CU103358 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU103358
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 9317076 .. 9317661 (-)
Sequence length587
The following sequences are available for this feature:

transcribed_cluster sequence

GCTCGCGTGTTGGTTCTTTTATGATTTATCTACTGTTATTTTGTTGTTGGATTCAATTTGTAGAACGTCTTGTTTAGTTTTTATTGGATTTTAGGGTTCCGTTTGATGCGATTAAGATGGATCGAAGCGCGTGTTTTTAGACGTTATGTCAATTAATTTTCGATGGATGTGGAACGAGGTTATGTCTGTGGTAACGGTGGATATGAAGCGTCAAACCGCACTGCAGACACTTTCTGACATAAGGATCCTGTTCTCTTTCCTTTTTATATTTTGGAGATTTATGTATTCCATTGAAATATGAACTCGGTTACTAGTTTTGAAGTCAAGGTATTTCCTCTGATGAATGGGTGTTTTCTCTCTCCGAGGTTTGGAAATCCTTTGGAAGATGCAGGCCTTGTAATCTTTGGTCTGCTTAACGAACGCTACGCTCAATGTTTTGATGTCCATAAACTGTTTTTTTGTGGAATTAGCAACCCTGTGGATGACAACGCGTTCTTTTGAGCATCTGAAATTCTTTAATAAAGGGGAGTTGTTTACTTTGAGAAACCTACTTAAAGTTAACCAGATATTTGTTGTGCTCATCTTAA
BLAST of CU103358 vs. TrEMBL
Match: A0A0A0LVI3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G126040 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.5e-17
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 1

Query: 367 FGNPLEDAGLVIFGLLNERYAQCFDVHKLFFCGISNPVDDNAFF 426
           FGNPLEDAGLVIFGLLNERYAQCFDVHKLFFCGISNPVDDNAFF
Sbjct: 29  FGNPLEDAGLVIFGLLNERYAQCFDVHKLFFCGISNPVDDNAFF 72

Query: 427 486
           
Sbjct: 89  72

Query: 487 499
           
Sbjct: 149 72

BLAST of CU103358 vs. TrEMBL
Match: A0A0A0LVI3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G126040 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.6e-06
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 2

Query: 167 MWNEVMSVVTVDMKRQTALQTLSDIRILF 226
           MWNEVMSVVTVDMKRQTALQTLSDIRILF
Sbjct: 1   MWNEVMSVVTVDMKRQTALQTLSDIRILF 29

Query: 227 254
           
Sbjct: 61  29

BLAST of CU103358 vs. NCBI nr
Match: gi|700209746|gb|KGN64842.1| (hypothetical protein Csa_1G126040 [Cucumis sativus])

HSP 1 Score: 100.9 bits (250), Expect = 2.6e-18
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 1

Query: 367 FGNPLEDAGLVIFGLLNERYAQCFDVHKLFFCGISNPVDDNAFF 426
           FGNPLEDAGLVIFGLLNERYAQCFDVHKLFFCGISNPVDDNAFF
Sbjct: 29  FGNPLEDAGLVIFGLLNERYAQCFDVHKLFFCGISNPVDDNAFF 72

Query: 427 486
           
Sbjct: 89  72

Query: 487 499
           
Sbjct: 149 72

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LVI3_CUCSA1.5e-17100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G126040 PE=4 SV=1[more]
A0A0A0LVI3_CUCSA4.6e-06100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G126040 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700209746|gb|KGN64842.1|2.6e-18100.00hypothetical protein Csa_1G126040 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa1G126040Csa1G126040gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02K5Z3TFKNP3UI02K5Z3TEST
FKNP3UI02KP8L6FKNP3UI02KP8L6EST
FKNP3UI02LWOAEFKNP3UI02LWOAEEST
FKNP3UI02MSHLPFKNP3UI02MSHLPEST
FKNP3UI02OH1TMFKNP3UI02OH1TMEST
G0069901G0069901EST
G0082815G0082815EST
G0107789G0107789EST
H0087981H0087981EST
H0097033H0097033EST
H0097183H0097183EST
H0098109H0098109EST