CU119239 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU119239
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 1154681 .. 1154998 (-)
Sequence length322
The following sequences are available for this feature:

transcribed_cluster sequence

ATACATTTAAAAGACAAAAAGAAAATGGTTTTGGCATTACCGGGAGATAAATTGTGTCGTTGGCCATTTGTGTAGAAGGAAAAGGAGGTTGTAAACCTGCGAAATAATAATACTAGTTCAAACACGAAACAGAAAACAGGAGAGGAATTAAAATATGCAAAATAAACATTATGCAACATTCAAATCTTAGTTGCTAGCAGGATAACTTGCCTGATTCATTGGTCAGAGCTCTCAGGTATTTGCAAGTACTTGTTGTATAGCCAGTGGGATGTGTCAAGTGCATCTCCATTGCTTTCCACAGGGTAATCTTTCTGCTGCTTTG
BLAST of CU119239 vs. TrEMBL
Match: A0A0A0LNZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G005760 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 7.6e-11
Identity = 32/38 (84.21%), Postives = 36/38 (94.74%), Query Frame = -1

Query: 209 QSSRKITLWKAMEMHLTHPTGYTTSTCKYLRALTNESG 268
           +++ + TLWKAMEMHLTHPTGYTTSTCKYLRALTNESG
Sbjct: 4   KAAERFTLWKAMEMHLTHPTGYTTSTCKYLRALTNESG 41

Query: 269 323
           
Sbjct: 64  41

BLAST of CU119239 vs. TrEMBL
Match: A0A0A0LNZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G005760 PE=4 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 6.4e-02
Identity = 19/20 (95.00%), Postives = 20/20 (100.00%), Query Frame = -1

Query: 41  AGLQPPFPSTQMANDTIYLP 100
           +GLQPPFPSTQMANDTIYLP
Sbjct: 40  SGLQPPFPSTQMANDTIYLP 59

BLAST of CU119239 vs. NCBI nr
Match: gi|700208519|gb|KGN63615.1| (hypothetical protein Csa_1G005760 [Cucumis sativus])

HSP 1 Score: 75.1 bits (183), Expect = 8.3e-11
Identity = 32/38 (84.21%), Postives = 36/38 (94.74%), Query Frame = -1

Query: 209 QSSRKITLWKAMEMHLTHPTGYTTSTCKYLRALTNESG 268
           +++ + TLWKAMEMHLTHPTGYTTSTCKYLRALTNESG
Sbjct: 4   KAAERFTLWKAMEMHLTHPTGYTTSTCKYLRALTNESG 41

Query: 269 323
           
Sbjct: 64  41

BLAST of CU119239 vs. NCBI nr
Match: gi|778655772|ref|XP_011658935.1| (PREDICTED: alpha-N-acetylglucosaminidase-like [Cucumis sativus])

HSP 1 Score: 68.6 bits (166), Expect = 7.7e-09
Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = -3

Query: 219 QKDYPVESNGDALDTSHWLYNKYLQIPESSDQ 278
           +K YPVESNGDALDTSHWLYNKYLQIPESSDQ
Sbjct: 777 RKIYPVESNGDALDTSHWLYNKYLQIPESSDQ 808

Query: 279 315
           
Sbjct: 837 808

BLAST of CU119239 vs. NCBI nr
Match: gi|659105587|ref|XP_008453133.1| (PREDICTED: alpha-N-acetylglucosaminidase-like [Cucumis melo])

HSP 1 Score: 65.9 bits (159), Expect = 5.0e-08
Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = -3

Query: 219 QKDYPVESNGDALDTSHWLYNKYLQIPESSDQ 278
           +K YPVESNGDAL TSHWLYNKYLQIPESSDQ
Sbjct: 777 RKIYPVESNGDALHTSHWLYNKYLQIPESSDQ 808

Query: 279 315
           
Sbjct: 837 808

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LNZ3_CUCSA7.6e-1184.21Uncharacterized protein OS=Cucumis sativus GN=Csa_1G005760 PE=4 SV=1[more]
A0A0A0LNZ3_CUCSA6.4e-0295.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G005760 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700208519|gb|KGN63615.1|8.3e-1184.21hypothetical protein Csa_1G005760 [Cucumis sativus][more]
gi|778655772|ref|XP_011658935.1|7.7e-0993.75PREDICTED: alpha-N-acetylglucosaminidase-like [Cucumis sativus][more]
gi|659105587|ref|XP_008453133.1|5.0e-0890.63PREDICTED: alpha-N-acetylglucosaminidase-like [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G005760Csa1G005760gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
H0128757H0128757EST
H0144838H0144838EST