CU113040 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU113040
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 12181521 .. 12181748 (+)
Sequence length227
The following sequences are available for this feature:

transcribed_cluster sequence

GAGTGGAGAAAGGAGGATAATTCCTTGGGGGATCGGTGCAGTACAGGTGGATGTCGACATGGCAATTAGCTTGGCATCGAAATCGGGGGCCGGAGCCGACGGTTTTGCAGATGTGGCAAGTGTATTCTTGGTCGTCGGAATAATGGGTTAGAGGATGGTCTGGATGGAAATGGGAGATGAAATGGTGTGTGGGCACTGGTATCGCCATTGTTTATCTCAGCACTGAC
Library categoryESTs
gynoecious flower library2
BLAST of CU113040 vs. TrEMBL
Match: A0A0A0L121_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G297435 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.9e-33
Identity = 62/67 (92.54%), Postives = 63/67 (94.03%), Query Frame = -2

Query: 8   MAIPVPTHHFISHFHPDHPLTHYSDDQEYTCHICKTVGSGPRFRCQANCHVDIHLYCTDP 67
           MAIPVPTHHFISHFHPDHPLTHYSDDQEYTCHICKTVGSGPRFRCQANCHVDIHLYCTDP
Sbjct: 1   MAIPVPTHHFISHFHPDHPLTHYSDDQEYTCHICKTVGSGPRFRCQANCHVDIHLYCTDP 60

Query: 68  PRNYPPF 127
           P+    F
Sbjct: 61  PKELSSF 67

Query: 128 187
           
Sbjct: 121 67

Query: 188 209
           
Sbjct: 181 67

BLAST of CU113040 vs. TrEMBL
Match: A0A0A0L2C5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G297420 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.6e-07
Identity = 30/59 (50.85%), Postives = 38/59 (64.41%), Query Frame = -2

Query: 26  PVPTHHFISHFHPDHPLTHYSDDQ-EYTCHICKTVGSGPRFRCQANCHVDIHLYCTDPP 85
           PVPT       HP+HPL  +SDD+ +Y C  CKT GSG RFRC  +C+ D+H YC + P
Sbjct: 3   PVPTTTKFHFTHPNHPLQLHSDDRHDYICGGCKTSGSGSRFRCH-SCNFDLHDYCANCP 60

Query: 86  145
           
Sbjct: 63  60

Query: 146 200
           
Sbjct: 123 60

BLAST of CU113040 vs. TrEMBL
Match: A0A0A0KXA5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G296870 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 3.0e-06
Identity = 27/50 (54.00%), Postives = 32/50 (64.00%), Query Frame = -2

Query: 26  HF-HPDHPLTHYSDDQEYTCHICKTVGSGPRFRCQANCHVDIHLYCTDPP 85
           HF HP+HPL H S+DQ+Y C  CKT GS  R+RC   C  DIH  C + P
Sbjct: 14  HFTHPNHPLIHLSNDQDYFCDGCKTFGSDSRYRCHC-CDFDIHELCANCP 62

Query: 86  145
           
Sbjct: 74  62

Query: 146 173
           
Sbjct: 134 62

BLAST of CU113040 vs. NCBI nr
Match: gi|449448872|ref|XP_004142189.1| (PREDICTED: diacylglycerol kinase theta-like [Cucumis sativus])

HSP 1 Score: 148.3 bits (373), Expect = 5.4e-33
Identity = 62/67 (92.54%), Postives = 63/67 (94.03%), Query Frame = -2

Query: 8   MAIPVPTHHFISHFHPDHPLTHYSDDQEYTCHICKTVGSGPRFRCQANCHVDIHLYCTDP 67
           MAIPVPTHHFISHFHPDHPLTHYSDDQEYTCHICKTVGSGPRFRCQANCHVDIHLYCTDP
Sbjct: 1   MAIPVPTHHFISHFHPDHPLTHYSDDQEYTCHICKTVGSGPRFRCQANCHVDIHLYCTDP 60

Query: 68  PRNYPPF 127
           P+    F
Sbjct: 61  PKELSSF 67

Query: 128 187
           
Sbjct: 121 67

Query: 188 209
           
Sbjct: 181 67

BLAST of CU113040 vs. NCBI nr
Match: gi|659069139|ref|XP_008448343.1| (PREDICTED: uncharacterized protein LOC103490565 [Cucumis melo])

HSP 1 Score: 104.0 bits (258), Expect = 1.2e-19
Identity = 47/67 (70.15%), Postives = 52/67 (77.61%), Query Frame = -2

Query: 8   MAIPVPTHHFISHFHPDHPLTHYSDDQEYTCHICKTVGSGPRFRCQANCHVDIHLYCTDP 67
           MA+  PT+HF SHFHP+HPLTHYSDDQEYTCHIC TV SG RFRCQ  CHVDIH+ C+D 
Sbjct: 1   MAMNAPTYHF-SHFHPNHPLTHYSDDQEYTCHICNTVDSGLRFRCQP-CHVDIHVCCSDS 60

Query: 68  PRNYPPF 127
           P     F
Sbjct: 61  PEELSSF 65

Query: 128 187
           
Sbjct: 121 65

Query: 188 209
           
Sbjct: 181 65

BLAST of CU113040 vs. NCBI nr
Match: gi|659069141|ref|XP_008448356.1| (PREDICTED: uncharacterized protein LOC103490570 [Cucumis melo])

HSP 1 Score: 101.3 bits (251), Expect = 7.6e-19
Identity = 45/67 (67.16%), Postives = 52/67 (77.61%), Query Frame = -2

Query: 8   MAIPVPTHHFISHFHPDHPLTHYSDDQEYTCHICKTVGSGPRFRCQANCHVDIHLYCTDP 67
           MA+  PT+HF SHFHP+HPLTHYSDDQ+YTCHIC TV SG RFRCQ  CHVDIH +C++ 
Sbjct: 1   MAMNAPTYHF-SHFHPNHPLTHYSDDQKYTCHICNTVDSGLRFRCQP-CHVDIHKFCSNS 60

Query: 68  PRNYPPF 127
           P     F
Sbjct: 61  PEELSSF 65

Query: 128 187
           
Sbjct: 121 65

Query: 188 209
           
Sbjct: 181 65

BLAST of CU113040 vs. NCBI nr
Match: gi|659069129|ref|XP_008448294.1| (PREDICTED: uncharacterized protein LOC103490529 [Cucumis melo])

HSP 1 Score: 62.0 bits (149), Expect = 5.1e-07
Identity = 28/56 (50.00%), Postives = 34/56 (60.71%), Query Frame = -2

Query: 8   HF-HPDHPLTHYSDDQEYTCHICKTVGSGPRFRCQANCHVDIHLYCTDPPRNYPPF 67
           HF HP+HPL H S+DQ+Y C  CKT GS  R+RC   C  DIH +C + P     F
Sbjct: 13  HFTHPNHPLIHLSNDQDYFCDACKTFGSDSRYRCHC-CDFDIHEFCANCPAKLSSF 67

Query: 68  127
           
Sbjct: 73  67

Query: 128 173
           
Sbjct: 133 67

BLAST of CU113040 vs. NCBI nr
Match: gi|449448874|ref|XP_004142190.1| (PREDICTED: uncharacterized protein LOC101223041 [Cucumis sativus])

HSP 1 Score: 61.2 bits (147), Expect = 8.7e-07
Identity = 30/59 (50.85%), Postives = 38/59 (64.41%), Query Frame = -2

Query: 26  PVPTHHFISHFHPDHPLTHYSDDQ-EYTCHICKTVGSGPRFRCQANCHVDIHLYCTDPP 85
           PVPT       HP+HPL  +SDD+ +Y C  CKT GSG RFRC  +C+ D+H YC + P
Sbjct: 3   PVPTTTKFHFTHPNHPLQLHSDDRHDYICGGCKTSGSGSRFRCH-SCNFDLHDYCANCP 60

Query: 86  145
           
Sbjct: 63  60

Query: 146 200
           
Sbjct: 123 60

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L121_CUCSA2.9e-3392.54Uncharacterized protein OS=Cucumis sativus GN=Csa_4G297435 PE=4 SV=1[more]
A0A0A0L2C5_CUCSA3.6e-0750.85Uncharacterized protein OS=Cucumis sativus GN=Csa_4G297420 PE=4 SV=1[more]
A0A0A0KXA5_CUCSA3.0e-0654.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G296870 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449448872|ref|XP_004142189.1|5.4e-3392.54PREDICTED: diacylglycerol kinase theta-like [Cucumis sativus][more]
gi|659069139|ref|XP_008448343.1|1.2e-1970.15PREDICTED: uncharacterized protein LOC103490565 [Cucumis melo][more]
gi|659069141|ref|XP_008448356.1|7.6e-1967.16PREDICTED: uncharacterized protein LOC103490570 [Cucumis melo][more]
gi|659069129|ref|XP_008448294.1|5.1e-0750.00PREDICTED: uncharacterized protein LOC103490529 [Cucumis melo][more]
gi|449448874|ref|XP_004142190.1|8.7e-0750.85PREDICTED: uncharacterized protein LOC101223041 [Cucumis sativus][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR004146DC1
IPR013083Znf_RING/FYVE/PHD

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G297430Csa4G297430gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0002435G0002435EST
G0025169G0025169EST


Analysis Name: InterPro Annotations of cucumber unigene v3
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004146DC1PFAMPF03107C1_2coord: 14..57
score: 4.
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 13..66
score: 1.
NoneNo IPR availableunknownSSF57889Cysteine-rich domaincoord: 10..64
score: 6.