CU111118 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU111118
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 20326576 .. 20326995 (+)
Sequence length352
The following sequences are available for this feature:

transcribed_cluster sequence

CCCCGTAGAGAGGAATCGATTACAGATTGCGTGGTCGGAAGTGGAAGGAATGAGGGAAAGATTGATTGAAGTCTTTGAAGGAGTCGAACCAAAGAGCTTTGGCCTTCTGATGAGAGAGACTTTGAAGATGGCGTTTTCGAGCAAAGGGAGTGTCTTGAAATTGCTTATCGCAGTAGTCGCAATAATATTTTCCCAATGGCATCTTCTTCTTCGATTCCTTCAGCCTTCTTCTTCGTCGTTCCAAAGCTTTCTTTAAAGCCTTTCTGTTTCCGATCAATTTCTCCTCCAATCTATCTTATGCTTTTTCCCCCACAATTTCTAAATTCTATTTGTTTTTCTTTATCCCCGGCCG
BLAST of CU111118 vs. Swiss-Prot
Match: C3H3_ORYSJ (Zinc finger CCCH domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=Os01g0252200 PE=2 SV=2)

HSP 1 Score: 76.6 bits (187), Expect = 2.0e-13
Identity = 30/43 (69.77%), Postives = 34/43 (79.07%), Query Frame = -1

Query: 74  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFK 133
           MPLGKYYCDYC+KQFQDTP ARKRHL    H +A+ALW+D+ +
Sbjct: 1   MPLGKYYCDYCEKQFQDTPAARKRHLDGAQHHRARALWYDAVR 43

Query: 134 193
           
Sbjct: 61  43

Query: 194 203
           
Sbjct: 121 43

BLAST of CU111118 vs. Swiss-Prot
Match: ZMAT5_BOVIN (Zinc finger matrin-type protein 5 OS=Bos taurus GN=ZMAT5 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-08
Identity = 23/40 (57.50%), Postives = 27/40 (67.50%), Query Frame = -1

Query: 71  KYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKD 130
           +Y+CDYCD+ FQD    RK+HL  L H KAK LW+D F+D
Sbjct: 4   RYFCDYCDRSFQDNLHNRKKHLNGLQHLKAKKLWYDMFRD 43

Query: 131 190
           
Sbjct: 64  43

BLAST of CU111118 vs. Swiss-Prot
Match: ZMAT5_DANRE (Zinc finger matrin-type protein 5 OS=Danio rerio GN=zmat5 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.1e-08
Identity = 22/40 (55.00%), Postives = 27/40 (67.50%), Query Frame = -1

Query: 71  KYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKD 130
           +YYCDYCD+ FQD    RK+HL  + H +AK  WFD+F+D
Sbjct: 4   RYYCDYCDRSFQDNLHNRKKHLNGVQHHRAKKAWFDNFRD 43

Query: 131 190
           
Sbjct: 64  43

BLAST of CU111118 vs. Swiss-Prot
Match: ZMAT5_HUMAN (Zinc finger matrin-type protein 5 OS=Homo sapiens GN=ZMAT5 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.5e-08
Identity = 22/40 (55.00%), Postives = 27/40 (67.50%), Query Frame = -1

Query: 71  KYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKD 130
           +Y+CDYCD+ FQD    RK+HL  L H KAK +W+D F+D
Sbjct: 4   RYFCDYCDRSFQDNLHNRKKHLNGLQHLKAKKVWYDMFRD 43

Query: 131 190
           
Sbjct: 64  43

BLAST of CU111118 vs. Swiss-Prot
Match: ZMAT5_MOUSE (Zinc finger matrin-type protein 5 OS=Mus musculus GN=Zmat5 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.5e-08
Identity = 22/40 (55.00%), Postives = 27/40 (67.50%), Query Frame = -1

Query: 71  KYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKD 130
           +Y+CDYCD+ FQD    RK+HL  L H KAK +W+D F+D
Sbjct: 4   RYFCDYCDRSFQDNLHNRKKHLNGLQHLKAKKVWYDMFRD 43

Query: 131 190
           
Sbjct: 64  43

BLAST of CU111118 vs. TrEMBL
Match: A0A0A0M1B0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560650 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.6e-28
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = -1

Query: 29  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPR 88
           MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPR
Sbjct: 1   MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPR 58

Query: 89  148
           
Sbjct: 61  58

Query: 149 203
           
Sbjct: 121 58

BLAST of CU111118 vs. TrEMBL
Match: W9RHS5_9ROSA (Zinc finger CCCH domain-containing protein 3 OS=Morus notabilis GN=L484_001153 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 5.4e-18
Identity = 42/53 (79.25%), Postives = 46/53 (86.79%), Query Frame = -1

Query: 44  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSF 103
           MPLGKYYCDYCDKQFQDTPFARKRHLQ L H +AKALW+DSFKD NQ++   F
Sbjct: 1   MPLGKYYCDYCDKQFQDTPFARKRHLQGLQHLRAKALWYDSFKDPNQAYTDGF 53

Query: 104 163
           
Sbjct: 61  53

Query: 164 203
           
Sbjct: 121 53

BLAST of CU111118 vs. TrEMBL
Match: D7UA82_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g00610 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.0e-16
Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = -1

Query: 62  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQ 121
           MPLGKY+CDYCDKQFQDTP ARKRHLQ L HQ+AKALW+DSF+D NQ
Sbjct: 1   MPLGKYHCDYCDKQFQDTPSARKRHLQGLQHQRAKALWYDSFRDPNQ 47

Query: 122 181
           
Sbjct: 61  47

Query: 182 203
           
Sbjct: 121 47

BLAST of CU111118 vs. TrEMBL
Match: V4SWC1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012993mg PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.0e-16
Identity = 38/53 (71.70%), Postives = 44/53 (83.02%), Query Frame = -1

Query: 44  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSF 103
           MPLGKYYCDYCDKQFQDT FARKRHLQ + H +AKALW+DS  + NQ++P  F
Sbjct: 1   MPLGKYYCDYCDKQFQDTYFARKRHLQGIQHLRAKALWYDSLNETNQTYPDGF 53

Query: 104 163
           
Sbjct: 61  53

Query: 164 203
           
Sbjct: 121 53

BLAST of CU111118 vs. TrEMBL
Match: A0A067E275_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026840mg PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.0e-16
Identity = 38/53 (71.70%), Postives = 44/53 (83.02%), Query Frame = -1

Query: 44  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSF 103
           MPLGKYYCDYCDKQFQDT FARKRHLQ + H +AKALW+DS  + NQ++P  F
Sbjct: 1   MPLGKYYCDYCDKQFQDTYFARKRHLQGIQHLRAKALWYDSLNETNQTYPDGF 53

Query: 104 163
           
Sbjct: 61  53

Query: 164 203
           
Sbjct: 121 53

BLAST of CU111118 vs. NCBI nr
Match: gi|449435572|ref|XP_004135569.1| (PREDICTED: zinc finger CCCH domain-containing protein 3 [Cucumis sativus])

HSP 1 Score: 132.5 bits (332), Expect = 4.8e-28
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = -1

Query: 29  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPR 88
           MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPR
Sbjct: 1   MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPR 58

Query: 89  148
           
Sbjct: 61  58

Query: 149 203
           
Sbjct: 121 58

BLAST of CU111118 vs. NCBI nr
Match: gi|659099282|ref|XP_008450521.1| (PREDICTED: zinc finger CCCH domain-containing protein 3 [Cucumis melo])

HSP 1 Score: 128.3 bits (321), Expect = 9.1e-27
Identity = 56/58 (96.55%), Postives = 57/58 (98.28%), Query Frame = -1

Query: 29  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSFHFRPR 88
           MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKD NQ+FPHSFHFRPR
Sbjct: 1   MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDSNQTFPHSFHFRPR 58

Query: 89  148
           
Sbjct: 61  58

Query: 149 203
           
Sbjct: 121 58

BLAST of CU111118 vs. NCBI nr
Match: gi|703106123|ref|XP_010098420.1| (Zinc finger CCCH domain-containing protein 3 [Morus notabilis])

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-17
Identity = 42/53 (79.25%), Postives = 46/53 (86.79%), Query Frame = -1

Query: 44  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQSFPHSF 103
           MPLGKYYCDYCDKQFQDTPFARKRHLQ L H +AKALW+DSFKD NQ++   F
Sbjct: 1   MPLGKYYCDYCDKQFQDTPFARKRHLQGLQHLRAKALWYDSFKDPNQAYTDGF 53

Query: 104 163
           
Sbjct: 61  53

Query: 164 203
           
Sbjct: 121 53

BLAST of CU111118 vs. NCBI nr
Match: gi|731415967|ref|XP_010659728.1| (PREDICTED: zinc finger CCCH domain-containing protein 3 isoform X1 [Vitis vinifera])

HSP 1 Score: 91.7 bits (226), Expect = 9.4e-16
Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = -1

Query: 62  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQ 121
           MPLGKY+CDYCDKQFQDTP ARKRHLQ L HQ+AKALW+DSF+D NQ
Sbjct: 1   MPLGKYHCDYCDKQFQDTPSARKRHLQGLQHQRAKALWYDSFRDPNQ 47

Query: 122 181
           
Sbjct: 61  47

Query: 182 203
           
Sbjct: 121 47

BLAST of CU111118 vs. NCBI nr
Match: gi|731415971|ref|XP_010659729.1| (PREDICTED: zinc finger CCCH domain-containing protein 3 isoform X2 [Vitis vinifera])

HSP 1 Score: 91.7 bits (226), Expect = 9.4e-16
Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = -1

Query: 62  MPLGKYYCDYCDKQFQDTPFARKRHLQSLSHQKAKALWFDSFKDFNQ 121
           MPLGKY+CDYCDKQFQDTP ARKRHLQ L HQ+AKALW+DSF+D NQ
Sbjct: 1   MPLGKYHCDYCDKQFQDTPSARKRHLQGLQHQRAKALWYDSFRDPNQ 47

Query: 122 181
           
Sbjct: 61  47

Query: 182 203
           
Sbjct: 121 47

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
C3H3_ORYSJ2.0e-1369.77Zinc finger CCCH domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=... [more]
ZMAT5_BOVIN1.1e-0857.50Zinc finger matrin-type protein 5 OS=Bos taurus GN=ZMAT5 PE=2 SV=1[more]
ZMAT5_DANRE1.1e-0855.00Zinc finger matrin-type protein 5 OS=Danio rerio GN=zmat5 PE=2 SV=1[more]
ZMAT5_HUMAN2.5e-0855.00Zinc finger matrin-type protein 5 OS=Homo sapiens GN=ZMAT5 PE=1 SV=1[more]
ZMAT5_MOUSE2.5e-0855.00Zinc finger matrin-type protein 5 OS=Mus musculus GN=Zmat5 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0M1B0_CUCSA2.6e-28100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560650 PE=4 SV=1[more]
W9RHS5_9ROSA5.4e-1879.25Zinc finger CCCH domain-containing protein 3 OS=Morus notabilis GN=L484_001153 P... [more]
D7UA82_VITVI5.0e-1682.98Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g00610 PE=4 SV=... [more]
V4SWC1_9ROSI5.0e-1671.70Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012993mg PE=4 SV=1[more]
A0A067E275_CITSI5.0e-1671.70Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026840mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449435572|ref|XP_004135569.1|4.8e-28100.00PREDICTED: zinc finger CCCH domain-containing protein 3 [Cucumis sativus][more]
gi|659099282|ref|XP_008450521.1|9.1e-2796.55PREDICTED: zinc finger CCCH domain-containing protein 3 [Cucumis melo][more]
gi|703106123|ref|XP_010098420.1|1.3e-1779.25Zinc finger CCCH domain-containing protein 3 [Morus notabilis][more]
gi|731415967|ref|XP_010659728.1|9.4e-1682.98PREDICTED: zinc finger CCCH domain-containing protein 3 isoform X1 [Vitis vinife... [more]
gi|731415971|ref|XP_010659729.1|9.4e-1682.98PREDICTED: zinc finger CCCH domain-containing protein 3 isoform X2 [Vitis vinife... [more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G560650Csa1G560650gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02M03R2FKNP3UI02M03R2EST
FKNP3UI02OFSE1FKNP3UI02OFSE1EST
H0102042H0102042EST