CU103680 (transcribed_cluster) Cucumber (Chinese Long) v2

Overview
NameCU103680
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr2 : 6170579 .. 6171593 (+)
Sequence length640
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

CGGCCGGGGGGAAGAAGATCCGAACCATTGGATTCTCTCTCAGATCCAAATCGTTCGATTCATTCTCTCTTTCTCTCTCTCTCTGGTTCGTTTCCTTTACCTATGAGCTTCCAGAGCTCAACCCAATGGAGAGGAGAGAGATAGACACACAATCACACTGACCAAACCTCACACCACACCCACCACCCACCCTCCAATTTCCCCGATTTTCTTGCGATTTGGGGTTTCTGATTGCTTCATTGTGTGGCAGAAGGCAGCAGAGTTTGAGATCAGGCTGTTTGTGTGGTGTCTGTCAGTTCAGTTAGCTGCTGAAAATGGTCGAGATTTGAGGACGACGAAGTTATGTGAGTTATCTGATTTGAGGCTCTTTCGGTTGTCTAGCTACTGACGGGTGATTCTCAGAGAATCTCTTGCTGGGAAATGCCTAATGTCTGCTGGTTTTTTAGTTAAGCCCTAGAAATTACTTCTGCATCTCGAGCTGGGAACTGAAGGAAAAATTCCTGTTCAGCTCGAGATCTGACTTTTGAGTTTCTCCCAAAAATGAGAGTAGTGGTGATTTAGGAATTAGCAATAGAGATATACAAGAGCCAAACATCAATGGATGATTTTTCAAAATACTCCCATAGTCCAGCTCATCTAG
Homology
[Close]
BLAST of CU103680 vs. TrEMBL
Match: A0A0A0LH52_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G075390 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.0e-23
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 2 

Query: 218 FGVSDCFIVWQKAAEFEIRLFVWCLSVQLAAENGRDLRTTKLCELSDLRLFRLSSY 277
           FGVSDCFIVWQKAAEFEIRLFVWCLSVQLAAENGRDLRTTKLCELSDLRLFRLSSY
Sbjct: 30  FGVSDCFIVWQKAAEFEIRLFVWCLSVQLAAENGRDLRTTKLCELSDLRLFRLSSY 85

Query: 278  337
           
Sbjct: 90   85

Query: 338  386
           
Sbjct: 150  85

[Close]
BLAST of CU103680 vs. NCBI nr
Match: gi|700206161|gb|KGN61280.1| (hypothetical protein Csa_2G075390 [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 2.9e-23
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 2 

Query: 218 FGVSDCFIVWQKAAEFEIRLFVWCLSVQLAAENGRDLRTTKLCELSDLRLFRLSSY 277
           FGVSDCFIVWQKAAEFEIRLFVWCLSVQLAAENGRDLRTTKLCELSDLRLFRLSSY
Sbjct: 30  FGVSDCFIVWQKAAEFEIRLFVWCLSVQLAAENGRDLRTTKLCELSDLRLFRLSSY 85

Query: 278  337
           
Sbjct: 90   85

Query: 338  386
           
Sbjct: 150  85

The following BLAST results are available for this feature:
BLAST of CU103680 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LH52_CUCSA2.0e-23100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G075390 PE=4 SV=1[more]
BLAST of CU103680 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206161|gb|KGN61280.1|2.9e-23100.00hypothetical protein Csa_2G075390 [Cucumis sativus][more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa2G075390Csa2G075390gene
Csa2G075400Csa2G075400gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02K231MFKNP3UI02K231MEST
FKNP3UI02KW8GPFKNP3UI02KW8GPEST
FKNP3UI02L9J4NFKNP3UI02L9J4NEST
FKNP3UI02M0WNCFKNP3UI02M0WNCEST
FKNP3UI02MWCUXFKNP3UI02MWCUXEST
FKNP3UI02NSPYQFKNP3UI02NSPYQEST
FKNP3UI02OH1C2FKNP3UI02OH1C2EST
FKNP3UI02OJY31FKNP3UI02OJY31EST
FKNP3UI02OOG0GFKNP3UI02OOG0GEST
G0102086G0102086EST
G0116317G0116317EST
H0132618H0132618EST