (81.33%), Postives = 66/75 (88.00%), Query Frame = -1


Query: 28  FVCPDEMGWKPQKVPIVLEDGEVSRARETSLPVEEITKTLAKKGYEVMTSDDAGRFVCNY 87
           F CPDEMGWKPQKVPI+  DG +SR RET+LPVEEITK+LAKKGYEVMTSDDAGRFVCNY
Sbjct: 113 FRCPDEMGWKPQKVPIIPSDGGISRVRETTLPVEEITKSLAKKGYEVMTSDDAGRFVCNY 172

Query: 88  VYYHSLRQAERTEYK 147
           VYYHSLR AE+   K
Sbjct: 173 VYYHSLRFAEQNGTK 187

Query: 148  207
           
Sbjct: 233  187

Query: 208  253
           
Sbjct: 293  187

[Close]

BLAST of CU121343 vs. TrEMBL
Match: A0A068V407_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00042842001 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.0e-27
Identity = 62/75 (82.67%), Postives = 65/75 (86.67%), Query Frame = -1


Query: 28  FVCPDEMGWKPQKVPIVLEDGEVSRARETSLPVEEITKTLAKKGYEVMTSDDAGRFVCNY 87
           F CPDEMGWKPQKVPI+  DG +SRARETSLPVEEITK LAK GYEVMTSDDAGRFVCNY
Sbjct: 113 FRCPDEMGWKPQKVPIIPADGGISRARETSLPVEEITKALAKMGYEVMTSDDAGRFVCNY 172

Query: 88  VYYHSLRQAERTEYK 147
           VYYHSLR AE+   K
Sbjct: 173 VYYHSLRFAEQNGIK 187

Query: 148  207
           
Sbjct: 233  187

Query: 208  253
           
Sbjct: 293  187

[Close]

BLAST of CU121343 vs. NCBI nr
Match: gi|778662142|ref|XP_011659412.1| (PREDICTED: pyroglutamyl-peptidase 1 [Cucumis sativus])

HSP 1 Score: 146.7 bits (369), Expect = 2.0e-32
Identity = 70/75 (93.33%), Postives = 70/75 (93.33%), Query Frame = -1


Query: 28  FVCPDEMGWKPQKVPIVLEDGEVSRARETSLPVEEITKTLAKKGYEVMTSDDAGRFVCNY 87
           F CPDEMGWKPQKVPIVLEDGEVSRARETSLPVEEITKTLAKKGYEVMTSDDAGRFVCNY
Sbjct: 113 FRCPDEMGWKPQKVPIVLEDGEVSRARETSLPVEEITKTLAKKGYEVMTSDDAGRFVCNY 172

Query: 88  VYYHSLRQAERTEYK 147
           VYYHSLRQAE    K
Sbjct: 173 VYYHSLRQAEENGIK 187

Query: 148  207
           
Sbjct: 233  187

Query: 208  253
           
Sbjct: 293  187

[Close]

BLAST of CU121343 vs. NCBI nr
Match: gi|659099284|ref|XP_008450523.1| (PREDICTED: uncharacterized protein LOC103492104 [Cucumis melo])

HSP 1 Score: 142.5 bits (358), Expect = 3.8e-31
Identity = 68/75 (90.67%), Postives = 68/75 (90.67%), Query Frame = -1


Query: 28  FVCPDEMGWKPQKVPIVLEDGEVSRARETSLPVEEITKTLAKKGYEVMTSDDAGRFVCNY 87
           F CPDEMGWKPQKVPIV EDGEVSR RETSLPVEEITKTLAKKGYEVMTSDDAGRFVCNY
Sbjct: 113 FRCPDEMGWKPQKVPIVPEDGEVSRTRETSLPVEEITKTLAKKGYEVMTSDDAGRFVCNY 172

Query: 88  VYYHSLRQAERTEYK 147
           VYYHSLRQAE    K
Sbjct: 173 VYYHSLRQAEENGIK 187

Query: 148  207
           
Sbjct: 233  187

Query: 208  253
           
Sbjct: 293  187

[Close]

BLAST of CU121343 vs. NCBI nr
Match: gi|641819522|gb|KDO39791.1| (hypothetical protein CISIN_1g024368mg [Citrus sinensis])

HSP 1 Score: 131.3 bits (329), Expect = 8.7e-28
Identity = 61/75 (81.33%), Postives = 66/75 (88.00%), Query Frame = -1


Query: 28  FVCPDEMGWKPQKVPIVLEDGEVSRARETSLPVEEITKTLAKKGYEVMTSDDAGRFVCNY 87
           F CPDEMGWKPQKVPI   DGE+SR RETS+PVEEIT+TLAKKGYEV+TSDDAGRFVCNY
Sbjct: 147 FRCPDEMGWKPQKVPIFPADGEISRVRETSIPVEEITRTLAKKGYEVITSDDAGRFVCNY 206

Query: 88  VYYHSLRQAERTEYK 147
           VYYHSLR AE+   K
Sbjct: 207 VYYHSLRFAEQNGTK 221

Query: 148  207
           
Sbjct: 267  221

Query: 208  253
           
Sbjct: 327  221

[Close]

BLAST of CU121343 vs. NCBI nr
Match: gi|224124970|ref|XP_002319470.1| (pyrrolidone-carboxylate peptidase family protein [Populus trichocarpa])

HSP 1 Score: 131.3 bits (329), Expect = 8.7e-28
Identity = 61/75 (81.33%), Postives = 66/75 (88.00%), Query Frame = -1


Query: 28  FVCPDEMGWKPQKVPIVLEDGEVSRARETSLPVEEITKTLAKKGYEVMTSDDAGRFVCNY 87
           F CPDEMGWKPQKVPI+  DG +SR RET+LPVEEITK+LAKKGYEVMTSDDAGRFVCNY
Sbjct: 113 FRCPDEMGWKPQKVPIIPSDGGISRVRETTLPVEEITKSLAKKGYEVMTSDDAGRFVCNY 172

Query: 88  VYYHSLRQAERTEYK 147
           VYYHSLR AE+   K
Sbjct: 173 VYYHSLRFAEQNGTK 187

Query: 148  207
           
Sbjct: 233  187

Query: 208  253
           
Sbjct: 293  187

[Close]

BLAST of CU121343 vs. NCBI nr
Match: gi|743830647|ref|XP_011023836.1| (PREDICTED: pyroglutamyl-peptidase 1-like [Populus euphratica])

HSP 1 Score: 131.3 bits (329), Expect = 8.7e-28
Identity = 61/75 (81.33%), Postives = 66/75 (88.00%), Query Frame = -1


Query: 28  FVCPDEMGWKPQKVPIVLEDGEVSRARETSLPVEEITKTLAKKGYEVMTSDDAGRFVCNY 87
           F CPDEMGWKPQKVPI+  DG +SR RET+LPVEEITK+LAKKGYEVMTSDDAGRFVCNY
Sbjct: 113 FRCPDEMGWKPQKVPIIPSDGGISRVRETTLPVEEITKSLAKKGYEVMTSDDAGRFVCNY 172

Query: 88  VYYHSLRQAERTEYK 147
           VYYHSLR AE+   K
Sbjct: 173 VYYHSLRFAEQNGTK 187

Query: 148  207
           
Sbjct: 233  187

Query: 208  253
           
Sbjct: 293  187

The following BLAST results are available for this feature:

BLAST of CU121343 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVQ6_CUCSA	2.4e-32	93.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560640 PE=4 SV=1	[more]
A0A067DMF7_CITSI	1.0e-27	81.33	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024368mg PE=4 SV=1	[more]
A0A067DLB0_CITSI	1.0e-27	81.33	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024368mg PE=4 SV=1	[more]
A9PBR6_POPTR	1.0e-27	81.33	Pyrrolidone-carboxylate peptidase family protein OS=Populus trichocarpa GN=POPTR...	[more]
A0A068V407_COFCA	1.0e-27	82.67	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00042842001 PE=4 SV=1	[more]

BLAST of CU121343 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778662142\|ref\|XP_011659412.1\|	2.0e-32	93.33	PREDICTED: pyroglutamyl-peptidase 1 [Cucumis sativus]	[more]
gi\|659099284\|ref\|XP_008450523.1\|	3.8e-31	90.67	PREDICTED: uncharacterized protein LOC103492104 [Cucumis melo]	[more]
gi\|641819522\|gb\|KDO39791.1\|	8.7e-28	81.33	hypothetical protein CISIN_1g024368mg [Citrus sinensis]	[more]
gi\|224124970\|ref\|XP_002319470.1\|	8.7e-28	81.33	pyrrolidone-carboxylate peptidase family protein [Populus trichocarpa]	[more]
gi\|743830647\|ref\|XP_011023836.1\|	8.7e-28	81.33	PREDICTED: pyroglutamyl-peptidase 1-like [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR016125	Peptidase_C15-like

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Csa1G560640	Csa1G560640	gene
Csa1G560650	Csa1G560650	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
FKNP3UI02MROZN	FKNP3UI02MROZN	EST
H0106941	H0106941	EST

InterPro

Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016125	Peptidase C15, pyroglutamyl peptidase I-like	GENE3D	G3DSA:3.40.630.20		coord: 2..75 score: 8.7
IPR016125	Peptidase C15, pyroglutamyl peptidase I-like	PANTHER	PTHR23402	PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED	coord: 1..71 score: 4.1
IPR016125	Peptidase C15, pyroglutamyl peptidase I-like	PFAM	PF01470	Peptidase_C15	coord: 18..76 score: 1.5
None	No IPR available	PANTHER	PTHR23402:SF17	PEPTIDASE C15, PYROGLUTAMYL PEPTIDASE I-LIKE PROTEIN	coord: 1..71 score: 4.1
None	No IPR available	unknown	SSF53182	Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)	coord: 2..75 score: 1.57