CU118598 (transcribed_cluster) Cucumber (Chinese Long) v2

Overview
NameCU118598
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 16675185 .. 16675399 (-)
Sequence length216
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

GAAGCGGAACAGTTTTCGGCAGCGGTGCGAGCCTTTCAATGAACTGGATGCCGCTGCTCCACCATCGCCCGCGTAACCCACGCACGAAAGAGGTTCGTGTCTTCTTCGACGGCGTTACGACAGTATCCGCACTCACGAGCATCGCTAACTTCAGTTTCCGGCGAATTCCAGCGTTTGCCTTGAATGGTAGCCTGTGTGGCTTCTTCTTCCTCTCTT
Homology
[Close]
BLAST of CU118598 vs. TrEMBL
Match: A0A0A0KYI6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G439070 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 7.0e-29
Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = -2 

Query: 15  REEEEATQATIQGKRWNSPETEVSDARECGYCRNAVEEDTNLFRAWVTRAMVEQRHPVH* 74
           REEEEATQATIQGKRWNSPE EV+DARECGYCRNAVEEDTNLFRAWVTRAMVEQRHPVH 
Sbjct: 20  REEEEATQATIQGKRWNSPEIEVTDARECGYCRNAVEEDTNLFRAWVTRAMVEQRHPVHR 79

Query: 75  KARTAAE 134
           +ARTAAE
Sbjct: 80  RARTAAE 86

Query: 135  194
           
Sbjct: 140  86

Query: 195  216
           
Sbjct: 200  86

[Close]
BLAST of CU118598 vs. NCBI nr
Match: gi|700199582|gb|KGN54740.1| (hypothetical protein Csa_4G439070 [Cucumis sativus])

HSP 1 Score: 130.6 bits (327), Expect = 1.1e-27
Identity = 63/67 (94.03%), Postives = 65/67 (97.01%), Query Frame = -2 

Query: 15  REEEEATQATIQGKRWNSPETEVSDARECGYCRNAVEEDTNLFRAWVTRAMVEQRHPVH* 74
           REEEEATQATIQGKRWNSPE EV+DARECGYCRNAVEEDTNLFRAWVTRAMVEQRHPVH 
Sbjct: 20  REEEEATQATIQGKRWNSPEIEVTDARECGYCRNAVEEDTNLFRAWVTRAMVEQRHPVHR 79

Query: 75  KARTAAE 134
           +ARTAAE
Sbjct: 80  RARTAAE 86

Query: 135  194
           
Sbjct: 140  86

Query: 195  216
           
Sbjct: 200  86

The following BLAST results are available for this feature:
BLAST of CU118598 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYI6_CUCSA7.0e-2994.03Uncharacterized protein OS=Cucumis sativus GN=Csa_4G439070 PE=4 SV=1[more]
BLAST of CU118598 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700199582|gb|KGN54740.1|1.1e-2794.03hypothetical protein Csa_4G439070 [Cucumis sativus][more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G439070Csa4G439070gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0077091G0077091EST
H0163039H0163039EST