CU112054 (transcribed_cluster) Cucumber (Chinese Long) v2

Overview
NameCU112054
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 11602805 .. 11603035 (-)
Sequence length240
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

CGGCCGGGGAAGAGAATATGTTTTTTTTAGATTAGAATGGAATCCACTACAAATATGGTTCTCTTTTTTCTCCTTTCCAAGTTTATATATAACAGGTAATCTAAGAGCATACCCATTGTCATAGTGTGGCCTTGTCAGAGCTTTGAATGTCAGATATGATTTACAATGGCTCCGACTCCATTGGGCTGCTCATGCTAAATGCAAACGGCTATGACATTCCGGAGTTTCGGTTTCGTGAGC
Homology
[Close]
BLAST of CU112054 vs. TrEMBL
Match: A0A0A0KZF2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G293140 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.1e-06
Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 3 

Query: 147 MSDMIYNGSDSIGLLMLNANGYDIPEFRF 206
           MSDMIYNGSDSIGLLMLNANGYDIPEF F
Sbjct: 1   MSDMIYNGSDSIGLLMLNANGYDIPEFGF 29

Query: 207  234
           
Sbjct: 61   29

[Close]
BLAST of CU112054 vs. NCBI nr
Match: gi|700199046|gb|KGN54204.1| (hypothetical protein Csa_4G293140 [Cucumis sativus])

HSP 1 Score: 61.6 bits (148), Expect = 7.0e-07
Identity = 28/29 (96.55%), Postives = 28/29 (96.55%), Query Frame = 3 

Query: 147 MSDMIYNGSDSIGLLMLNANGYDIPEFRF 206
           MSDMIYNGSDSIGLLMLNANGYDIPEF F
Sbjct: 1   MSDMIYNGSDSIGLLMLNANGYDIPEFGF 29

Query: 207  234
           
Sbjct: 61   29

The following BLAST results are available for this feature:
BLAST of CU112054 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZF2_CUCSA1.1e-0696.55Uncharacterized protein OS=Cucumis sativus GN=Csa_4G293140 PE=4 SV=1[more]
BLAST of CU112054 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700199046|gb|KGN54204.1|7.0e-0796.55hypothetical protein Csa_4G293140 [Cucumis sativus][more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa4G293140Csa4G293140gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02N2LOVFKNP3UI02N2LOVEST
H0176712H0176712EST