CU116723 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU116723
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 8511230 .. 8511443 (+)
Sequence length224
The following sequences are available for this feature:

transcribed_cluster sequence

CGGCCGGGGAGGTCAAGTTCTACGTCCACCTCTCACCCTCTCGTCTCGGCCTATCATCTCACGCCGTCGTCGCTGTTCAATCGTCTCTCCTTCTCAGTCTCCGGCGGTCATCTCCGATCGTCTCCACTTCTCAGAAGTCTCCGATTGTCGCTCGCGCTTGGCTCTCCCTCACCATTGCGTTGTTGTGTTGCCGCTGGCTACGATACCTTGTTGTGTACAACTCA
Library categoryESTs
fruit (8DPP) library2
BLAST of CU116723 vs. TrEMBL
Match: A0A0A0K8Z3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G237810 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 4.0e-11
Identity = 40/65 (61.54%), Postives = 40/65 (61.54%), Query Frame = 3

Query: 30  LSPSRLGXXXXXXXXXXXXXXXXXXXXXXXXXTSQKSPIVARAWLSLTIALLCCRWLRYL 89
           LSPSRLG                         TSQKSPIVARAWLSLTIALLCCRWLRYL
Sbjct: 13  LSPSRLGLSSHAVVAVQSSLLLSLRRSSPIVSTSQKSPIVARAWLSLTIALLCCRWLRYL 72

Query: 90  VVYNS 149
           VVYNS
Sbjct: 73  VVYNS 77

Query: 150 209
           
Sbjct: 133 77

Query: 210 225
           
Sbjct: 193 77

BLAST of CU116723 vs. NCBI nr
Match: gi|700189033|gb|KGN44266.1| (hypothetical protein Csa_7G237810 [Cucumis sativus])

HSP 1 Score: 74.7 bits (182), Expect = 7.5e-11
Identity = 40/65 (61.54%), Postives = 40/65 (61.54%), Query Frame = 3

Query: 30  LSPSRLGXXXXXXXXXXXXXXXXXXXXXXXXXTSQKSPIVARAWLSLTIALLCCRWLRYL 89
           LSPSRLG                         TSQKSPIVARAWLSLTIALLCCRWLRYL
Sbjct: 13  LSPSRLGLSSHAVVAVQSSLLLSLRRSSPIVSTSQKSPIVARAWLSLTIALLCCRWLRYL 72

Query: 90  VVYNS 149
           VVYNS
Sbjct: 73  VVYNS 77

Query: 150 209
           
Sbjct: 133 77

Query: 210 225
           
Sbjct: 193 77

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K8Z3_CUCSA4.0e-1161.54Uncharacterized protein OS=Cucumis sativus GN=Csa_7G237810 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700189033|gb|KGN44266.1|7.5e-1161.54hypothetical protein Csa_7G237810 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa7G237810Csa7G237810gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02LJ9QQFKNP3UI02LJ9QQEST
FKNP3UI02M16KQFKNP3UI02M16KQEST