Csa7G237810 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G237810
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 8511079 .. 8511508 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAATGTTACCAAACCGTCAAAAAAAAATGGAAAAATTTGTGAAAGATTGAATTAAATATATTTGTTAAATATTATGATAATTTCCCTATATATTTTGTATATTTATTATTAATTTAGTAAATAAAGGCAAAATAGTTAGGTCACGCAGGTCAAGTTCACGCCGCCTCTCACCCTCTCGTCTCGGCCTATCATCTCACGCCGTCGTCGCTGTTCAATCGTCTCTCCTTCTCAGTCTCCGGCGGTCATCTCCGATCGTCTCCACTTCTCAGAAGTCTCCGATTGTCGCTCGCGCTTGGCTCTCCCTCACCATTGCGTTGTTGTGTTGCCGCTGGCTACGATACCTTGTTGTGTACAACTCATCCTCGAGGACAGACCAATCGGATTATTTTCTCAAGGTAAATAATTTCGTTTCTACATTGCTGTGA

mRNA sequence

ATGGGAAATGTTACCAAACCGTCAAGTTCACGCCGCCTCTCACCCTCTCGTCTCGGCCTATCATCTCACGCCGTCGTCGCTGTTCAATCGTCTCTCCTTCTCAGTCTCCGGCGGTCATCTCCGATCGTCTCCACTTCTCAGAAGTCTCCGATTGTCGCTCGCGCTTGGCTCTCCCTCACCATTGCGTTGTTGTGTTGCCGCTGGCTACGATACCTTGTTGTGTACAACTCATCCTCGAGGACAGACCAATCGGATTATTTTCTCAAGGTAAATAATTTCGTTTCTACATTGCTGTGA

Coding sequence (CDS)

ATGGGAAATGTTACCAAACCGTCAAGTTCACGCCGCCTCTCACCCTCTCGTCTCGGCCTATCATCTCACGCCGTCGTCGCTGTTCAATCGTCTCTCCTTCTCAGTCTCCGGCGGTCATCTCCGATCGTCTCCACTTCTCAGAAGTCTCCGATTGTCGCTCGCGCTTGGCTCTCCCTCACCATTGCGTTGTTGTGTTGCCGCTGGCTACGATACCTTGTTGTGTACAACTCATCCTCGAGGACAGACCAATCGGATTATTTTCTCAAGGTAAATAATTTCGTTTCTACATTGCTGTGA

Protein sequence

MGNVTKPSSSRRLSPSRLGLSSHAVVAVQSSLLLSLRRSSPIVSTSQKSPIVARAWLSLTIALLCCRWLRYLVVYNSSSRTDQSDYFLKVNNFVSTLL*
Homology
[Close]
BLAST of Csa7G237810 vs. TrEMBL
Match: A0A0A0K8Z3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G237810 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.1e-45
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 1 

Query: 1  MGNVTKPSSSRRLSPSRLGLSSHAVVAVQSSLLLSLRRSSPIVSTSQKSPIVARAWLSLT 60
          MGNVTKPSSSRRLSPSRLGLSSHAVVAVQSSLLLSLRRSSPIVSTSQKSPIVARAWLSLT
Sbjct: 1  MGNVTKPSSSRRLSPSRLGLSSHAVVAVQSSLLLSLRRSSPIVSTSQKSPIVARAWLSLT 60

Query: 61 IALLCCRWLRYLVVYNSSSRTDQSDYFLKVNNFVSTLL 99
          IALLCCRWLRYLVVYNSSSRTDQSDYFLKVNNFVSTLL
Sbjct: 61 IALLCCRWLRYLVVYNSSSRTDQSDYFLKVNNFVSTLL 98

[Close]
BLAST of Csa7G237810 vs. NCBI nr
Match: gi|700189033|gb|KGN44266.1| (hypothetical protein Csa_7G237810 [Cucumis sativus])

HSP 1 Score: 190.3 bits (482), Expect = 1.6e-45
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 1 

Query: 1  MGNVTKPSSSRRLSPSRLGLSSHAVVAVQSSLLLSLRRSSPIVSTSQKSPIVARAWLSLT 60
          MGNVTKPSSSRRLSPSRLGLSSHAVVAVQSSLLLSLRRSSPIVSTSQKSPIVARAWLSLT
Sbjct: 1  MGNVTKPSSSRRLSPSRLGLSSHAVVAVQSSLLLSLRRSSPIVSTSQKSPIVARAWLSLT 60

Query: 61 IALLCCRWLRYLVVYNSSSRTDQSDYFLKVNNFVSTLL 99
          IALLCCRWLRYLVVYNSSSRTDQSDYFLKVNNFVSTLL
Sbjct: 61 IALLCCRWLRYLVVYNSSSRTDQSDYFLKVNNFVSTLL 98

The following BLAST results are available for this feature:
BLAST of Csa7G237810 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8Z3_CUCSA1.1e-45100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G237810 PE=4 SV=1[more]
BLAST of Csa7G237810 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189033|gb|KGN44266.1|1.6e-45100.00hypothetical protein Csa_7G237810 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU116723cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G237810.1Csa7G237810.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU116723CU116723transcribed_cluster