CU103612 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU103612
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionProtein FAM32A-like
LocationChr3 : 25054413 .. 25061630 (-)
Sequence length572
The following sequences are available for this feature:

transcribed_cluster sequence

GAGCCTCGTCTTGACGAAGTAGGGCAGAACAAAGCAAAAGAATCTGAAGTTGGAGTGGAGTGGCTGACTGAACTGGAGGGGACCGGAGCAGCGCGGAACTGGGCGTCGGATCTGAGCGTCGTTGAATCTGAGGGGAACTGAGCGTCATCGAACGGATCGGCGGATCTGAGTAACACGAACTGGGAGTCTTCAAACGGAACGAGTCGGGTACGGGTCGTCTGGTCAGAGTTCGTGAAGATTGAGGGGGCGACGGCTAGGCAATGTCTTCCTACGATAATGTTGTTGGTGGGAAGTTGAAGCTTAAAGGGAAAGCTCTTGATGTGAAAGTAGGTGGGGTGAAGAAGAAAAAGAAACTTAAAAAGAATCAAGATCAAATATCTCGAGAACTGGAAAATGAGCATCCAGCAGGAGGAAGTGCTGCAAGTGGTGAAGAGCCAAGTGATGCGAATGAGGAAGAAATAGATGAAGCCAACAAGTCAAACTGAAGAAGGGAAGGTTCCTCACTATGATGATCATCTAACACCGGCGGAAAGACGTTATACTGAACAGAAGGAGAGAATTGATGTTCATAG
BLAST of CU103612 vs. TrEMBL
Match: A0A0A0L997_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G640600 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-19
Identity = 56/73 (76.71%), Postives = 57/73 (78.08%), Query Frame = -1

Query: 3   QTTRTRLVPFEDSQFVLLRSADPFDDAQFPSDSTTLRSDAQFRAAXXXXXXXXXXXXXXX 62
           +TTRTRLVPFEDSQFVLLRSADPFDDAQFPSDSTTLRSDAQFRAA               
Sbjct: 7   KTTRTRLVPFEDSQFVLLRSADPFDDAQFPSDSTTLRSDAQFRAA-PVPSSSVSHSTPTQ 66

Query: 63  XFALFCPTSSRRG 122
            FALFCPTSSRRG
Sbjct: 67  IFALFCPTSSRRG 78

Query: 123 182
           
Sbjct: 127 78

Query: 183 222
           
Sbjct: 187 78

BLAST of CU103612 vs. TrEMBL
Match: A0A0A0LE92_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G640580 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.8e-08
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1

Query: 481 TEEGKVPHYDDHLTPAERRYTEQKERIDVH 540
           TEEGKVPHYDDHLTPAERRY EQKERIDVH
Sbjct: 39  TEEGKVPHYDDHLTPAERRYIEQKERIDVH 68

Query: 541 571
           
Sbjct: 99  68

BLAST of CU103612 vs. TrEMBL
Match: A0A0A0LE92_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G640580 PE=4 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.1e-03
Identity = 24/24 (100.00%), Postives = 24/24 (100.00%), Query Frame = 3

Query: 408 GGSAASGEEPSDANEEEIDEANKS 467
           GGSAASGEEPSDANEEEIDEANKS
Sbjct: 15  GGSAASGEEPSDANEEEIDEANKS 38

Query: 468 480
           
Sbjct: 75  38


HSP 2 Score: 60.1 bits (144), Expect = 3.4e-06
Identity = 25/29 (86.21%), Postives = 26/29 (89.66%), Query Frame = 1

Query: 484 EEGKVPHYDDHLTPAERRYTEQKERIDVH 543
           EEGK PHYDDHLTPAERRY EQ+ERID H
Sbjct: 72  EEGKAPHYDDHLTPAERRYIEQRERIDTH 100

Query: 544 571
           
Sbjct: 132 100

BLAST of CU103612 vs. NCBI nr
Match: gi|700203285|gb|KGN58418.1| (hypothetical protein Csa_3G640600 [Cucumis sativus])

HSP 1 Score: 104.4 bits (259), Expect = 2.3e-19
Identity = 56/73 (76.71%), Postives = 57/73 (78.08%), Query Frame = -1

Query: 3   QTTRTRLVPFEDSQFVLLRSADPFDDAQFPSDSTTLRSDAQFRAAXXXXXXXXXXXXXXX 62
           +TTRTRLVPFEDSQFVLLRSADPFDDAQFPSDSTTLRSDAQFRAA               
Sbjct: 7   KTTRTRLVPFEDSQFVLLRSADPFDDAQFPSDSTTLRSDAQFRAA-PVPSSSVSHSTPTQ 66

Query: 63  XFALFCPTSSRRG 122
            FALFCPTSSRRG
Sbjct: 67  IFALFCPTSSRRG 78

Query: 123 182
           
Sbjct: 127 78

Query: 183 222
           
Sbjct: 187 78

BLAST of CU103612 vs. NCBI nr
Match: gi|449453340|ref|XP_004144416.1| (PREDICTED: protein FAM32A [Cucumis sativus])

HSP 1 Score: 77.8 bits (190), Expect = 2.3e-11
Identity = 45/73 (61.64%), Postives = 45/73 (61.64%), Query Frame = 3

Query: 261 MSSYDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQDQISRELENEHPAGGSAASGEEPS 320
           MSSYDN                            NQDQISRELENEHPAGGSAASGEEPS
Sbjct: 1   MSSYDNVVGGKLKLKGKALDVKVGGVKKKKKLKKNQDQISRELENEHPAGGSAASGEEPS 60

Query: 321 DANEEEIDEANKS 380
           DANEEEIDEANKS
Sbjct: 61  DANEEEIDEANKS 73

Query: 381 440
           
Sbjct: 121 73

Query: 441 480
           
Sbjct: 181 73

BLAST of CU103612 vs. NCBI nr
Match: gi|659130305|ref|XP_008465099.1| (PREDICTED: protein FAM32A [Cucumis melo])

HSP 1 Score: 74.7 bits (182), Expect = 1.9e-10
Identity = 43/73 (58.90%), Postives = 45/73 (61.64%), Query Frame = 3

Query: 261 MSSYDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQDQISRELENEHPAGGSAASGEEPS 320
           MSSYDN                            N+DQISRELENEHPAGGSAASGEEPS
Sbjct: 1   MSSYDNVVGGKLKLKGKALDVKVGGVKKKKKLKKNEDQISRELENEHPAGGSAASGEEPS 60

Query: 321 DANEEEIDEANKS 380
           DANEEEI+EANKS
Sbjct: 61  DANEEEINEANKS 73

Query: 381 440
           
Sbjct: 121 73

Query: 441 480
           
Sbjct: 181 73

BLAST of CU103612 vs. NCBI nr
Match: gi|700203283|gb|KGN58416.1| (hypothetical protein Csa_3G640580 [Cucumis sativus])

HSP 1 Score: 64.7 bits (156), Expect = 2.0e-07
Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 1

Query: 481 TEEGKVPHYDDHLTPAERRYTEQKERIDVH 540
           TEEGKVPHYDDHLTPAERRY EQKERIDVH
Sbjct: 39  TEEGKVPHYDDHLTPAERRYIEQKERIDVH 68

Query: 541 571
           
Sbjct: 99  68

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L997_CUCSA1.2e-1976.71Uncharacterized protein OS=Cucumis sativus GN=Csa_3G640600 PE=4 SV=1[more]
A0A0A0LE92_CUCSA4.8e-0896.67Uncharacterized protein OS=Cucumis sativus GN=Csa_3G640580 PE=4 SV=1[more]
A0A0A0LE92_CUCSA2.1e-03100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G640580 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700203285|gb|KGN58418.1|2.3e-1976.71hypothetical protein Csa_3G640600 [Cucumis sativus][more]
gi|449453340|ref|XP_004144416.1|2.3e-1161.64PREDICTED: protein FAM32A [Cucumis sativus][more]
gi|659130305|ref|XP_008465099.1|1.9e-1058.90PREDICTED: protein FAM32A [Cucumis melo][more]
gi|700203283|gb|KGN58416.1|2.0e-0796.67hypothetical protein Csa_3G640580 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa3G640590Csa3G640590gene
Csa3G640580Csa3G640580gene
Csa3G640600Csa3G640600gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02L95XZFKNP3UI02L95XZEST
FKNP3UI02L9EUXFKNP3UI02L9EUXEST
FKNP3UI02MDJGVFKNP3UI02MDJGVEST
FKNP3UI02MRTR5FKNP3UI02MRTR5EST
FKNP3UI02OJDB4FKNP3UI02OJDB4EST
FKNP3UI02OK72OFKNP3UI02OK72OEST
G0006703G0006703EST
G0020248G0020248EST
G0053446G0053446EST
G0078299G0078299EST
G0094063G0094063EST
G0123172G0123172EST
G0136114G0136114EST
G0137673G0137673EST
G0178546G0178546EST
G0194481G0194481EST
H0044962H0044962EST
H0057277H0057277EST
H0060276H0060276EST
H0080609H0080609EST
H0085802H0085802EST
H0105190H0105190EST
H0135746H0135746EST
H0144765H0144765EST
H0147414H0147414EST
H0149446H0149446EST
H0177261H0177261EST
H0184731H0184731EST