CU106968 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU106968
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 27606352 .. 27606802 (-)
Sequence length463
The following sequences are available for this feature:

transcribed_cluster sequence

GTCGACGGGGGGGAAACAAAATTTTTTATCATTAGCAACTAAGATATCGCGTGTGGCGTGGGAAGAAAGAAGATGAAGTCATGGTTGATATGTGTGGTGTTTATTAGCATGTTGGTGATGAGCCAAGAAGTTGGAGCACAGACAAACCATCTTAAAATTTCCTAATCCATGCGATCTTCCTTCTCCACCTCCAAGTTGTTCGTCAAAAGTTAAAGATCATGCTCCTACTAATCCCTATGATAGAGGTTGCTCTGCAATTCATCGATGTCGTGGAGATTGATGTCATTCAATATCAAGAGGTCTACTTCTGTCAAATATTCGAGAGAGAGAAAATAAAGATCATACATTTACCTATACTATTACATTCTTATGTGGTTAATGTAATCTTGTATTTATTCCCATGCTTCCCCATTCTATTATTTAAATAATATTTAAAAATAAATTATGAAAATTACTATTTTTT
BLAST of CU106968 vs. TrEMBL
Match: A0A0A0M0X3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690160 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.7e-11
Identity = 33/42 (78.57%), Postives = 33/42 (78.57%), Query Frame = 2

Query: 152 LKFPNPCDLXXXXXXXXXKVKDHAPTNPYDRGCSAIHRCRGD 211
           LKFPNPCDL         KVKDHAPTNPYDRGCSAIHRCRGD
Sbjct: 27  LKFPNPCDLPSPPPSCSSKVKDHAPTNPYDRGCSAIHRCRGD 68

Query: 212 271
           
Sbjct: 87  68

Query: 272 278
           
Sbjct: 147 68

BLAST of CU106968 vs. TrEMBL
Match: A0A0A0M0X3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690160 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.6e-06
Identity = 28/28 (100.00%), Postives = 28/28 (100.00%), Query Frame = 1

Query: 73  MKSWLICVVFISMLVMSQEVGAQTNHLK 132
           MKSWLICVVFISMLVMSQEVGAQTNHLK
Sbjct: 1   MKSWLICVVFISMLVMSQEVGAQTNHLK 28

Query: 133 157
           
Sbjct: 61  28

BLAST of CU106968 vs. NCBI nr
Match: gi|700211681|gb|KGN66777.1| (hypothetical protein Csa_1G690160 [Cucumis sativus])

HSP 1 Score: 77.4 bits (189), Expect = 2.4e-11
Identity = 33/42 (78.57%), Postives = 33/42 (78.57%), Query Frame = 2

Query: 152 LKFPNPCDLXXXXXXXXXKVKDHAPTNPYDRGCSAIHRCRGD 211
           LKFPNPCDL         KVKDHAPTNPYDRGCSAIHRCRGD
Sbjct: 27  LKFPNPCDLPSPPPSCSSKVKDHAPTNPYDRGCSAIHRCRGD 68

Query: 212 271
           
Sbjct: 87  68

Query: 272 278
           
Sbjct: 147 68

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0M0X3_CUCSA3.7e-1178.57Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690160 PE=4 SV=1[more]
A0A0A0M0X3_CUCSA3.6e-06100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690160 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700211681|gb|KGN66777.1|2.4e-1178.57hypothetical protein Csa_1G690160 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G690160Csa1G690160gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
G0003524G0003524EST
G0021432G0021432EST
G0092134G0092134EST
G0116692G0116692EST
G0119647G0119647EST
G0142424G0142424EST
G0187715G0187715EST
G0200712G0200712EST
H0015944H0015944EST
H0032611H0032611EST
H0050550H0050550EST
H0077733H0077733EST
H0098288H0098288EST
H0124132H0124132EST
H0134986H0134986EST
H0148265H0148265EST
H0163904H0163904EST
H0170061H0170061EST