Csa1G005760 (gene) Cucumber (Chinese Long) v2

NameCsa1G005760
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 1154673 .. 1155747 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGGCAAAGCAGCAGAAAGATTTACCCTGTGGAAAGCAATGGAGATGCACTTGACACATCCCACTGGCTATACAACAAGTACTTGCAAATACCTGAGAGCTCTGACCAATGAATCAGGCAAGTTATCCTGCTAGCAACTAAGATTTGAATGTTGCATAATGTTTATTTTGCATATTTTAATTCCTCTCCTGTTTTCTGTTTCGTGTTTGAACTAGTATTATTATTTCGCAGGTTTACAACCTCCTTTTCCTTCTACACAAATGGCCAACGACACAATTTATCTCCCGGTAATGCAAAACCATTTCTTTTTGTCTTTTAAATAGTATCATTGAGTTTCTTGTGAACGTTAAGCTTATTGTGTCATTTCCAATCCGAACATAATTTAACAGATAAGACATCAACTATCATGAATCTGTTGACCTAAACAAAATATATTTAATTATGATCCCAGCTCTTTGTATTTAAGAAAACAAACTATTCATTCGCTTTAGCAAAAAGAAAAGAAAAGTATATCATCCTATATTTTTGGTTTAAATATGGTTTTTGGTCTTTAACTATCACCTCTTGGTAAAAAAGGAGTCATGATCTTAATAACTAACTAAGAGAAAATATTGTTTCGGTGAAAGTTTTTTTATTTGTTTTCCATCTCATTCGTGATTCTTTTGAACATTTATGGCCTTTTGGAACAAAAATTAACTAAGATTATAATCACATTTTGCTAAGTAAATATTATTTAAAAATCTCCAATTAGCTATAGTAAACATATTTCAAAAACTTTATTATTTTTTTTTATAGTTTTTACTATTTGACATTATCATTTTTTAATTCTTTACTACAGATTTTTCTATTTTCTTATCAAACTGAAATAGTTTATACACCAAACACATATTATTATAACTCAATTAATACGTACCTCAAACACAAACTATTCTAATTTAAGTATAATAGTCTAGAACTCCTGGTCTTGTAACTAAAATTATAAAGTATGTATTATATGTAATAACAGGGAAGATGACAGCATCTAAAATCCTTTTTCTAAAGGGAAAACGAAGACTAAAGTTAAAATTCTGA

mRNA sequence

ATGATTGGCAAAGCAGCAGAAAGATTTACCCTGTGGAAAGCAATGGAGATGCACTTGACACATCCCACTGGCTATACAACAAGTACTTGCAAATACCTGAGAGCTCTGACCAATGAATCAGGTTTACAACCTCCTTTTCCTTCTACACAAATGGCCAACGACACAATTTATCTCCCGTATGTATTATATGTAATAACAGGGAAGATGACAGCATCTAAAATCCTTTTTCTAAAGGGAAAACGAAGACTAAAGTTAAAATTCTGA

Coding sequence (CDS)

ATGATTGGCAAAGCAGCAGAAAGATTTACCCTGTGGAAAGCAATGGAGATGCACTTGACACATCCCACTGGCTATACAACAAGTACTTGCAAATACCTGAGAGCTCTGACCAATGAATCAGGTTTACAACCTCCTTTTCCTTCTACACAAATGGCCAACGACACAATTTATCTCCCGTATGTATTATATGTAATAACAGGGAAGATGACAGCATCTAAAATCCTTTTTCTAAAGGGAAAACGAAGACTAAAGTTAAAATTCTGA

Protein sequence

MIGKAAERFTLWKAMEMHLTHPTGYTTSTCKYLRALTNESGLQPPFPSTQMANDTIYLPYVLYVITGKMTASKILFLKGKRRLKLKF*
BLAST of Csa1G005760 vs. TrEMBL
Match: A0A0A0LNZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G005760 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.1e-42
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1

Query: 1  MIGKAAERFTLWKAMEMHLTHPTGYTTSTCKYLRALTNESGLQPPFPSTQMANDTIYLPY 60
          MIGKAAERFTLWKAMEMHLTHPTGYTTSTCKYLRALTNESGLQPPFPSTQMANDTIYLPY
Sbjct: 1  MIGKAAERFTLWKAMEMHLTHPTGYTTSTCKYLRALTNESGLQPPFPSTQMANDTIYLPY 60

Query: 61 VLYVITGKMTASKILFLKGKRRLKLKF 88
          VLYVITGKMTASKILFLKGKRRLKLKF
Sbjct: 61 VLYVITGKMTASKILFLKGKRRLKLKF 87

BLAST of Csa1G005760 vs. NCBI nr
Match: gi|700208519|gb|KGN63615.1| (hypothetical protein Csa_1G005760 [Cucumis sativus])

HSP 1 Score: 180.3 bits (456), Expect = 1.5e-42
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 1

Query: 1  MIGKAAERFTLWKAMEMHLTHPTGYTTSTCKYLRALTNESGLQPPFPSTQMANDTIYLPY 60
          MIGKAAERFTLWKAMEMHLTHPTGYTTSTCKYLRALTNESGLQPPFPSTQMANDTIYLPY
Sbjct: 1  MIGKAAERFTLWKAMEMHLTHPTGYTTSTCKYLRALTNESGLQPPFPSTQMANDTIYLPY 60

Query: 61 VLYVITGKMTASKILFLKGKRRLKLKF 88
          VLYVITGKMTASKILFLKGKRRLKLKF
Sbjct: 61 VLYVITGKMTASKILFLKGKRRLKLKF 87

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LNZ3_CUCSA1.1e-42100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G005760 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700208519|gb|KGN63615.1|1.5e-42100.00hypothetical protein Csa_1G005760 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU119239cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G005760.1Csa1G005760.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU119239CU119239transcribed_cluster


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G005760Silver-seed gourdcarcuB0391
Csa1G005760Silver-seed gourdcarcuB0524
Csa1G005760Silver-seed gourdcarcuB0638
Csa1G005760Silver-seed gourdcarcuB1018
Csa1G005760Watermelon (97103) v2cuwmbB004
Csa1G005760Watermelon (97103) v2cuwmbB060
Csa1G005760Watermelon (97103) v2cuwmbB078
Csa1G005760Wax gourdcuwgoB060
Csa1G005760Wax gourdcuwgoB070
Csa1G005760Wax gourdcuwgoB095
Csa1G005760Cucumber (Chinese Long) v2cucuB001
Csa1G005760Cucumber (Chinese Long) v2cucuB022
Csa1G005760Cucumber (Chinese Long) v2cucuB029
Csa1G005760Watermelon (97103) v1cuwmB094
Csa1G005760Cucumber (Gy14) v1cgycuB107
Csa1G005760Cucumber (Gy14) v1cgycuB299
Csa1G005760Cucumber (Gy14) v1cgycuB404
Csa1G005760Cucumber (Gy14) v1cgycuB475
Csa1G005760Cucurbita maxima (Rimu)cmacuB048
Csa1G005760Cucurbita maxima (Rimu)cmacuB097
Csa1G005760Cucurbita maxima (Rimu)cmacuB209
Csa1G005760Cucurbita maxima (Rimu)cmacuB235
Csa1G005760Cucurbita maxima (Rimu)cmacuB402
Csa1G005760Cucurbita maxima (Rimu)cmacuB685
Csa1G005760Cucurbita moschata (Rifu)cmocuB076
Csa1G005760Cucurbita moschata (Rifu)cmocuB037
Csa1G005760Cucurbita moschata (Rifu)cmocuB194
Csa1G005760Cucurbita moschata (Rifu)cmocuB222
Csa1G005760Cucurbita moschata (Rifu)cmocuB390
Csa1G005760Cucurbita moschata (Rifu)cmocuB673
Csa1G005760Melon (DHL92) v3.5.1cumeB009
Csa1G005760Melon (DHL92) v3.5.1cumeB019
Csa1G005760Melon (DHL92) v3.5.1cumeB054
Csa1G005760Melon (DHL92) v3.5.1cumeB066
Csa1G005760Watermelon (Charleston Gray)cuwcgB005
Csa1G005760Watermelon (Charleston Gray)cuwcgB015
Csa1G005760Watermelon (Charleston Gray)cuwcgB062
Csa1G005760Watermelon (Charleston Gray)cuwcgB081
Csa1G005760Watermelon (97103) v1cuwmB005
Csa1G005760Watermelon (97103) v1cuwmB037
Csa1G005760Watermelon (97103) v1cuwmB055
Csa1G005760Cucurbita pepo (Zucchini)cpecuB025
Csa1G005760Cucurbita pepo (Zucchini)cpecuB361
Csa1G005760Cucurbita pepo (Zucchini)cpecuB520
Csa1G005760Cucurbita pepo (Zucchini)cpecuB653
Csa1G005760Bottle gourd (USVL1VR-Ls)culsiB070
Csa1G005760Bottle gourd (USVL1VR-Ls)culsiB035
Csa1G005760Bottle gourd (USVL1VR-Ls)culsiB045
Csa1G005760Cucumber (Gy14) v2cgybcuB001
Csa1G005760Cucumber (Gy14) v2cgybcuB011
Csa1G005760Cucumber (Gy14) v2cgybcuB098
Csa1G005760Cucumber (Gy14) v2cgybcuB200
Csa1G005760Melon (DHL92) v3.6.1cumedB004
Csa1G005760Melon (DHL92) v3.6.1cumedB014
Csa1G005760Melon (DHL92) v3.6.1cumedB046
Csa1G005760Melon (DHL92) v3.6.1cumedB060