Csa4G340520 (gene) Cucumber (Chinese Long) v2

NameCsa4G340520
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 14103355 .. 14103645 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAGAAATGGGCTTGTTGTTCTTGTTACTTTATTTTGAATGTGCAAATGGGGATGGGGGATTTTGGAGAATTAGGGTTTTTCTTGGTTGTTCTTGCCGTCGATTGGAACATTTGTTTCTATCAGGGTTTGTTCTTCCGATGCTAAAGTTTGAGAATTTGGAGTTAGTCTTAGCAATCACTGCACTTCCTTTTCAGTATTTTTATTAATTAAAAGCTGAGGCATCTGATTCGTGTATCACTTCCATGAATTGCGGCTCCGAGACATTGCTTTATGGGAATAAAGAGTTCTAA

mRNA sequence

ATGGGGATGGGGGATTTTGGAGAATTAGGGTTTTTCTTGGTTGTTCTTGCCGTCGATTGGAACATTTGTTTCTATCAGGCTGAGGCATCTGATTCGTGTATCACTTCCATGAATTGCGGCTCCGAGACATTGCTTTATGGGAATAAAGAGTTCTAA

Coding sequence (CDS)

ATGGGGATGGGGGATTTTGGAGAATTAGGGTTTTTCTTGGTTGTTCTTGCCGTCGATTGGAACATTTGTTTCTATCAGGCTGAGGCATCTGATTCGTGTATCACTTCCATGAATTGCGGCTCCGAGACATTGCTTTATGGGAATAAAGAGTTCTAA

Protein sequence

MGMGDFGELGFFLVVLAVDWNICFYQAEASDSCITSMNCGSETLLYGNKEF*
BLAST of Csa4G340520 vs. TrEMBL
Match: A0A0A0L335_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G340520 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 3.5e-22
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 1

Query: 1  MGMGDFGELGFFLVVLAVDWNICFYQAEASDSCITSMNCGSETLLYGNKEF 52
          MGMGDFGELGFFLVVLAVDWNICFYQAEASDSCITSMNCGSETLLYGNKEF
Sbjct: 1  MGMGDFGELGFFLVVLAVDWNICFYQAEASDSCITSMNCGSETLLYGNKEF 51

BLAST of Csa4G340520 vs. NCBI nr
Match: gi|700199343|gb|KGN54501.1| (hypothetical protein Csa_4G340520 [Cucumis sativus])

HSP 1 Score: 111.3 bits (277), Expect = 5.1e-22
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 1

Query: 1  MGMGDFGELGFFLVVLAVDWNICFYQAEASDSCITSMNCGSETLLYGNKEF 52
          MGMGDFGELGFFLVVLAVDWNICFYQAEASDSCITSMNCGSETLLYGNKEF
Sbjct: 1  MGMGDFGELGFFLVVLAVDWNICFYQAEASDSCITSMNCGSETLLYGNKEF 51

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L335_CUCSA3.5e-22100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G340520 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700199343|gb|KGN54501.1|5.1e-22100.00hypothetical protein Csa_4G340520 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU112653cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G340520.1Csa4G340520.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU112653CU112653transcribed_cluster