CU112353 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU112353
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 1878523 .. 1878768 (+)
Sequence length246
The following sequences are available for this feature:

transcribed_cluster sequence

GTAATCACAAACATATTTTAAATATAATTATATGATGAAAGAGTGATAACACTCTAAGCTAAAAACAAATTACAATAATTTAATTATGGAAACAAAAATTAAAAAACTAAGAAAAAACAAATACAACTTTCTACACATTGGAATTAGGTCCATTGGGATGAATAGTGACAGTTTGACGCTCGGTTTCGAAGACACGATTTTTATAAATCCTATCGATGTAATCTTTGGCCTTTCTATCGATCCCCG
BLAST of CU112353 vs. TrEMBL
Match: A0A0A0KBW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G016910 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 1.4e-20
Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 2

Query: 86  METKIKKLRKNKYNFLHIGIRSIGMNSDSLTLGFEDTIFINPIDVIFGLSIDP 145
           METKIKKLRKNKYNFLHIGIRSIGMNSDSLTL FEDTIFINPIDVIFGLSIDP
Sbjct: 1   METKIKKLRKNKYNFLHIGIRSIGMNSDSLTLSFEDTIFINPIDVIFGLSIDP 53

Query: 146 205
           
Sbjct: 61  53

Query: 206 245
           
Sbjct: 121 53

BLAST of CU112353 vs. TrEMBL
Match: A0A0A0K8W0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G016905 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 2.2e-10
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = -3

Query: 146 GIDRKAKDYIDRIYKNRVFETERQTVTIHPNGP 205
           GIDRKAKDYIDRIYKNRVFETERQTVTIHPNGP
Sbjct: 62  GIDRKAKDYIDRIYKNRVFETERQTVTIHPNGP 94

Query: 206 245
           
Sbjct: 122 94

BLAST of CU112353 vs. TrEMBL
Match: A0A0A0KBW1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014870 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.0e-07
Identity = 29/32 (90.62%), Postives = 31/32 (96.88%), Query Frame = -3

Query: 149 GIDRKAKDYIDRIYKNRVFETERQTVTIHPNG 208
           GIDRKAKDYIDRIY+NRVFE+ERQTVTI PNG
Sbjct: 62  GIDRKAKDYIDRIYRNRVFESERQTVTISPNG 93

Query: 209 245
           
Sbjct: 122 93

BLAST of CU112353 vs. TrEMBL
Match: A0A0A0KAK6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014890 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.0e-07
Identity = 29/32 (90.62%), Postives = 31/32 (96.88%), Query Frame = -3

Query: 149 GIDRKAKDYIDRIYKNRVFETERQTVTIHPNG 208
           GIDRKAKDYIDRIY+NRVFE+ERQTVTI PNG
Sbjct: 63  GIDRKAKDYIDRIYRNRVFESERQTVTISPNG 94

Query: 209 245
           
Sbjct: 123 94

BLAST of CU112353 vs. TrEMBL
Match: A0A0A0K7Y2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014900 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.0e-07
Identity = 29/32 (90.62%), Postives = 31/32 (96.88%), Query Frame = -3

Query: 149 GIDRKAKDYIDRIYKNRVFETERQTVTIHPNG 208
           GIDRKAKDYIDRIY+NRVFE+ERQTVTI PNG
Sbjct: 62  GIDRKAKDYIDRIYRNRVFESERQTVTISPNG 93

Query: 209 245
           
Sbjct: 122 93

BLAST of CU112353 vs. NCBI nr
Match: gi|700190668|gb|KGN45872.1| (hypothetical protein Csa_6G016910 [Cucumis sativus])

HSP 1 Score: 105.5 bits (262), Expect = 4.4e-20
Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 2

Query: 86  METKIKKLRKNKYNFLHIGIRSIGMNSDSLTLGFEDTIFINPIDVIFGLSIDP 145
           METKIKKLRKNKYNFLHIGIRSIGMNSDSLTL FEDTIFINPIDVIFGLSIDP
Sbjct: 1   METKIKKLRKNKYNFLHIGIRSIGMNSDSLTLSFEDTIFINPIDVIFGLSIDP 53

Query: 146 205
           
Sbjct: 61  53

Query: 206 245
           
Sbjct: 121 53

BLAST of CU112353 vs. NCBI nr
Match: gi|700190669|gb|KGN45873.1| (hypothetical protein Csa_6G016905 [Cucumis sativus])

HSP 1 Score: 72.8 bits (177), Expect = 3.1e-10
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = -3

Query: 146 GIDRKAKDYIDRIYKNRVFETERQTVTIHPNGP 205
           GIDRKAKDYIDRIYKNRVFETERQTVTIHPNGP
Sbjct: 62  GIDRKAKDYIDRIYKNRVFETERQTVTIHPNGP 94

Query: 206 245
           
Sbjct: 122 94

BLAST of CU112353 vs. NCBI nr
Match: gi|700190665|gb|KGN45869.1| (hypothetical protein Csa_6G014890 [Cucumis sativus])

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-07
Identity = 29/32 (90.62%), Postives = 31/32 (96.88%), Query Frame = -3

Query: 149 GIDRKAKDYIDRIYKNRVFETERQTVTIHPNG 208
           GIDRKAKDYIDRIY+NRVFE+ERQTVTI PNG
Sbjct: 63  GIDRKAKDYIDRIYRNRVFESERQTVTISPNG 94

Query: 209 245
           
Sbjct: 123 94

BLAST of CU112353 vs. NCBI nr
Match: gi|700190663|gb|KGN45867.1| (hypothetical protein Csa_6G014870 [Cucumis sativus])

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-07
Identity = 29/32 (90.62%), Postives = 31/32 (96.88%), Query Frame = -3

Query: 149 GIDRKAKDYIDRIYKNRVFETERQTVTIHPNG 208
           GIDRKAKDYIDRIY+NRVFE+ERQTVTI PNG
Sbjct: 62  GIDRKAKDYIDRIYRNRVFESERQTVTISPNG 93

Query: 209 245
           
Sbjct: 122 93

BLAST of CU112353 vs. NCBI nr
Match: gi|700190666|gb|KGN45870.1| (hypothetical protein Csa_6G014900 [Cucumis sativus])

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-07
Identity = 29/32 (90.62%), Postives = 31/32 (96.88%), Query Frame = -3

Query: 149 GIDRKAKDYIDRIYKNRVFETERQTVTIHPNG 208
           GIDRKAKDYIDRIY+NRVFE+ERQTVTI PNG
Sbjct: 62  GIDRKAKDYIDRIYRNRVFESERQTVTISPNG 93

Query: 209 245
           
Sbjct: 122 93

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KBW6_CUCSA1.4e-2098.11Uncharacterized protein OS=Cucumis sativus GN=Csa_6G016910 PE=4 SV=1[more]
A0A0A0K8W0_CUCSA2.2e-10100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G016905 PE=4 SV=1[more]
A0A0A0KBW1_CUCSA1.0e-0790.63Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014870 PE=4 SV=1[more]
A0A0A0KAK6_CUCSA1.0e-0790.63Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014890 PE=4 SV=1[more]
A0A0A0K7Y2_CUCSA1.0e-0790.63Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014900 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700190668|gb|KGN45872.1|4.4e-2098.11hypothetical protein Csa_6G016910 [Cucumis sativus][more]
gi|700190669|gb|KGN45873.1|3.1e-10100.00hypothetical protein Csa_6G016905 [Cucumis sativus][more]
gi|700190665|gb|KGN45869.1|1.5e-0790.63hypothetical protein Csa_6G014890 [Cucumis sativus][more]
gi|700190663|gb|KGN45867.1|1.5e-0790.63hypothetical protein Csa_6G014870 [Cucumis sativus][more]
gi|700190666|gb|KGN45870.1|1.5e-0790.63hypothetical protein Csa_6G014900 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G016910Csa6G016910gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0012323G0012323EST
G0088985G0088985EST
H0026164H0026164EST