CU112653 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU112653
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 14103066 .. 14106605 (+)
Sequence length263
The following sequences are available for this feature:

transcribed_cluster sequence

CGGCCGGGGAAGGAAAGAAGCTTCGTTTTCTCTTGATTATCTCATTGTCTCTGTTTCCGCCCATTTTTCTTTTTCATTCGGAGTTTGGTTCCTGAGAATAATCAGAGCCACGGAGATTCTTCAAAGAAAACAATTTGAAAGTTGGAGTTTAAATTAAAGAATAGTCATGGGTGGAGAATTACCTCTGAATGCAATTCCTTTGGAGAGTAGACCTGGCATCCTTTTAGTTGGATCTTCGAATGTTGGCAAGCGCTCCCTCCTAT
Library categoryESTs
fruit (8DPP) library2
BLAST of CU112653 vs. TrEMBL
Match: A0A0A0L1S1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G340530 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 4.9e-08
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 2

Query: 167 MGGELPLNAIPLESRPGILLVGSSNVGKRSLL 226
           MGGELPLNAIPLESRPGILLVGSSNVGKRSLL
Sbjct: 1   MGGELPLNAIPLESRPGILLVGSSNVGKRSLL 32

Query: 227 263
           
Sbjct: 61  32

BLAST of CU112653 vs. NCBI nr
Match: gi|778694174|ref|XP_011653760.1| (PREDICTED: uncharacterized protein LOC101203083 [Cucumis sativus])

HSP 1 Score: 65.9 bits (159), Expect = 4.1e-08
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 2

Query: 167 MGGELPLNAIPLESRPGILLVGSSNVGKRSLL 226
           MGGELPLNAIPLESRPGILLVGSSNVGKRSLL
Sbjct: 1   MGGELPLNAIPLESRPGILLVGSSNVGKRSLL 32

Query: 227 263
           
Sbjct: 61  32

BLAST of CU112653 vs. NCBI nr
Match: gi|659129296|ref|XP_008464616.1| (PREDICTED: uncharacterized protein LOC103502455 [Cucumis melo])

HSP 1 Score: 58.5 bits (140), Expect = 6.6e-06
Identity = 28/32 (87.50%), Postives = 29/32 (90.62%), Query Frame = 2

Query: 167 MGGELPLNAIPLESRPGILLVGSSNVGKRSLL 226
           MGGELPL+ IPLESRPGIL VGS NVGKRSLL
Sbjct: 1   MGGELPLDPIPLESRPGILFVGSPNVGKRSLL 32

Query: 227 263
           
Sbjct: 61  32

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L1S1_CUCSA4.9e-08100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G340530 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778694174|ref|XP_011653760.1|4.1e-08100.00PREDICTED: uncharacterized protein LOC101203083 [Cucumis sativus][more]
gi|659129296|ref|XP_008464616.1|6.6e-0687.50PREDICTED: uncharacterized protein LOC103502455 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G340530Csa4G340530gene
Csa4G340520Csa4G340520gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02LTTROFKNP3UI02LTTROEST
FKNP3UI02NW9LAFKNP3UI02NW9LAEST